Gene annotation
Transcriptome id Sobic.003G146800.4,Sobic.003G146800.2,Sobic.003G146800.5,Sobic.003G146800.3
Synonym Sb03g012700
Functional annotation folic acid synthesis protein, putative, expressed
UniProt C5XIR7
Pfam PF01288 PF00809
Panther DB PTHR20941 PTHR20941:SF1
NCBI CDD -
KEGG Orthology K13941; 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase / dihydropteroate synthase
Gene Ontology GO:0009396; folic acid-containing compound biosynthetic process GO:00038482-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase activity


Orthologs (automatic annotation)
TAIR AT4G30000 : Dihydropterin pyrophosphokinase / Dihydropteroate synthase
RAP-DB (Rice) LOC_Os07g42632.1,LOC_Os07g42632.2 : folic acid synthesis protein, putative, expressed
MaizeGDB (Corn) Zm00025a047834
Brachypodium KQK15156
Barley HORVU2Hr1G030680.3 , HORVU2Hr1G030680.5 , HORVU2Hr1G030680.4 , HORVU2Hr1G030680.7 , HORVU2Hr1G030680.6 , HORVU2Hr1G030680.9 , HORVU2Hr1G030680.8 , HORVU2Hr1G030680.15 , HORVU2Hr1G030680.14 , HORVU2Hr1G030680.17 , HORVU2Hr1G030680.16 , HORVU2Hr1G030680.11 , HORVU2Hr1G030680.10 , HORVU2Hr1G030680.13 , HORVU2Hr1G030680.12 , HORVU2Hr1G030680.19 , HORVU2Hr1G030680.18 , HORVU2Hr1G030680.20 , HORVU2Hr1G030680.21
Wheat TraesCS2B02G192900 , TraesCS2A02G166800 , TraesCS2A02G166800
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G228200 T-complex protein, putative, expressed K04077: groEL, chaperonin GroEL
2 Sobic.002G186900 enolase, putative, expressed K01689: ENO, enolase
3 Sobic.007G139500 phosphofructokinase, putative, expressed K00850: pfkA, 6-phosphofructokinase 1
4 Sobic.002G271300 NC domain-containing protein, putative, expressed -
5 Sobic.001G397000 argininosuccinate lyase, putative, expressed K01755: argH, argininosuccinate lyase
6 Sobic.009G059500 solute carrier family 35 member E3, putative, expressed K15285: solute carrier family 35, member E3
7 Sobic.001G432300 imidazole glycerol phosphate synthase hisHF, chloroplast precursor, putative, expressed K01663: imidazole glycerol-phosphate synthase
8 Sobic.010G032700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@methyltransferase domain containing protein, expressed K11434: type I protein arginine methyltransferase
9 Sobic.001G392200 CAS1 domain-containing protein 1 precursor, putative, expressed -
10 Sobic.007G152900 POLE2A - Putative DNA polymerase epsilon complex subunit, expressed K02325: DNA polymerase epsilon subunit 2
11 Sobic.006G029400 GDSL-like lipase/acylhydrolase, putative, expressed -
12 Sobic.009G113900 expressed protein -
13 Sobic.010G067800 integral membrane transporter family protein, putative, expressed -
14 Sobic.010G103700 POLA2 - Putative DNA polymerase alpha complex subunit, expressed K02321: DNA polymerase alpha subunit B
15 Sobic.010G054100 SHR5-receptor-like kinase, putative, expressed -
16 Sobic.002G218600 Disease resistance/zinc finger/chromosome condensation-like region protein, putative, expressed -
17 Sobic.007G079600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@FabA-like domain containing protein, expressed K02372: 3-hydroxyacyl-[acyl-carrier-protein] dehydratase
18 Sobic.002G275900 Ser/Thr protein phosphatase family protein, putative, expressed -
19 Sobic.004G261300 NAD dependent epimerase/dehydratase family protein, putative, expressed -
20 Sobic.003G008600 eukaryotic translation initiation factor 3 subunit E-interacting protein, putative, expressed K15029: translation initiation factor 3 subunit L


