Gene annotation
Transcriptome id Sobic.003G081800.1
Synonym Sb03g006860
Functional annotation expressed protein
UniProt C5XQR8
Pfam -
Panther DB PTHR34542 PTHR34542:SF2
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) LOC_Os01g04390.1 : expressed protein
MaizeGDB (Corn) Zm00025a023553 , Zm00025a035579
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G199500 expressed protein -
2 Sobic.006G236600 bHLH family protein, putative, expressed -
3 Sobic.002G194600 integral membrane protein, putative, expressed -
4 Sobic.010G134900 DNA binding protein, putative, expressed -
5 Sobic.002G239700 receptor-like protein kinase 2 precursor, putative, expressed -
6 Sobic.008G169300 remorin family protein, putative, expressed -
7 Sobic.006G124200 expressed protein -
8 Sobic.004G214300 AP2-like ethylene-responsive transcription factor PLETHORA 2, putative, expressed K09285: OVM, AP2-like factor, ANT lineage
9 Sobic.008G158900 chitinase 2, putative, expressed -
10 Sobic.009G102400 "domain confirmed by Pfam database, expressed in root, expression induced by BR treatment"(PubMedID : 20499123)@DUF260 domain containing protein, putative, expressed -
11 Sobic.010G155800 proteins of unknown function domain containing protein, expressed -
12 Sobic.002G346300 - -
13 Sobic.003G419400 xylanase inhibitor, putative, expressed -
14 Sobic.003G128800 expansin precursor, putative, expressed -
15 Sobic.003G146800 folic acid synthesis protein, putative, expressed K13941: 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase / dihydropteroate synthase
16 Sobic.008G077900 exostosin family domain containing protein, expressed -
17 Sobic.004G112200 no apical meristem protein, putative, expressed -
18 Sobic.010G234300 - -
19 Sobic.005G115600 6-phosphogluconate dehydrogenase, decarboxylating, putative, expressed K00033: PGD, gnd, 6-phosphogluconate dehydrogenase
20 Sobic.009G058400 expressed protein -


Gene co-expression network
sample Sobic003G081800 Sobic003G081800 Sobic010G199500 Sobic010G199500 Sobic003G081800--Sobic010G199500 Sobic006G236600 Sobic006G236600 Sobic003G081800--Sobic006G236600 Sobic002G194600 Sobic002G194600 Sobic003G081800--Sobic002G194600 Sobic010G134900 Sobic010G134900 Sobic003G081800--Sobic010G134900 Sobic002G239700 Sobic002G239700 Sobic003G081800--Sobic002G239700 Sobic008G169300 Sobic008G169300 Sobic003G081800--Sobic008G169300 Sobic006G124200 Sobic006G124200 Sobic003G081800--Sobic006G124200 Sobic004G214300 Sobic004G214300 Sobic003G081800--Sobic004G214300 Sobic008G158900 Sobic008G158900 Sobic003G081800--Sobic008G158900 Sobic002G250300 Sobic002G250300 Sobic010G199500--Sobic002G250300 Sobic002G343100 Sobic002G343100 Sobic010G199500--Sobic002G343100 Sobic008G077900 Sobic008G077900 Sobic010G199500--Sobic008G077900 Sobic009G208700 Sobic009G208700 Sobic010G199500--Sobic009G208700 Sobic001G506800 Sobic001G506800 Sobic010G199500--Sobic001G506800 Sobic010G199500--Sobic008G169300 Sobic009G181600 Sobic009G181600 Sobic010G199500--Sobic009G181600 Sobic010G155800 Sobic010G155800 Sobic010G199500--Sobic010G155800 Sobic009G058600 Sobic009G058600 Sobic010G199500--Sobic009G058600 Sobic006G236600--Sobic008G158900 Sobic006G236600--Sobic002G194600 Sobic009G058400 Sobic009G058400 Sobic006G236600--Sobic009G058400 Sobic006G236600--Sobic010G155800 Sobic005G219700 