Gene annotation
Transcriptome id Sobic.007G155300.1
Synonym HEC1, Sb07g022920
Functional annotation SAG (Senescence-associated gene): differentially expressed gene during developmental senescence. (PubMedID : 27586543)
bHelix-loop-helix transcription factor, putative, expressed
UniProt C5YM98
Pfam PF00010
Panther DB PTHR12565 PTHR12565:SF161
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G50330 : basic helix-loop-helix (bHLH) DNA-binding superfamily protein
RAP-DB (Rice) LOC_Os08g36740.1 : bHelix-loop-helix transcription factor, putative, expressed
MaizeGDB (Corn) Zm00025a030637 , Zm00025a047240 , Zm00025a005410 , Zm00025a014024 , Zm00025a040175 , Zm00025a026998
Brachypodium KQK09409 , KQK10418 , KQJ90506 , KQJ98652
Barley HORVU5Hr1G068110.2 , HORVU5Hr1G068110.1 , HORVU3Hr1G087710.1 , HORVU7Hr1G054880.1 , HORVU7Hr1G054880.2
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G018900 terpene synthase, putative, expressed K15086: (3S)-linalool synthase
2 Sobic.008G080600 Os4bglu12 - beta-glucosidase, exo-beta-glucanase, expressed K01188: beta-glucosidase
3 Sobic.008G067200 inhibitor I family protein, putative, expressed -
4 Sobic.006G027500 terpene synthase, putative, expressed -
5 Sobic.010G171900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@L-ascorbate oxidase (Os)(PubMedID : 27208977)@L-ascorbate oxidase precursor, putative, expressed -
6 Sobic.008G080400 "cyanogenic beta-glucosidase dhurrinase, up-regulated under drought stress "(PubMedID : 24655390)@Os6bglu24 - beta-glucosidase homologue, similar to G. max isohydroxyurate hydrolase, expressed K01188: beta-glucosidase
7 Sobic.009G254600 hydrolase, alpha/beta fold family domain containing protein, expressed -
8 Sobic.010G038500 GDSL-like lipase/acylhydrolase, putative, expressed -
9 Sobic.005G118300 plastocyanin-like domain containing protein, putative, expressed -
10 Sobic.008G036300 Ser/Thr protein phosphatase family protein, putative, expressed -
11 Sobic.004G182700 OsFBK8 - F-box domain and kelch repeat containing protein, expressed -
12 Sobic.003G131000 expressed protein -
13 Sobic.008G081200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@peptide transporter PTR3-A, putative, expressed -
14 Sobic.005G202600 tropinone reductase 2, putative, expressed -
15 Sobic.004G245300 - -
16 Sobic.002G233300 Cupredoxin superfamily protein(PubMedID : 26465154)@plastocyanin-like domain containing protein, putative, expressed -
17 Sobic.001G377500 POEI47 - Pollen Ole e I allergen and extensin family protein precursor, expressed -
18 Sobic.002G168150 - -
19 Sobic.003G310400 polyphenol oxidase, putative, expressed K00422: polyphenol oxidase
20 Sobic.007G133900 terpene synthase, putative, expressed -


Gene co-expression network
sample Sobic007G155300 Sobic007G155300 Sobic004G018900 Sobic004G018900 Sobic007G155300--Sobic004G018900 Sobic008G080600 Sobic008G080600 Sobic007G155300--Sobic008G080600 Sobic008G067200 Sobic008G067200 Sobic007G155300--Sobic008G067200 Sobic006G027500 Sobic006G027500 Sobic007G155300--Sobic006G027500 Sobic010G171900 Sobic010G171900 Sobic007G155300--Sobic010G171900 Sobic008G080400 Sobic008G080400 Sobic007G155300--Sobic008G080400 Sobic009G254600 Sobic009G254600 Sobic007G155300--Sobic009G254600 Sobic010G038500 Sobic010G038500 Sobic007G155300--Sobic010G038500 Sobic005G118300 Sobic005G118300 Sobic007G155300--Sobic005G118300 Sobic004G018900--Sobic010G171900 Sobic004G018900--Sobic006G027500 Sobic005G186500 Sobic005G186500 Sobic004G018900--Sobic005G186500 Sobic004G018900--Sobic008G080600 Sobic004G245300 Sobic004G245300 Sobic004G018900--Sobic004G245300 Sobic008G060200 Sobic008G060200 Sobic004G018900--Sobic008G060200 