Gene annotation
Transcriptome id Sobic.003G061200.1
Synonym Sb03g005235
Functional annotation 5-nucleotidase domain-containing protein, putative, expressed
UniProt A0A1B6Q1S4
Pfam PF05761
Panther DB PTHR12103 PTHR12103:SF15
NCBI CDD KOG2469; IMP-GMP specific 5'-nucleotidase
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G48960 : HAD-superfamily hydrolase, subfamily IG, 5\'-nucleotidase
RAP-DB (Rice) LOC_Os01g14810.1 : 5-nucleotidase domain-containing protein, putative, expressed
MaizeGDB (Corn) Zm00025a035361
Brachypodium PNT70258 , PNT70260 , PNT70261 , PNT70259 , PNT70262 , KQK03602 , KQK03603 , PNT70257
Barley HORVU3Hr1G034210.7 , HORVU3Hr1G034210.6 , HORVU3Hr1G034210.5 , HORVU3Hr1G034210.4 , HORVU3Hr1G034210.3 , HORVU3Hr1G034210.2 , HORVU3Hr1G034210.1
Wheat TraesCS3D02G176600 , TraesCS3D02G176600 , TraesCS3D02G176600 , TraesCS3D02G176600 , TraesCS3B02G200700 , TraesCS3A02G165000 , TraesCS3A02G165000
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.007G010700 OsFBL6 - F-box domain and LRR containing protein, expressed -
2 Sobic.004G070500 expressed protein -
3 Sobic.004G034600 hydrolase, alpha/beta fold family domain containing protein, expressed -
4 Sobic.001G053200 expressed protein -
5 Sobic.005G221250 - -
6 Sobic.005G149700 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@expressed protein -
7 Sobic.008G187632 - -
8 Sobic.005G089400 - -
9 Sobic.001G000501 - -
10 Sobic.002G249300 auxin efflux carrier component, putative, expressed -
11 Sobic.010G262500 glyceraldehyde-3-phosphate dehydrogenase, putative, expressed K00134: GAPDH, glyceraldehyde 3-phosphate dehydrogenase
12 Sobic.004G261900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence./late senescence marker during developmental senescence(PubMedID : 27586543)@diacylglycerol O-acyltransferase, putative, expressed K14457: MOGAT2, 2-acylglycerol O-acyltransferase 2
13 Sobic.003G331300 methyltransferase domain containing protein, expressed K15190: MEPCE, 7SK snRNA methylphosphate capping enzyme
14 Sobic.005G053200 pollen signalling protein with adenylyl cyclase activity, putative, expressed -
15 Sobic.004G253700 - -
16 Sobic.002G266000 ankyrin repeat-containing protein, putative, expressed -
17 Sobic.008G081800 expressed protein -
18 Sobic.005G150350 - -
19 Sobic.010G020800 aminotransferase, classes I and II, domain containing protein, expressed K14270: aminotransferase
20 Sobic.001G459600 expressed protein -


Gene co-expression network
sample Sobic003G061200 Sobic003G061200 Sobic007G010700 Sobic007G010700 Sobic003G061200--Sobic007G010700 Sobic004G070500 Sobic004G070500 Sobic003G061200--Sobic004G070500 Sobic004G034600 Sobic004G034600 Sobic003G061200--Sobic004G034600 Sobic001G053200 Sobic001G053200 Sobic003G061200--Sobic001G053200 Sobic005G221250 Sobic005G221250 Sobic003G061200--Sobic005G221250 Sobic005G149700 Sobic005G149700 Sobic003G061200--Sobic005G149700 Sobic008G187632 Sobic008G187632 Sobic003G061200--Sobic008G187632 Sobic005G089400 Sobic005G089400 Sobic003G061200--Sobic005G089400 Sobic001G000501 Sobic001G000501 Sobic003G061200--Sobic001G000501 Sobic007G010700--Sobic004G070500 Sobic005G053200 Sobic005G053200 Sobic007G010700--Sobic005G053200 Sobic007G010700--Sobic001G000501 Sobic004G253700 Sobic004G253700 Sobic007G010700--Sobic004G253700 Sobic007G010700--Sobic004G034600 Sobic005G133600 Sobic005G133600 Sobic007G010700--Sobic005G133600 Sobic007G010700--Sobic003G061200 Sobic002G249300 Sobic002G249300 Sobic007G010700--Sobic002G249300 Sobic007G010700--Sobic005G089400 Sobic001G375100 Sobic001G375100 Sobic004G070500--Sobic001G375100 