Gene co-expression network
sample Sobic003G146800 Sobic003G146800 Sobic001G228200 Sobic001G228200 Sobic003G146800--Sobic001G228200 Sobic002G186900 Sobic002G186900 Sobic003G146800--Sobic002G186900 Sobic007G139500 Sobic007G139500 Sobic003G146800--Sobic007G139500 Sobic002G271300 Sobic002G271300 Sobic003G146800--Sobic002G271300 Sobic001G397000 Sobic001G397000 Sobic003G146800--Sobic001G397000 Sobic009G059500 Sobic009G059500 Sobic003G146800--Sobic009G059500 Sobic001G432300 Sobic001G432300 Sobic003G146800--Sobic001G432300 Sobic010G032700 Sobic010G032700 Sobic003G146800--Sobic010G032700 Sobic001G392200 Sobic001G392200 Sobic003G146800--Sobic001G392200 Sobic008G168100 Sobic008G168100 Sobic001G228200--Sobic008G168100 Sobic001G228200--Sobic009G059500 Sobic001G228200--Sobic002G186900 Sobic001G371100 Sobic001G371100 Sobic001G228200--Sobic001G371100 Sobic001G228200--Sobic003G146800 Sobic001G228200--Sobic001G397000 Sobic007G113300 Sobic007G113300 Sobic001G228200--Sobic007G113300 Sobic002G280700 Sobic002G280700 Sobic001G228200--Sobic002G280700 Sobic004G326600 Sobic004G326600 Sobic001G228200--Sobic004G326600 Sobic002G186900--Sobic009G059500 Sobic002G186900--Sobic002G271300 Sobic003G096000 Sobic003G096000 Sobic002G186900--Sobic003G096000 Sobic010G089500 Sobic010G089500 Sobic002G186900--Sobic010G089500 Sobic010G101600 Sobic010G101600 Sobic002G186900--Sobic010G101600 Sobic004G056400 Sobic004G056400 Sobic002G186900--Sobic004G056400 Sobic002G186900--Sobic001G228200 Sobic006G200000 Sobic006G200000 Sobic002G186900--Sobic006G200000 Sobic007G044400 Sobic007G044400 Sobic002G186900--Sobic007G044400 Sobic001G196000 Sobic001G196000 Sobic007G139500--Sobic001G196000 Sobic001G051300 Sobic001G051300 Sobic007G139500--Sobic001G051300 Sobic009G206500 Sobic009G206500 Sobic007G139500--Sobic009G206500 Sobic001G437500 Sobic001G437500 Sobic007G139500--Sobic001G437500 Sobic003G179500 Sobic003G179500 Sobic007G139500--Sobic003G179500 Sobic001G103000 Sobic001G103000 Sobic007G139500--Sobic001G103000 Sobic003G017500 Sobic003G017500 Sobic007G139500--Sobic003G017500 Sobic002G191000 Sobic002G191000 Sobic007G139500--Sobic002G191000 Sobic009G214100 Sobic009G214100 Sobic007G139500--Sobic009G214100 Sobic002G271300--Sobic009G059500 Sobic002G271300--Sobic002G186900 Sobic005G022500 Sobic005G022500 Sobic002G271300--Sobic005G022500 Sobic010G131400 Sobic010G131400 Sobic002G271300--Sobic010G131400 Sobic002G271300--Sobic008G168100 Sobic002G254900 Sobic002G254900 Sobic002G271300--Sobic002G254900 Sobic003G087700 Sobic003G087700 Sobic002G271300--Sobic003G087700 Sobic008G062900 Sobic008G062900 Sobic002G271300--Sobic008G062900 Sobic010G114000 Sobic010G114000 Sobic002G271300--Sobic010G114000 Sobic001G397000--Sobic001G371100 Sobic003G300900 Sobic003G300900 Sobic001G397000--Sobic003G300900 Sobic003G396600 Sobic003G396600 Sobic001G397000--Sobic003G396600 Sobic007G134800 Sobic007G134800 Sobic001G397000--Sobic007G134800 Sobic010G144900 Sobic010G144900 Sobic001G397000--Sobic010G144900 Sobic008G100700 Sobic008G100700 Sobic001G397000--Sobic008G100700 Sobic001G081900 Sobic001G081900 Sobic001G397000--Sobic001G081900 Sobic002G101000 Sobic002G101000 Sobic001G397000--Sobic002G101000 Sobic001G397000--Sobic001G228200 Sobic009G059500--Sobic008G168100 Sobic009G059500--Sobic002G271300 Sobic009G059500--Sobic002G186900 Sobic008G126600 Sobic008G126600 Sobic009G059500--Sobic008G126600 Sobic003G294100 Sobic003G294100 Sobic009G059500--Sobic003G294100 Sobic008G141200 Sobic008G141200 Sobic009G059500--Sobic008G141200 Sobic009G059500--Sobic001G228200 Sobic004G054000 Sobic004G054000 Sobic009G059500--Sobic004G054000 Sobic009G059500--Sobic007G044400 Sobic008G083400 Sobic008G083400 Sobic001G432300--Sobic008G083400 Sobic003G130600 Sobic003G130600 Sobic001G432300--Sobic003G130600 Sobic004G249300 Sobic004G249300 Sobic001G432300--Sobic004G249300 Sobic001G242800 Sobic001G242800 Sobic001G432300--Sobic001G242800 Sobic008G156300 Sobic008G156300 Sobic001G432300--Sobic008G156300 Sobic001G432300--Sobic004G326600 Sobic002G392800 Sobic002G392800 Sobic001G432300--Sobic002G392800 Sobic001G432300--Sobic001G228200 Sobic008G191500 Sobic008G191500 Sobic001G432300--Sobic008G191500 Sobic010G032700--Sobic001G371100 Sobic009G119700 Sobic009G119700 Sobic010G032700--Sobic009G119700 Sobic010G032700--Sobic002G280700 Sobic009G088200 Sobic009G088200 Sobic010G032700--Sobic009G088200 Sobic004G343600 Sobic004G343600 Sobic010G032700--Sobic004G343600 Sobic002G054000 Sobic002G054000 Sobic010G032700--Sobic002G054000 Sobic002G319200 Sobic002G319200 Sobic010G032700--Sobic002G319200 Sobic002G045100 Sobic002G045100 Sobic010G032700--Sobic002G045100 Sobic010G032700--Sobic001G228200 Sobic002G070300 Sobic002G070300 Sobic001G392200--Sobic002G070300 Sobic009G041800 Sobic009G041800 Sobic001G392200--Sobic009G041800 Sobic002G232400 Sobic002G232400 Sobic001G392200--Sobic002G232400 Sobic001G011000 Sobic001G011000 Sobic001G392200--Sobic001G011000 Sobic002G153000 Sobic002G153000 Sobic001G392200--Sobic002G153000 Sobic001G392200--Sobic010G101600 Sobic002G101300 Sobic002G101300 Sobic001G392200--Sobic002G101300 Sobic004G218600 Sobic004G218600 Sobic001G392200--Sobic004G218600 Sobic001G392200--Sobic002G186900
Octagon: transcription factors


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