Gene annotation
Transcriptome id Sobic.003G331300.1
Synonym Sb03g037685
Functional annotation methyltransferase domain containing protein, expressed
UniProt C5XN48
Pfam PF13489
Panther DB PTHR12315
NCBI CDD KOG2899; Predicted methyltransferase
KEGG Orthology K15190; MEPCE, 7SK snRNA methylphosphate capping enzyme
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G51130 : S-adenosyl-L-methionine-dependent methyltransferases superfamily protein
RAP-DB (Rice) LOC_Os08g42760.1 : methyltransferase domain containing protein, expressed
MaizeGDB (Corn) Zm00025a033618
Brachypodium -
Barley HORVU0Hr1G021200.11 , HORVU0Hr1G021200.10 , HORVU0Hr1G021200.9 , HORVU0Hr1G021200.8 , HORVU0Hr1G021200.1 , HORVU0Hr1G021200.3 , HORVU0Hr1G021200.2 , HORVU0Hr1G021200.5 , HORVU0Hr1G021200.4 , HORVU0Hr1G021200.7 , HORVU0Hr1G021200.6
Wheat TraesCS7D02G267900 , TraesCS7D02G267900 , TraesCS7A02G266800 , TraesCS7A02G266900 , TraesCS7B02G165600 , TraesCS7B02G165400 , TraesCS7D02G268000
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G185400 - -
2 Sobic.010G262500 glyceraldehyde-3-phosphate dehydrogenase, putative, expressed K00134: GAPDH, glyceraldehyde 3-phosphate dehydrogenase
3 Sobic.007G010700 OsFBL6 - F-box domain and LRR containing protein, expressed -
4 Sobic.001G100900 OsDegp14 - Putative Deg protease homologue, expressed -
5 Sobic.006G225900 expressed protein -
6 Sobic.003G112800 T-complex protein, putative, expressed K09494: T-complex protein 1 subunit beta
7 Sobic.004G174200 pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16, putative, expressed K12813: pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16
8 Sobic.004G263600 - K03655: ATP-dependent DNA helicase RecG
9 Sobic.003G220800 RNA recognition motif containing protein, putative, expressed K12741: heterogeneous nuclear ribonucleoprotein A1/A3
10 Sobic.001G066500 zinc ion binding protein, putative, expressed -
11 Sobic.003G086900 C2 domain containing protein, putative, expressed -
12 Sobic.009G110000 phospholipase D p1, putative, expressed -
13 Sobic.001G268200 zinc finger, C3HC4 type domain containing protein, expressed -
14 Sobic.010G013200 CPuORF21 - conserved peptide uORF-containing transcript, expressed K08829: male germ cell-associated kinase
15 Sobic.006G160300 DNA binding protein, putative, expressed -
16 Sobic.001G519900 ribonuclease protein, putative, expressed K12585: DIS3, exosome complex exonuclease DIS3/RRP44
17 Sobic.001G016700 ion channel DMI1-like, chloroplast precursor, putative, expressed -
18 Sobic.006G055200 RNA-binding motif protein, putative, expressed K13192: RNA-binding protein 26
19 Sobic.006G175800 acyl-CoA thioesterase 2, putative, expressed K01068: acyl-coenzyme A thioesterase 1/2/4
20 Sobic.001G303100 expressed protein -


Gene co-expression network
sample Sobic003G331300 Sobic003G331300 Sobic003G185400 Sobic003G185400 Sobic003G331300--Sobic003G185400 Sobic010G262500 Sobic010G262500 Sobic003G331300--Sobic010G262500 Sobic007G010700 Sobic007G010700 Sobic003G331300--Sobic007G010700 Sobic001G100900 Sobic001G100900 Sobic003G331300--Sobic001G100900 Sobic006G225900 Sobic006G225900 Sobic003G331300--Sobic006G225900 Sobic003G112800 Sobic003G112800 Sobic003G331300--Sobic003G112800 Sobic004G174200 Sobic004G174200 Sobic003G331300--Sobic004G174200 Sobic004G263600 Sobic004G263600 Sobic003G331300--Sobic004G263600 Sobic003G220800 Sobic003G220800 Sobic003G331300--Sobic003G220800 Sobic001G066500 Sobic001G066500 Sobic003G185400--Sobic001G066500 Sobic003G185400--Sobic003G331300 Sobic003G185400--Sobic004G263600 Sobic006G043400 Sobic006G043400 Sobic003G185400--Sobic006G043400 Sobic001G016700 Sobic001G016700 Sobic003G185400--Sobic001G016700 Sobic010G102600 Sobic010G102600 Sobic003G185400--Sobic010G102600 Sobic010G003400 Sobic010G003400 Sobic003G185400--Sobic010G003400 Sobic003G185400--Sobic004G174200 Sobic008G087866 Sobic008G087866 Sobic003G185400--Sobic008G087866 Sobic006G175800 Sobic006G175800 Sobic010G262500--Sobic006G175800 Sobic001G298700 Sobic001G298700 