Sobic005G065500 Sobic005G065500 Sobic004G018900--Sobic005G065500 Sobic006G180800 Sobic006G180800 Sobic004G018900--Sobic006G180800 Sobic004G019100 Sobic004G019100 Sobic004G018900--Sobic004G019100 Sobic008G080600--Sobic006G027500 Sobic008G080600--Sobic010G171900 Sobic008G036300 Sobic008G036300 Sobic008G080600--Sobic008G036300 Sobic008G080600--Sobic008G080400 Sobic008G080600--Sobic004G018900 Sobic004G182700 Sobic004G182700 Sobic008G080600--Sobic004G182700 Sobic005G167500 Sobic005G167500 Sobic008G080600--Sobic005G167500 Sobic008G080600--Sobic005G186500 Sobic005G192600 Sobic005G192600 Sobic008G080600--Sobic005G192600 Sobic008G067200--Sobic008G080400 Sobic003G069100 Sobic003G069100 Sobic008G067200--Sobic003G069100 Sobic004G026300 Sobic004G026300 Sobic008G067200--Sobic004G026300 Sobic003G131000 Sobic003G131000 Sobic008G067200--Sobic003G131000 Sobic008G067200--Sobic004G182700 Sobic010G019700 Sobic010G019700 Sobic008G067200--Sobic010G019700 Sobic003G342300 Sobic003G342300 Sobic008G067200--Sobic003G342300 Sobic008G030200 Sobic008G030200 Sobic008G067200--Sobic008G030200 Sobic008G081200 Sobic008G081200 Sobic008G067200--Sobic008G081200 Sobic006G027500--Sobic010G171900 Sobic006G027500--Sobic004G018900 Sobic006G027500--Sobic005G186500 Sobic006G027500--Sobic008G080600 Sobic006G007100 Sobic006G007100 Sobic006G027500--Sobic006G007100 Sobic006G027500--Sobic004G019100 Sobic006G005400 Sobic006G005400 Sobic006G027500--Sobic006G005400 Sobic001G291500 Sobic001G291500 Sobic006G027500--Sobic001G291500 Sobic006G007600 Sobic006G007600 Sobic006G027500--Sobic006G007600 Sobic010G171900--Sobic004G018900 Sobic010G171900--Sobic006G027500 Sobic010G171900--Sobic005G186500 Sobic010G171900--Sobic008G080600 Sobic010G171900--Sobic006G007100 Sobic010G171900--Sobic004G019100 Sobic010G171900--Sobic006G007600 Sobic010G171900--Sobic006G005400 Sobic010G171900--Sobic001G291500 Sobic008G080400--Sobic004G182700 Sobic008G080400--Sobic008G036300 Sobic008G080400--Sobic008G067200 Sobic001G198800 Sobic001G198800 Sobic008G080400--Sobic001G198800 Sobic003G057900 Sobic003G057900 Sobic008G080400--Sobic003G057900 Sobic008G080400--Sobic008G080600 Sobic008G080400--Sobic005G167500 Sobic008G080400--Sobic003G131000 Sobic009G132900 Sobic009G132900 Sobic008G080400--Sobic009G132900 Sobic009G254600--Sobic010G038500 Sobic009G254600--Sobic008G081200 Sobic001G189100 Sobic001G189100 Sobic009G254600--Sobic001G189100 Sobic004G035700 Sobic004G035700 Sobic009G254600--Sobic004G035700 Sobic003G237600 Sobic003G237600 Sobic009G254600--Sobic003G237600 Sobic010G183100 Sobic010G183100 Sobic009G254600--Sobic010G183100 Sobic001G068400 Sobic001G068400 Sobic009G254600--Sobic001G068400 Sobic007G189700 Sobic007G189700 Sobic009G254600--Sobic007G189700 Sobic010G038500--Sobic008G081200 Sobic010G038500--Sobic009G254600 Sobic010G038500--Sobic001G068400 Sobic002G040100 Sobic002G040100 Sobic010G038500--Sobic002G040100 Sobic010G038500--Sobic004G035700 Sobic010G038500--Sobic010G183100 Sobic002G233300 Sobic002G233300 Sobic010G038500--Sobic002G233300 Sobic003G199800 Sobic003G199800 Sobic010G038500--Sobic003G199800 Sobic010G038500--Sobic003G131000 Sobic003G097800 Sobic003G097800 Sobic005G118300--Sobic003G097800 Sobic005G217900 Sobic005G217900 Sobic005G118300--Sobic005G217900 Sobic005G118300--Sobic002G233300 Sobic005G015200 Sobic005G015200 Sobic005G118300--Sobic005G015200 Sobic001G317400 Sobic001G317400 Sobic005G118300--Sobic001G317400 Sobic001G344600 Sobic001G344600 Sobic005G118300--Sobic001G344600 Sobic005G118300--Sobic010G038500 Sobic005G118300--Sobic005G167500 Sobic005G118300--Sobic008G036300
Octagon: transcription factors


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