Sobic004G070500--Sobic007G010700 Sobic003G146500 Sobic003G146500 Sobic004G070500--Sobic003G146500 Sobic004G070500--Sobic004G034600 Sobic004G325100 Sobic004G325100 Sobic004G070500--Sobic004G325100 Sobic002G124600 Sobic002G124600 Sobic004G070500--Sobic002G124600 Sobic003G247500 Sobic003G247500 Sobic004G070500--Sobic003G247500 Sobic007G193700 Sobic007G193700 Sobic004G070500--Sobic007G193700 Sobic004G070500--Sobic005G053200 Sobic004G034600--Sobic005G149700 Sobic004G034600--Sobic002G249300 Sobic001G517800 Sobic001G517800 Sobic004G034600--Sobic001G517800 Sobic009G011600 Sobic009G011600 Sobic004G034600--Sobic009G011600 Sobic002G266000 Sobic002G266000 Sobic004G034600--Sobic002G266000 Sobic001G459600 Sobic001G459600 Sobic004G034600--Sobic001G459600 Sobic003G322700 Sobic003G322700 Sobic004G034600--Sobic003G322700 Sobic001G223550 Sobic001G223550 Sobic004G034600--Sobic001G223550 Sobic004G261900 Sobic004G261900 Sobic004G034600--Sobic004G261900 Sobic001G053200--Sobic004G034600 Sobic001G053200--Sobic005G133600 Sobic001G053200--Sobic001G223550 Sobic003G174301 Sobic003G174301 Sobic001G053200--Sobic003G174301 Sobic001G053200--Sobic002G249300 Sobic002G321800 Sobic002G321800 Sobic001G053200--Sobic002G321800 Sobic001G053200--Sobic005G149700 Sobic006G175800 Sobic006G175800 Sobic001G053200--Sobic006G175800 Sobic003G160100 Sobic003G160100 Sobic001G053200--Sobic003G160100 Sobic005G221250--Sobic008G187632 Sobic005G150350 Sobic005G150350 Sobic005G221250--Sobic005G150350 Sobic010G262500 Sobic010G262500 Sobic005G221250--Sobic010G262500 Sobic001G298700 Sobic001G298700 Sobic005G221250--Sobic001G298700 Sobic009G139000 Sobic009G139000 Sobic005G221250--Sobic009G139000 Sobic005G182000 Sobic005G182000 Sobic005G221250--Sobic005G182000 Sobic009G161550 Sobic009G161550 Sobic005G221250--Sobic009G161550 Sobic005G221250--Sobic003G160100 Sobic005G221250--Sobic003G061200 Sobic005G149700--Sobic004G034600 Sobic001G504900 Sobic001G504900 Sobic005G149700--Sobic001G504900 Sobic005G149700--Sobic002G266000 Sobic002G128200 Sobic002G128200 Sobic005G149700--Sobic002G128200 Sobic006G104600 Sobic006G104600 Sobic005G149700--Sobic006G104600 Sobic005G149700--Sobic009G011600 Sobic009G207600 Sobic009G207600 Sobic005G149700--Sobic009G207600 Sobic005G149700--Sobic003G174301 Sobic003G398100 Sobic003G398100 Sobic005G149700--Sobic003G398100 Sobic008G187632--Sobic005G221250 Sobic008G187632--Sobic005G150350 Sobic008G187632--Sobic003G160100 Sobic002G187700 Sobic002G187700 Sobic008G187632--Sobic002G187700 Sobic010G020800 Sobic010G020800 Sobic008G187632--Sobic010G020800 Sobic008G187632--Sobic010G262500 Sobic008G187632--Sobic002G124600 Sobic008G187632--Sobic001G517800 Sobic008G187632--Sobic001G000501 Sobic005G089400--Sobic001G000501 Sobic005G089400--Sobic004G253700 Sobic005G089400--Sobic001G223550 Sobic008G101100 Sobic008G101100 Sobic005G089400--Sobic008G101100 Sobic003G416000 Sobic003G416000 Sobic005G089400--Sobic003G416000 Sobic005G089400--Sobic007G010700 Sobic005G089400--Sobic001G459600 Sobic010G145500 Sobic010G145500 Sobic005G089400--Sobic010G145500 Sobic008G122100 Sobic008G122100 Sobic005G089400--Sobic008G122100 Sobic001G000501--Sobic001G459600 Sobic001G000700 Sobic001G000700 Sobic001G000501--Sobic001G000700 Sobic001G000501--Sobic005G089400 Sobic001G000501--Sobic007G010700 Sobic008G084300 Sobic008G084300 Sobic001G000501--Sobic008G084300 Sobic001G000501--Sobic005G149700 Sobic001G000501--Sobic004G034600 Sobic001G000501--Sobic005G053200 Sobic001G000501--Sobic004G253700
Octagon: transcription factors


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