Gene annotation
Transcriptome id Sobic.006G236600.1
Synonym BS1, Sb06g030340, ATBS1, TMO7
Functional annotation bHLH family protein, putative, expressed
UniProt C5Y8Z3
Pfam PF00010
Panther DB PTHR12565 PTHR12565:SF117
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G74500 : activation-tagged BRI1(brassinosteroid-insensitive 1)-suppressor 1
RAP-DB (Rice) LOC_Os04g54900.1 : bHLH family protein, putative, expressed
MaizeGDB (Corn) -
Brachypodium -
Barley HORVU2Hr1G115240.3 , HORVU2Hr1G115240.2
Wheat TraesCS2B02G550900
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.008G158900 chitinase 2, putative, expressed -
2 Sobic.002G194600 integral membrane protein, putative, expressed -
3 Sobic.009G058400 expressed protein -
4 Sobic.010G155800 proteins of unknown function domain containing protein, expressed -
5 Sobic.005G219700 Leucine Rich Repeat family protein, expressed -
6 Sobic.004G296300 amino acid permease, putative, expressed K03294: basic amino acid/polyamine antiporter, APA family
7 Sobic.003G082700 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@glycosyl hydrolase family 10 protein, putative, expressed -
8 Sobic.008G055800 MYB family transcription factor, putative, expressed K09422: transcription factor MYB, plant
9 Sobic.002G076700 IPP transferase, putative, expressed K10760: adenylate dimethylallyltransferase (cytokinin synthase)
10 Sobic.003G239100 lipase class 3 family protein, putative, expressed -
11 Sobic.001G538932 - -
12 Sobic.002G085800 cytokinin-N-glucosyltransferase 1, putative, expressed -
13 Sobic.005G115600 6-phosphogluconate dehydrogenase, decarboxylating, putative, expressed K00033: PGD, gnd, 6-phosphogluconate dehydrogenase
14 Sobic.009G058600 "domain confirmed by Pfam database, expression supported by NCBI EST database, expressed in root"(PubMedID : 20499123)@DUF260 domain containing protein, putative, expressed -
15 Sobic.003G081800 expressed protein -
16 Sobic.001G232000 glycine-rich cell wall structural protein 2 precursor, putative, expressed -
17 Sobic.009G008800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@xylem cysteine proteinase 2 precursor, putative, expressed K16290: xylem cysteine proteinase
18 Sobic.002G383900 sphingolipid C4-hydroxylase SUR2, putative, expressed K04713: sphinganine C4-monooxygenase
19 Sobic.001G263900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence./late senescence marker during developmental senescence(PubMedID : 27586543)@dehydrogenase, putative, expressed K00001: E1.1.1.1, alcohol dehydrogenase
20 Sobic.006G124200 expressed protein -


Gene co-expression network
sample Sobic006G236600 Sobic006G236600 Sobic008G158900 Sobic008G158900 Sobic006G236600--Sobic008G158900 Sobic002G194600 Sobic002G194600 Sobic006G236600--Sobic002G194600 Sobic009G058400 Sobic009G058400 Sobic006G236600--Sobic009G058400 Sobic010G155800 Sobic010G155800 Sobic006G236600--Sobic010G155800 Sobic005G219700 Sobic005G219700 Sobic006G236600--Sobic005G219700 Sobic004G296300 Sobic004G296300 Sobic006G236600--Sobic004G296300 Sobic003G082700 Sobic003G082700 Sobic006G236600--Sobic003G082700 Sobic008G055800 Sobic008G055800 Sobic006G236600--Sobic008G055800 Sobic002G076700 Sobic002G076700 Sobic006G236600--Sobic002G076700 Sobic008G158900--Sobic002G194600 Sobic008G158900--Sobic006G236600 Sobic001G538932 Sobic001G538932 Sobic008G158900--Sobic001G538932 Sobic008G158900--Sobic010G155800 Sobic008G158900--Sobic005G219700 Sobic006G124200 Sobic006G124200 Sobic008G158900--Sobic006G124200 Sobic004G214300 Sobic004G214300 Sobic008G158900--Sobic004G214300 Sobic008G158900--Sobic008G055800 Sobic002G222600 Sobic002G222600 Sobic008G158900--Sobic002G222600 Sobic002G194600--Sobic008G158900 Sobic002G194600--Sobic008G055800 Sobic002G194600--Sobic010G155800 Sobic005G100800 Sobic005G100800 Sobic002G194600--Sobic005G100800 Sobic007G212000 Sobic007G212000 Sobic002G194600--Sobic007G212000 Sobic005G097900 Sobic005G097900 Sobic002G194600--Sobic005G097900 