Gene annotation
Transcriptome id Sobic.003G072400.1
Synonym Sb03g006140
Functional annotation expressed protein
UniProt A0A1B6Q1T9
Pfam PF14389 PF04784
Panther DB PTHR23054 PTHR23054:SF22
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT2G39690 : Protein of unknown function, DUF547
RAP-DB (Rice) LOC_Os01g05480.3 : expressed protein
MaizeGDB (Corn) Zm00025a023472
Brachypodium PNT69933 , KQK02702 , KQK02703
Barley HORVU3Hr1G013360.16 , HORVU3Hr1G013360.17 , HORVU3Hr1G013360.14 , HORVU3Hr1G013360.15 , HORVU3Hr1G013360.12 , HORVU3Hr1G013360.13 , HORVU3Hr1G013360.10 , HORVU3Hr1G013360.11 , HORVU3Hr1G013360.18 , HORVU3Hr1G013360.2 , HORVU3Hr1G013360.4 , HORVU3Hr1G013360.5 , HORVU3Hr1G013360.6 , HORVU3Hr1G013360.7 , HORVU3Hr1G013360.1 , HORVU3Hr1G013360.3 , HORVU3Hr1G013360.8 , HORVU3Hr1G013360.9
Wheat TraesCS3A02G073200 , TraesCS3D02G072900 , TraesCS3B02G087300 , TraesCS3B02G087300
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G070600 oxidoreductase, short chain dehydrogenase/reductase family domain containing family, expressed -
2 Sobic.001G207600 white-brown complex homolog protein 11, putative, expressed -
3 Sobic.004G283800 dehydration response related protein, putative, expressed -
4 Sobic.003G045700 pleiotropic drug resistance protein, putative, expressed -
5 Sobic.005G104100 peroxidase precursor, putative, expressed K00430: peroxidase
6 Sobic.001G221900 3-ketoacyl-CoA synthase precursor, putative, expressed K15397: 3-ketoacyl-CoA synthase
7 Sobic.001G074000 receptor protein kinase CLAVATA1 precursor, putative, expressed -
8 Sobic.006G125800 oxidoreductase, short chain dehydrogenase/reductase family, putative, expressed K10251: HSD17B12, KAR, 17beta-estradiol 17-dehydrogenase / very-long-chain 3-oxoacyl-CoA reductase
9 Sobic.009G235700 transporter family protein, putative, expressed K08145: SLC2A8, MFS transporter, SP family, solute carrier family 2 (facilitated glucose transporter), member 8
10 Sobic.010G231600 cytochrome P450, putative, expressed -
11 Sobic.005G156100 Long chain acyl CoA synthetase 2 LACS2 (At)(PubMedID : 27208977)@AMP-binding enzyme, putative, expressed K01897: ACSL, long-chain acyl-CoA synthetase
12 Sobic.003G356600 ATROPGEF7/ROPGEF7, putative, expressed -
13 Sobic.004G274600 "domain confirmed by Pfam database, expression supported by NCBI EST database, expressed in leaf, flower and stem, expression induced by IAA, BR and ABA treatments"(PubMedID : 20528920)@multidrug resistance protein, putative, expressed K05658: ABCB1, ATP-binding cassette, subfamily B (MDR/TAP), member 1
14 Sobic.010G020600 Receptor-like protein kinase 5 precursor(PubMedID : 28620409)@receptor-like protein kinase 5 precursor, putative, expressed -
15 Sobic.001G298800 ternary complex factor MIP1, putative, expressed -
16 Sobic.003G339600 Homologous to EPF/EPFL genes in Arabidopsis. Modelling of protein structure.(PubMedID : 23755192)@expressed protein -
17 Sobic.002G071850 - -
18 Sobic.010G014700 expressed protein -
19 Sobic.004G344100 GDSL-like lipase/acylhydrolase, putative, expressed -
20 Sobic.006G068200 expressed protein -


Gene co-expression network
sample Sobic003G072400 Sobic003G072400 Sobic003G070600 Sobic003G070600 Sobic003G072400--Sobic003G070600 Sobic001G207600 Sobic001G207600 Sobic003G072400--Sobic001G207600 Sobic004G283800 Sobic004G283800 Sobic003G072400--Sobic004G283800 Sobic003G045700 Sobic003G045700 Sobic003G072400--Sobic003G045700 Sobic005G104100 Sobic005G104100 Sobic003G072400--Sobic005G104100 Sobic001G221900 Sobic001G221900 Sobic003G072400--Sobic001G221900 Sobic001G074000 Sobic001G074000 Sobic003G072400--Sobic001G074000 Sobic006G125800 Sobic006G125800 Sobic003G072400--Sobic006G125800 Sobic009G235700 Sobic009G235700 Sobic003G072400--Sobic009G235700 Sobic003G070600--Sobic001G074000 