Gene annotation
Transcriptome id Sobic.002G275900.1
Synonym ATPAP29, PAP29, Sb02g030940
Functional annotation Ser/Thr protein phosphatase family protein, putative, expressed
UniProt C5X684
Pfam PF00149
Panther DB PTHR32440 PTHR32440:SF0
NCBI CDD KOG1432; Predicted DNA repair exonuclease SIA1
KEGG Orthology -
Gene Ontology GO:0016787; hydrolase activity


Orthologs (automatic annotation)
TAIR AT5G63140 : purple acid phosphatase 29
RAP-DB (Rice) LOC_Os09g36290.1 : Ser/Thr protein phosphatase family protein, putative, expressed
MaizeGDB (Corn) Zm00025a047799
Brachypodium KQJ91187 , KQJ91186
Barley HORVU5Hr1G081840.12 , HORVU5Hr1G081840.13 , HORVU5Hr1G081840.10 , HORVU5Hr1G081840.11 , HORVU5Hr1G081840.14 , HORVU5Hr1G081840.8 , HORVU5Hr1G081840.9 , HORVU5Hr1G081840.1 , HORVU5Hr1G081840.2 , HORVU5Hr1G081840.3 , HORVU5Hr1G081840.4 , HORVU5Hr1G081840.5 , HORVU5Hr1G081840.6 , HORVU5Hr1G081840.7 , HORVU5Hr1G081950.2 , HORVU5Hr1G081950.1
Wheat TraesCS5D02G328000 , TraesCS5D02G328000 , TraesCS5D02G328000 , TraesCS5A02G321000 , TraesCS5B02G321500 , TraesCS5B02G321600 , TraesCS7A02G442200 , TraesCS5A02G321200 , TraesCS5A02G321200 , TraesCS5D02G327900 , TraesCS5D02G327800 , TraesCS5A02G321100
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G432300 imidazole glycerol phosphate synthase hisHF, chloroplast precursor, putative, expressed K01663: imidazole glycerol-phosphate synthase
2 Sobic.001G112700 class I glutamine amidotransferase, putative, expressed K01658: anthranilate synthase component II
3 Sobic.001G228200 T-complex protein, putative, expressed K04077: groEL, chaperonin GroEL
4 Sobic.002G261700 expressed protein K14001: SIL1, nucleotide exchange factor SIL1
5 Sobic.002G186900 enolase, putative, expressed K01689: ENO, enolase
6 Sobic.005G137900 zinc knuckle domain containing protein, expressed -
7 Sobic.008G150300 Lg106, putative, expressed -
8 Sobic.009G151700 protein of unknown function DUF502 domain containing protein, expressed -
9 Sobic.007G044400 MSP domain containing protein, expressed -
10 Sobic.003G169900 bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase,chloroplast precursor, putative, expressed K13832: aroDE, 3-dehydroquinate dehydratase / shikimate dehydrogenase
11 Sobic.001G145500 trafficking protein particle complex subunit 1, putative, expressed -
12 Sobic.010G134100 mitochondrial glycoprotein, putative, expressed K15414: complement component 1 Q subcomponent-binding protein, mitochondrial
13 Sobic.009G059500 solute carrier family 35 member E3, putative, expressed K15285: solute carrier family 35, member E3
14 Sobic.001G242800 oxidoreductase, aldo/keto reductase family protein, putative, expressed -
15 Sobic.005G110442 - K00432: gpx, btuE, glutathione peroxidase
16 Sobic.010G144900 fiber protein Fb34, putative, expressed -
17 Sobic.001G281900 miro, putative, expressed K07977: Arf/Sar family, other
18 Sobic.003G146800 folic acid synthesis protein, putative, expressed K13941: 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase / dihydropteroate synthase
19 Sobic.010G218300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@DNA binding protein, putative, expressed -
20 Sobic.004G282700 synthase, putative, expressed K12451: 3,5-epimerase/4-reductase