Sobic005G219700 Sobic006G236600--Sobic005G219700 Sobic004G296300 Sobic004G296300 Sobic006G236600--Sobic004G296300 Sobic003G082700 Sobic003G082700 Sobic006G236600--Sobic003G082700 Sobic008G055800 Sobic008G055800 Sobic006G236600--Sobic008G055800 Sobic002G076700 Sobic002G076700 Sobic006G236600--Sobic002G076700 Sobic002G194600--Sobic008G158900 Sobic002G194600--Sobic008G055800 Sobic002G194600--Sobic010G155800 Sobic005G100800 Sobic005G100800 Sobic002G194600--Sobic005G100800 Sobic007G212000 Sobic007G212000 Sobic002G194600--Sobic007G212000 Sobic005G097900 Sobic005G097900 Sobic002G194600--Sobic005G097900 Sobic001G271300 Sobic001G271300 Sobic002G194600--Sobic001G271300 Sobic010G152300 Sobic010G152300 Sobic002G194600--Sobic010G152300 Sobic004G261500 Sobic004G261500 Sobic002G194600--Sobic004G261500 Sobic001G261400 Sobic001G261400 Sobic010G134900--Sobic001G261400 Sobic010G134900--Sobic004G214300 Sobic009G102400 Sobic009G102400 Sobic010G134900--Sobic009G102400 Sobic010G134900--Sobic006G124200 Sobic003G419300 Sobic003G419300 Sobic010G134900--Sobic003G419300 Sobic010G155100 Sobic010G155100 Sobic010G134900--Sobic010G155100 Sobic010G134900--Sobic002G239700 Sobic004G112200 Sobic004G112200 Sobic010G134900--Sobic004G112200 Sobic003G419400 Sobic003G419400 Sobic010G134900--Sobic003G419400 Sobic002G239700--Sobic008G077900 Sobic005G222600 Sobic005G222600 Sobic002G239700--Sobic005G222600 Sobic006G205500 Sobic006G205500 Sobic002G239700--Sobic006G205500 Sobic001G232000 Sobic001G232000 Sobic002G239700--Sobic001G232000 Sobic005G071700 Sobic005G071700 Sobic002G239700--Sobic005G071700 Sobic002G239700--Sobic003G419300 Sobic003G001300 Sobic003G001300 Sobic002G239700--Sobic003G001300 Sobic002G239700--Sobic003G419400 Sobic009G060700 Sobic009G060700 Sobic002G239700--Sobic009G060700 Sobic008G169300--Sobic010G199500 Sobic003G324600 Sobic003G324600 Sobic008G169300--Sobic003G324600 Sobic008G169300--Sobic009G058600 Sobic008G169300--Sobic003G419300 Sobic003G019400 Sobic003G019400 Sobic008G169300--Sobic003G019400 Sobic008G169300--Sobic004G112200 Sobic008G169300--Sobic002G250300 Sobic008G169300--Sobic004G214300 Sobic008G169300--Sobic002G239700 Sobic006G124200--Sobic009G102400 Sobic006G124200--Sobic004G214300 Sobic006G124200--Sobic001G261400 Sobic005G105600 Sobic005G105600 Sobic006G124200--Sobic005G105600 Sobic006G013300 Sobic006G013300 Sobic006G124200--Sobic006G013300 Sobic006G124200--Sobic010G134900 Sobic006G124200--Sobic003G019400 Sobic010G177300 Sobic010G177300 Sobic006G124200--Sobic010G177300 Sobic003G395200 Sobic003G395200 Sobic006G124200--Sobic003G395200 Sobic004G214300--Sobic009G102400 Sobic004G214300--Sobic006G124200 Sobic004G214300--Sobic010G155100 Sobic004G214300--Sobic010G134900 Sobic004G214300--Sobic001G261400 Sobic004G214300--Sobic003G419300 Sobic004G214300--Sobic003G019400 Sobic004G214300--Sobic002G239700 Sobic004G214300--Sobic004G112200 Sobic008G158900--Sobic002G194600 Sobic008G158900--Sobic006G236600 Sobic001G538932 Sobic001G538932 Sobic008G158900--Sobic001G538932 Sobic008G158900--Sobic010G155800 Sobic008G158900--Sobic005G219700 Sobic008G158900--Sobic006G124200 Sobic008G158900--Sobic004G214300 Sobic008G158900--Sobic008G055800 Sobic002G222600 Sobic002G222600 Sobic008G158900--Sobic002G222600
Octagon: transcription factors


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