Sobic001G271300 Sobic001G271300 Sobic002G194600--Sobic001G271300 Sobic010G152300 Sobic010G152300 Sobic002G194600--Sobic010G152300 Sobic004G261500 Sobic004G261500 Sobic002G194600--Sobic004G261500 Sobic005G052700 Sobic005G052700 Sobic009G058400--Sobic005G052700 Sobic007G090600 Sobic007G090600 Sobic009G058400--Sobic007G090600 Sobic009G060700 Sobic009G060700 Sobic009G058400--Sobic009G060700 Sobic009G208700 Sobic009G208700 Sobic009G058400--Sobic009G208700 Sobic004G014600 Sobic004G014600 Sobic009G058400--Sobic004G014600 Sobic005G222600 Sobic005G222600 Sobic009G058400--Sobic005G222600 Sobic007G220400 Sobic007G220400 Sobic009G058400--Sobic007G220400 Sobic002G003400 Sobic002G003400 Sobic009G058400--Sobic002G003400 Sobic002G115600 Sobic002G115600 Sobic009G058400--Sobic002G115600 Sobic010G155800--Sobic009G208700 Sobic002G343100 Sobic002G343100 Sobic010G155800--Sobic002G343100 Sobic003G255600 Sobic003G255600 Sobic010G155800--Sobic003G255600 Sobic003G183300 Sobic003G183300 Sobic010G155800--Sobic003G183300 Sobic001G471800 Sobic001G471800 Sobic010G155800--Sobic001G471800 Sobic003G282300 Sobic003G282300 Sobic010G155800--Sobic003G282300 Sobic004G193500 Sobic004G193500 Sobic010G155800--Sobic004G193500 Sobic006G160900 Sobic006G160900 Sobic010G155800--Sobic006G160900 Sobic002G146000 Sobic002G146000 Sobic010G155800--Sobic002G146000 Sobic003G001300 Sobic003G001300 Sobic005G219700--Sobic003G001300 Sobic005G219700--Sobic002G003400 Sobic005G219700--Sobic009G060700 Sobic006G224500 Sobic006G224500 Sobic005G219700--Sobic006G224500 Sobic008G077900 Sobic008G077900 Sobic005G219700--Sobic008G077900 Sobic004G322000 Sobic004G322000 Sobic005G219700--Sobic004G322000 Sobic001G506600 Sobic001G506600 Sobic005G219700--Sobic001G506600 Sobic007G020700 Sobic007G020700 Sobic005G219700--Sobic007G020700 Sobic002G029600 Sobic002G029600 Sobic005G219700--Sobic002G029600 Sobic009G251100 Sobic009G251100 Sobic004G296300--Sobic009G251100 Sobic007G130900 Sobic007G130900 Sobic004G296300--Sobic007G130900 Sobic001G196000 Sobic001G196000 Sobic004G296300--Sobic001G196000 Sobic007G139500 Sobic007G139500 Sobic004G296300--Sobic007G139500 Sobic010G096100 Sobic010G096100 Sobic004G296300--Sobic010G096100 Sobic003G017500 Sobic003G017500 Sobic004G296300--Sobic003G017500 Sobic008G174900 Sobic008G174900 Sobic004G296300--Sobic008G174900 Sobic010G120300 Sobic010G120300 Sobic004G296300--Sobic010G120300 Sobic007G079600 Sobic007G079600 Sobic004G296300--Sobic007G079600 Sobic003G352700 Sobic003G352700 Sobic003G082700--Sobic003G352700 Sobic003G239100 Sobic003G239100 Sobic003G082700--Sobic003G239100 Sobic009G008800 Sobic009G008800 Sobic003G082700--Sobic009G008800 Sobic004G047600 Sobic004G047600 Sobic003G082700--Sobic004G047600 Sobic001G484000 Sobic001G484000 Sobic003G082700--Sobic001G484000 Sobic003G082700--Sobic006G160900 Sobic003G426200 Sobic003G426200 Sobic003G082700--Sobic003G426200 Sobic003G082700--Sobic001G471800 Sobic001G068500 Sobic001G068500 Sobic003G082700--Sobic001G068500 Sobic003G371400 Sobic003G371400 Sobic008G055800--Sobic003G371400 Sobic008G055800--Sobic003G082700 Sobic008G055800--Sobic003G352700 Sobic003G099166 Sobic003G099166 Sobic008G055800--Sobic003G099166 Sobic007G119500 Sobic007G119500 Sobic008G055800--Sobic007G119500 Sobic003G378800 Sobic003G378800 Sobic008G055800--Sobic003G378800 Sobic008G055800--Sobic004G047600 Sobic008G055800--Sobic003G255600 Sobic005G127200 Sobic005G127200 Sobic008G055800--Sobic005G127200 Sobic002G076700--Sobic010G152300 Sobic002G076700--Sobic009G060700 Sobic002G076700--Sobic005G222600 Sobic002G076700--Sobic009G058400 Sobic006G092100 Sobic006G092100 Sobic002G076700--Sobic006G092100 Sobic001G232000 Sobic001G232000 Sobic002G076700--Sobic001G232000 Sobic002G076700--Sobic003G001300 Sobic005G134200 Sobic005G134200 Sobic002G076700--Sobic005G134200 Sobic001G521600 Sobic001G521600 Sobic002G076700--Sobic001G521600
Octagon: transcription factors


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