Sobic010G262500--Sobic001G298700 Sobic005G221250 Sobic005G221250 Sobic010G262500--Sobic005G221250 Sobic010G262500--Sobic003G331300 Sobic005G150350 Sobic005G150350 Sobic010G262500--Sobic005G150350 Sobic010G013200 Sobic010G013200 Sobic010G262500--Sobic010G013200 Sobic010G262500--Sobic003G112800 Sobic008G059100 Sobic008G059100 Sobic010G262500--Sobic008G059100 Sobic001G488700 Sobic001G488700 Sobic010G262500--Sobic001G488700 Sobic004G070500 Sobic004G070500 Sobic007G010700--Sobic004G070500 Sobic005G053200 Sobic005G053200 Sobic007G010700--Sobic005G053200 Sobic001G000501 Sobic001G000501 Sobic007G010700--Sobic001G000501 Sobic004G253700 Sobic004G253700 Sobic007G010700--Sobic004G253700 Sobic004G034600 Sobic004G034600 Sobic007G010700--Sobic004G034600 Sobic005G133600 Sobic005G133600 Sobic007G010700--Sobic005G133600 Sobic003G061200 Sobic003G061200 Sobic007G010700--Sobic003G061200 Sobic002G249300 Sobic002G249300 Sobic007G010700--Sobic002G249300 Sobic005G089400 Sobic005G089400 Sobic007G010700--Sobic005G089400 Sobic001G100900--Sobic004G174200 Sobic003G155100 Sobic003G155100 Sobic001G100900--Sobic003G155100 Sobic004G291900 Sobic004G291900 Sobic001G100900--Sobic004G291900 Sobic009G201300 Sobic009G201300 Sobic001G100900--Sobic009G201300 Sobic009G074400 Sobic009G074400 Sobic001G100900--Sobic009G074400 Sobic008G001200 Sobic008G001200 Sobic001G100900--Sobic008G001200 Sobic006G219600 Sobic006G219600 Sobic001G100900--Sobic006G219600 Sobic002G211800 Sobic002G211800 Sobic001G100900--Sobic002G211800 Sobic001G100900--Sobic003G220800 Sobic003G086900 Sobic003G086900 Sobic006G225900--Sobic003G086900 Sobic006G225900--Sobic004G174200 Sobic001G375100 Sobic001G375100 Sobic006G225900--Sobic001G375100 Sobic006G225900--Sobic004G291900 Sobic009G110000 Sobic009G110000 Sobic006G225900--Sobic009G110000 Sobic001G390800 Sobic001G390800 Sobic006G225900--Sobic001G390800 Sobic001G268200 Sobic001G268200 Sobic006G225900--Sobic001G268200 Sobic006G225900--Sobic001G016700 Sobic002G411600 Sobic002G411600 Sobic006G225900--Sobic002G411600 Sobic003G112800--Sobic010G262500 Sobic003G112800--Sobic003G331300 Sobic003G043300 Sobic003G043300 Sobic003G112800--Sobic003G043300 Sobic001G262700 Sobic001G262700 Sobic003G112800--Sobic001G262700 Sobic003G112800--Sobic001G100900 Sobic003G302900 Sobic003G302900 Sobic003G112800--Sobic003G302900 Sobic003G112800--Sobic003G185400 Sobic001G128300 Sobic001G128300 Sobic003G112800--Sobic001G128300 Sobic009G066900 Sobic009G066900 Sobic003G112800--Sobic009G066900 Sobic004G174200--Sobic004G291900 Sobic004G174200--Sobic002G411600 Sobic004G174200--Sobic008G001200 Sobic010G206900 Sobic010G206900 Sobic004G174200--Sobic010G206900 Sobic002G008900 Sobic002G008900 Sobic004G174200--Sobic002G008900 Sobic001G289800 Sobic001G289800 Sobic004G174200--Sobic001G289800 Sobic005G001000 Sobic005G001000 Sobic004G174200--Sobic005G001000 Sobic003G422500 Sobic003G422500 Sobic004G174200--Sobic003G422500 Sobic001G194200 Sobic001G194200 Sobic004G174200--Sobic001G194200 Sobic007G193700 Sobic007G193700 Sobic004G263600--Sobic007G193700 Sobic004G263600--Sobic004G174200 Sobic004G263600--Sobic001G194200 Sobic006G055200 Sobic006G055200 Sobic004G263600--Sobic006G055200 Sobic004G263600--Sobic004G291900 Sobic004G263600--Sobic005G001000 Sobic004G263600--Sobic008G001200 Sobic001G072500 Sobic001G072500 Sobic004G263600--Sobic001G072500 Sobic004G023000 Sobic004G023000 Sobic004G263600--Sobic004G023000 Sobic009G084000 Sobic009G084000 Sobic003G220800--Sobic009G084000 Sobic003G220800--Sobic001G100900 Sobic003G220800--Sobic003G043300 Sobic010G074300 Sobic010G074300 Sobic003G220800--Sobic010G074300 Sobic001G241100 Sobic001G241100 Sobic003G220800--Sobic001G241100 Sobic002G359400 Sobic002G359400 Sobic003G220800--Sobic002G359400 Sobic002G047700 Sobic002G047700 Sobic003G220800--Sobic002G047700 Sobic006G092400 Sobic006G092400 Sobic003G220800--Sobic006G092400 Sobic010G147000 Sobic010G147000 Sobic003G220800--Sobic010G147000
Octagon: transcription factors


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