Gene annotation
Transcriptome id Sobic.001G066500.12,Sobic.001G066500.6,Sobic.001G066500.10,Sobic.001G066500.7,Sobic.001G066500.1,Sobic.001G066500.9,Sobic.001G066500.5,Sobic.001G066500.11,Sobic.001G066500.8
Synonym ILP1, ATILP1
Functional annotation zinc ion binding protein, putative, expressed
UniProt A0A1B6QHM7 , A0A1B6QHL5
Pfam PF07967
Panther DB PTHR15835 PTHR15835:SF6
NCBI CDD KOG4765; Uncharacterized conserved protein
KEGG Orthology -
Gene Ontology GO:0008270; zinc ion binding GO:0005634nucleus


Orthologs (automatic annotation)
TAIR AT1G17210 : IAP-like protein 1
RAP-DB (Rice) LOC_Os03g57160.1 : zinc ion binding protein, putative, expressed
MaizeGDB (Corn) Zm00025a008464
Brachypodium KQK12864 , KQK12865
Barley HORVU5Hr1G103380.14 , HORVU5Hr1G103380.15 , HORVU5Hr1G103380.16 , HORVU5Hr1G103380.17 , HORVU5Hr1G103380.10 , HORVU5Hr1G103380.11 , HORVU5Hr1G103380.12 , HORVU5Hr1G103380.13 , HORVU5Hr1G103380.6 , HORVU5Hr1G103380.7 , HORVU5Hr1G103380.4 , HORVU5Hr1G103380.5 , HORVU5Hr1G103380.2 , HORVU5Hr1G103380.3 , HORVU5Hr1G103380.1 , HORVU5Hr1G103380.8 , HORVU5Hr1G103380.9
Wheat TraesCS5A02G423700 , TraesCS5A02G423700 , TraesCS5A02G423700 , TraesCS5D02G432200 , TraesCS5D02G432200 , TraesCS5B02G426000 , TraesCS5B02G426000 , TraesCS5B02G426000
Populus -


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cDNA sequences
Sobic.001G066500


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G043400 - -
2 Sobic.003G185400 - -
3 Sobic.010G217600 PHD-finger domain containing protein, putative, expressed -
4 Sobic.004G334300 ATMAK10, putative, expressed -
5 Sobic.001G519900 ribonuclease protein, putative, expressed K12585: DIS3, exosome complex exonuclease DIS3/RRP44
6 Sobic.010G102600 pentatricopeptide, putative, expressed -
7 Sobic.004G253700 - -
8 Sobic.K025800 - -
9 Sobic.010G169600 OsCML2 - Calmodulin-related calcium sensor protein, expressed -
10 Sobic.003G331300 methyltransferase domain containing protein, expressed K15190: MEPCE, 7SK snRNA methylphosphate capping enzyme
11 Sobic.007G010700 OsFBL6 - F-box domain and LRR containing protein, expressed -
12 Sobic.003G186000 WD domain, G-beta repeat domain containing protein, expressed -
13 Sobic.001G111850 - -
14 Sobic.002G308700 expressed protein K11643: CHD4, chromodomain-helicase-DNA-binding protein 4
15 Sobic.003G032700 - -
16 Sobic.004G070500 expressed protein -
17 Sobic.003G247500 expressed protein -
18 Sobic.004G276400 expressed protein K11320: E1A-binding protein p400
19 Sobic.006G055200 RNA-binding motif protein, putative, expressed K13192: RNA-binding protein 26
20 Sobic.007G031900 OsFBX207 - F-box domain containing protein, expressed -