Sobic010G020600 Sobic010G020600 Sobic003G070600--Sobic010G020600 Sobic007G160300 Sobic007G160300 Sobic003G070600--Sobic007G160300 Sobic001G199400 Sobic001G199400 Sobic003G070600--Sobic001G199400 Sobic003G113500 Sobic003G113500 Sobic003G070600--Sobic003G113500 Sobic003G070600--Sobic001G221900 Sobic004G274600 Sobic004G274600 Sobic003G070600--Sobic004G274600 Sobic003G070600--Sobic004G283800 Sobic004G248100 Sobic004G248100 Sobic003G070600--Sobic004G248100 Sobic001G207600--Sobic003G045700 Sobic001G207600--Sobic004G283800 Sobic001G207600--Sobic004G274600 Sobic009G174100 Sobic009G174100 Sobic001G207600--Sobic009G174100 Sobic010G231600 Sobic010G231600 Sobic001G207600--Sobic010G231600 Sobic001G207600--Sobic010G020600 Sobic005G156100 Sobic005G156100 Sobic001G207600--Sobic005G156100 Sobic008G097700 Sobic008G097700 Sobic001G207600--Sobic008G097700 Sobic003G339600 Sobic003G339600 Sobic001G207600--Sobic003G339600 Sobic004G283800--Sobic001G207600 Sobic004G283800--Sobic004G274600 Sobic004G283800--Sobic003G339600 Sobic002G229700 Sobic002G229700 Sobic004G283800--Sobic002G229700 Sobic004G283800--Sobic003G070600 Sobic004G283800--Sobic010G020600 Sobic004G283800--Sobic009G235700 Sobic004G357000 Sobic004G357000 Sobic004G283800--Sobic004G357000 Sobic004G283800--Sobic003G113500 Sobic003G045700--Sobic010G231600 Sobic003G045700--Sobic001G207600 Sobic003G045700--Sobic004G283800 Sobic003G045700--Sobic005G156100 Sobic009G031400 Sobic009G031400 Sobic003G045700--Sobic009G031400 Sobic001G441700 Sobic001G441700 Sobic003G045700--Sobic001G441700 Sobic003G045700--Sobic006G125800 Sobic001G023500 Sobic001G023500 Sobic003G045700--Sobic001G023500 Sobic009G173200 Sobic009G173200 Sobic003G045700--Sobic009G173200 Sobic003G283400 Sobic003G283400 Sobic005G104100--Sobic003G283400 Sobic004G344100 Sobic004G344100 Sobic005G104100--Sobic004G344100 Sobic001G298800 Sobic001G298800 Sobic005G104100--Sobic001G298800 Sobic009G129700 Sobic009G129700 Sobic005G104100--Sobic009G129700 Sobic005G104100--Sobic001G074000 Sobic005G104100--Sobic001G221900 Sobic001G522300 Sobic001G522300 Sobic005G104100--Sobic001G522300 Sobic005G104100--Sobic003G072400 Sobic010G181500 Sobic010G181500 Sobic005G104100--Sobic010G181500 Sobic001G221900--Sobic003G070600 Sobic001G221900--Sobic009G235700 Sobic001G221900--Sobic010G020600 Sobic010G078700 Sobic010G078700 Sobic001G221900--Sobic010G078700 Sobic001G221900--Sobic003G339600 Sobic001G221900--Sobic001G199400 Sobic001G221900--Sobic004G248100 Sobic001G221900--Sobic001G074000 Sobic001G221900--Sobic003G113500 Sobic001G074000--Sobic001G522300 Sobic001G074000--Sobic003G070600 Sobic001G074000--Sobic009G129700 Sobic001G074000--Sobic007G160300 Sobic001G074000--Sobic001G199400 Sobic001G493900 Sobic001G493900 Sobic001G074000--Sobic001G493900 Sobic003G019900 Sobic003G019900 Sobic001G074000--Sobic003G019900 Sobic010G014700 Sobic010G014700 Sobic001G074000--Sobic010G014700 Sobic001G074000--Sobic010G020600 Sobic006G125800--Sobic009G235700 Sobic006G125800--Sobic003G339600 Sobic006G125800--Sobic010G020600 Sobic002G382500 Sobic002G382500 Sobic006G125800--Sobic002G382500 Sobic006G125800--Sobic001G221900 Sobic006G125800--Sobic004G283800 Sobic010G107200 Sobic010G107200 Sobic006G125800--Sobic010G107200 Sobic002G419200 Sobic002G419200 Sobic006G125800--Sobic002G419200 Sobic003G360700 Sobic003G360700 Sobic006G125800--Sobic003G360700 Sobic009G235700--Sobic006G125800 Sobic009G235700--Sobic010G020600 Sobic009G235700--Sobic001G221900 Sobic009G235700--Sobic004G248100 Sobic009G235700--Sobic003G339600 Sobic009G235700--Sobic001G522300 Sobic007G165800 Sobic007G165800 Sobic009G235700--Sobic007G165800 Sobic009G235700--Sobic004G283800 Sobic009G235700--Sobic003G360700
Octagon: transcription factors


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