Gene co-expression network
sample Sobic002G275900 Sobic002G275900 Sobic001G432300 Sobic001G432300 Sobic002G275900--Sobic001G432300 Sobic001G112700 Sobic001G112700 Sobic002G275900--Sobic001G112700 Sobic001G228200 Sobic001G228200 Sobic002G275900--Sobic001G228200 Sobic002G261700 Sobic002G261700 Sobic002G275900--Sobic002G261700 Sobic002G186900 Sobic002G186900 Sobic002G275900--Sobic002G186900 Sobic005G137900 Sobic005G137900 Sobic002G275900--Sobic005G137900 Sobic008G150300 Sobic008G150300 Sobic002G275900--Sobic008G150300 Sobic009G151700 Sobic009G151700 Sobic002G275900--Sobic009G151700 Sobic007G044400 Sobic007G044400 Sobic002G275900--Sobic007G044400 Sobic008G083400 Sobic008G083400 Sobic001G432300--Sobic008G083400 Sobic003G130600 Sobic003G130600 Sobic001G432300--Sobic003G130600 Sobic004G249300 Sobic004G249300 Sobic001G432300--Sobic004G249300 Sobic001G242800 Sobic001G242800 Sobic001G432300--Sobic001G242800 Sobic008G156300 Sobic008G156300 Sobic001G432300--Sobic008G156300 Sobic004G326600 Sobic004G326600 Sobic001G432300--Sobic004G326600 Sobic002G392800 Sobic002G392800 Sobic001G432300--Sobic002G392800 Sobic001G432300--Sobic001G228200 Sobic008G191500 Sobic008G191500 Sobic001G432300--Sobic008G191500 Sobic001G112700--Sobic002G392800 Sobic001G112700--Sobic001G242800 Sobic002G353000 Sobic002G353000 Sobic001G112700--Sobic002G353000 Sobic006G002700 Sobic006G002700 Sobic001G112700--Sobic006G002700 Sobic001G096100 Sobic001G096100 Sobic001G112700--Sobic001G096100 Sobic002G309400 Sobic002G309400 Sobic001G112700--Sobic002G309400 Sobic003G290000 Sobic003G290000 Sobic001G112700--Sobic003G290000 Sobic009G126500 Sobic009G126500 Sobic001G112700--Sobic009G126500 Sobic010G060600 Sobic010G060600 Sobic001G112700--Sobic010G060600 Sobic008G168100 Sobic008G168100 Sobic001G228200--Sobic008G168100 Sobic009G059500 Sobic009G059500 Sobic001G228200--Sobic009G059500 Sobic001G228200--Sobic002G186900 Sobic001G371100 Sobic001G371100 Sobic001G228200--Sobic001G371100 Sobic003G146800 Sobic003G146800 Sobic001G228200--Sobic003G146800 Sobic001G397000 Sobic001G397000 Sobic001G228200--Sobic001G397000 Sobic007G113300 Sobic007G113300 Sobic001G228200--Sobic007G113300 Sobic002G280700 Sobic002G280700 Sobic001G228200--Sobic002G280700 Sobic001G228200--Sobic004G326600 Sobic004G282700 Sobic004G282700 Sobic002G261700--Sobic004G282700 Sobic002G180300 Sobic002G180300 Sobic002G261700--Sobic002G180300 Sobic009G016500 Sobic009G016500 Sobic002G261700--Sobic009G016500 Sobic001G347901 Sobic001G347901 Sobic002G261700--Sobic001G347901 Sobic003G322300 Sobic003G322300 Sobic002G261700--Sobic003G322300 Sobic002G261700--Sobic007G044400 Sobic003G333800 Sobic003G333800 Sobic002G261700--Sobic003G333800 Sobic002G101000 Sobic002G101000 Sobic002G261700--Sobic002G101000 Sobic003G170300 Sobic003G170300 Sobic002G261700--Sobic003G170300 Sobic002G186900--Sobic009G059500 Sobic002G271300 Sobic002G271300 Sobic002G186900--Sobic002G271300 Sobic003G096000 Sobic003G096000 Sobic002G186900--Sobic003G096000 Sobic010G089500 Sobic010G089500 Sobic002G186900--Sobic010G089500 Sobic010G101600 Sobic010G101600 Sobic002G186900--Sobic010G101600 Sobic004G056400 Sobic004G056400 Sobic002G186900--Sobic004G056400 Sobic002G186900--Sobic001G228200 Sobic006G200000 Sobic006G200000 Sobic002G186900--Sobic006G200000 Sobic002G186900--Sobic007G044400 Sobic010G265900 Sobic010G265900 Sobic005G137900--Sobic010G265900 Sobic005G137900--Sobic009G059500 Sobic007G092100 Sobic007G092100 Sobic005G137900--Sobic007G092100 Sobic001G402600 Sobic001G402600 Sobic005G137900--Sobic001G402600 Sobic003G052900 Sobic003G052900 Sobic005G137900--Sobic003G052900 Sobic010G144900 Sobic010G144900 Sobic005G137900--Sobic010G144900 Sobic005G137900--Sobic007G044400 Sobic010G218300 Sobic010G218300 Sobic005G137900--Sobic010G218300 Sobic001G460400 Sobic001G460400 Sobic005G137900--Sobic001G460400 Sobic008G150300--Sobic003G170300 Sobic001G281900 Sobic001G281900 Sobic008G150300--Sobic001G281900 Sobic001G338400 Sobic001G338400 Sobic008G150300--Sobic001G338400 Sobic001G458800 Sobic001G458800 Sobic008G150300--Sobic001G458800 Sobic007G161200 Sobic007G161200 Sobic008G150300--Sobic007G161200 Sobic002G410700 Sobic002G410700 Sobic008G150300--Sobic002G410700 Sobic005G105500 Sobic005G105500 Sobic008G150300--Sobic005G105500 Sobic007G159700 Sobic007G159700 Sobic008G150300--Sobic007G159700 Sobic006G211800 Sobic006G211800 Sobic008G150300--Sobic006G211800 Sobic006G267500 Sobic006G267500 Sobic009G151700--Sobic006G267500 Sobic009G206500 Sobic009G206500 Sobic009G151700--Sobic009G206500 Sobic003G345200 Sobic003G345200 Sobic009G151700--Sobic003G345200 Sobic007G139500 Sobic007G139500 Sobic009G151700--Sobic007G139500 Sobic009G246700 Sobic009G246700 Sobic009G151700--Sobic009G246700 Sobic007G040301 Sobic007G040301 Sobic009G151700--Sobic007G040301 Sobic009G061000 Sobic009G061000 Sobic009G151700--Sobic009G061000 Sobic002G161700 Sobic002G161700 Sobic009G151700--Sobic002G161700 Sobic009G119700 Sobic009G119700 Sobic009G151700--Sobic009G119700 Sobic001G196100 Sobic001G196100 Sobic007G044400--Sobic001G196100 Sobic009G189200 Sobic009G189200 Sobic007G044400--Sobic009G189200 Sobic001G116000 Sobic001G116000 Sobic007G044400--Sobic001G116000 Sobic001G026600 Sobic001G026600 Sobic007G044400--Sobic001G026600 Sobic002G313600 Sobic002G313600 Sobic007G044400--Sobic002G313600 Sobic006G102900 Sobic006G102900 Sobic007G044400--Sobic006G102900 Sobic007G044400--Sobic009G059500 Sobic007G044400--Sobic002G186900 Sobic007G183800 Sobic007G183800 Sobic007G044400--Sobic007G183800
Octagon: transcription factors


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