Gene co-expression network
sample Sobic001G066500 Sobic001G066500 Sobic006G043400 Sobic006G043400 Sobic001G066500--Sobic006G043400 Sobic003G185400 Sobic003G185400 Sobic001G066500--Sobic003G185400 Sobic010G217600 Sobic010G217600 Sobic001G066500--Sobic010G217600 Sobic004G334300 Sobic004G334300 Sobic001G066500--Sobic004G334300 Sobic001G519900 Sobic001G519900 Sobic001G066500--Sobic001G519900 Sobic010G102600 Sobic010G102600 Sobic001G066500--Sobic010G102600 Sobic004G253700 Sobic004G253700 Sobic001G066500--Sobic004G253700 SobicK025800 SobicK025800 Sobic001G066500--SobicK025800 Sobic010G169600 Sobic010G169600 Sobic001G066500--Sobic010G169600 Sobic006G043400--Sobic001G066500 Sobic006G043400--SobicK025800 Sobic006G043400--Sobic004G334300 Sobic006G043400--Sobic003G185400 Sobic006G043400--Sobic010G217600 Sobic008G088872 Sobic008G088872 Sobic006G043400--Sobic008G088872 Sobic001G111850 Sobic001G111850 Sobic006G043400--Sobic001G111850 Sobic006G043400--Sobic004G253700 Sobic007G010700 Sobic007G010700 Sobic006G043400--Sobic007G010700 Sobic003G185400--Sobic001G066500 Sobic003G331300 Sobic003G331300 Sobic003G185400--Sobic003G331300 Sobic004G263600 Sobic004G263600 Sobic003G185400--Sobic004G263600 Sobic003G185400--Sobic006G043400 Sobic001G016700 Sobic001G016700 Sobic003G185400--Sobic001G016700 Sobic003G185400--Sobic010G102600 Sobic010G003400 Sobic010G003400 Sobic003G185400--Sobic010G003400 Sobic004G174200 Sobic004G174200 Sobic003G185400--Sobic004G174200 Sobic008G087866 Sobic008G087866 Sobic003G185400--Sobic008G087866 Sobic010G019000 Sobic010G019000 Sobic010G217600--Sobic010G019000 Sobic010G217600--Sobic004G334300 Sobic001G303100 Sobic001G303100 Sobic010G217600--Sobic001G303100 Sobic001G381600 Sobic001G381600 Sobic010G217600--Sobic001G381600 Sobic010G217600--Sobic001G066500 Sobic002G305000 Sobic002G305000 Sobic010G217600--Sobic002G305000 Sobic009G255700 Sobic009G255700 Sobic010G217600--Sobic009G255700 Sobic010G227800 Sobic010G227800 Sobic010G217600--Sobic010G227800 Sobic004G244900 Sobic004G244900 Sobic010G217600--Sobic004G244900 Sobic003G186000 Sobic003G186000 Sobic004G334300--Sobic003G186000 Sobic008G001200 Sobic008G001200 Sobic004G334300--Sobic008G001200 Sobic001G457800 Sobic001G457800 Sobic004G334300--Sobic001G457800 Sobic006G040500 Sobic006G040500 Sobic004G334300--Sobic006G040500 Sobic010G123600 Sobic010G123600 Sobic004G334300--Sobic010G123600 Sobic002G308700 Sobic002G308700 Sobic004G334300--Sobic002G308700 Sobic005G162500 Sobic005G162500 Sobic004G334300--Sobic005G162500 Sobic004G334300--Sobic004G244900 Sobic004G276400 Sobic004G276400 Sobic004G334300--Sobic004G276400 Sobic001G373900 Sobic001G373900 Sobic001G519900--Sobic001G373900 Sobic001G519900--Sobic004G334300 Sobic001G519900--Sobic002G308700 Sobic001G519900--Sobic003G186000 Sobic001G519900--Sobic005G162500 Sobic004G356700 Sobic004G356700 Sobic001G519900--Sobic004G356700 Sobic001G375100 Sobic001G375100 Sobic001G519900--Sobic001G375100 Sobic001G192000 Sobic001G192000 Sobic001G519900--Sobic001G192000 Sobic006G259800 Sobic006G259800 Sobic001G519900--Sobic006G259800 Sobic008G014801 Sobic008G014801 Sobic010G102600--Sobic008G014801 Sobic001G089600 Sobic001G089600 Sobic010G102600--Sobic001G089600 Sobic004G320500 Sobic004G320500 Sobic010G102600--Sobic004G320500 Sobic001G453400 Sobic001G453400 Sobic010G102600--Sobic001G453400 Sobic001G493700 Sobic001G493700 Sobic010G102600--Sobic001G493700 Sobic005G122700 Sobic005G122700 Sobic010G102600--Sobic005G122700 Sobic010G115400 Sobic010G115400 Sobic010G102600--Sobic010G115400 Sobic010G102600--Sobic010G003400 Sobic003G166750 Sobic003G166750 Sobic010G102600--Sobic003G166750 Sobic008G101100 Sobic008G101100 Sobic004G253700--Sobic008G101100 Sobic005G089400 Sobic005G089400 Sobic004G253700--Sobic005G089400 Sobic008G122100 Sobic008G122100 Sobic004G253700--Sobic008G122100 Sobic005G133600 Sobic005G133600 Sobic004G253700--Sobic005G133600 Sobic004G253700--Sobic007G010700 Sobic001G000501 Sobic001G000501 Sobic004G253700--Sobic001G000501 Sobic009G248801 Sobic009G248801 Sobic004G253700--Sobic009G248801 Sobic003G416000 Sobic003G416000 Sobic004G253700--Sobic003G416000 Sobic008G105366 Sobic008G105366 Sobic004G253700--Sobic008G105366 SobicK025800--Sobic006G043400 SobicK025800--Sobic001G066500 Sobic006G247900 Sobic006G247900 SobicK025800--Sobic006G247900 Sobic010G055700 Sobic010G055700 SobicK025800--Sobic010G055700 SobicK025800--Sobic008G014801 Sobic003G032700 Sobic003G032700 SobicK025800--Sobic003G032700 Sobic003G171500 Sobic003G171500 SobicK025800--Sobic003G171500 SobicK025800--Sobic010G102600 SobicK025800--Sobic001G111850 Sobic010G169600--Sobic003G186000 Sobic010G169600--Sobic004G276400 Sobic008G098900 Sobic008G098900 Sobic010G169600--Sobic008G098900 Sobic001G370900 Sobic001G370900 Sobic010G169600--Sobic001G370900 Sobic010G169600--Sobic002G308700 Sobic008G085300 Sobic008G085300 Sobic010G169600--Sobic008G085300 Sobic006G184900 Sobic006G184900 Sobic010G169600--Sobic006G184900 Sobic004G223000 Sobic004G223000 Sobic010G169600--Sobic004G223000 Sobic010G169600--Sobic005G162500
Octagon: transcription factors


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