Gene annotation
Transcriptome id Sobic.005G110442.1,Sobic.005G110442.2,Sobic.005G110442.3
Synonym -
Functional annotation -
UniProt A0A1Z5RIU5 , C6JRI9 , A0A125QUK1
Pfam PF00255 PF00578
Panther DB PTHR11592 PTHR11592:SF33
NCBI CDD KOG1651; Glutathione peroxidase
KEGG Orthology K00432; gpx, btuE, glutathione peroxidase
Gene Ontology GO:0016491; oxidoreductase activity GO:0016209antioxidant activity GO:0006979response to oxidative stress GO:0004602glutathione peroxidase activity GO:0006979response to oxidative stress GO:0004602glutathione peroxidase activity


Orthologs (automatic annotation)
TAIR AT2G31570 : glutathione peroxidase 2
RAP-DB (Rice) LOC_Os11g18170.1 : glutathione peroxidase, putative, expressed
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


JBrowse

Open New Page


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G104100 oxidoreductase, short chain dehydrogenase/reductase family domain containing protein, expressed -
2 Sobic.009G151700 protein of unknown function DUF502 domain containing protein, expressed -
3 Sobic.003G386200 zinc finger, C3HC4 type domain containing protein, expressed -
4 Sobic.006G038200 receptor protein kinase, putative, expressed -
5 Sobic.010G144900 fiber protein Fb34, putative, expressed -
6 Sobic.008G174900 IQ calmodulin-binding motif domain containing protein, expressed -
7 Sobic.001G112700 class I glutamine amidotransferase, putative, expressed K01658: anthranilate synthase component II
8 Sobic.007G191800 expressed protein -
9 Sobic.002G333800 CSLF8 - cellulose synthase-like family F@ beta1,3@1,4 glucan synthase, expressed K00770: 1,4-beta-D-xylan synthase
10 Sobic.003G151300 serine/threonine-protein kinase, putative, expressed -
11 Sobic.010G217100 ubiquitin-conjugating enzyme, putative, expressed K10583: UBE2S, ubiquitin-conjugating enzyme E2 S
12 Sobic.006G267500 katanin p80 WD40 repeat-containing subunit B1 homolog 1, putative, expressed K18643: katanin p80 WD40 repeat-containing subunit B1
13 Sobic.010G138500 lectin protein kinase family protein, putative, expressed -
14 Sobic.002G275900 Ser/Thr protein phosphatase family protein, putative, expressed -
15 Sobic.004G051300 galactosyltransferase, putative, expressed -
16 Sobic.001G242800 oxidoreductase, aldo/keto reductase family protein, putative, expressed -
17 Sobic.009G115100 oxidoreductase, short chain dehydrogenase/reductase family domain containing protein, expressed -
18 Sobic.009G226900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@auxin-responsive protein, putative, expressed -
19 Sobic.005G204700 polygalacturonase, putative, expressed -
20 Sobic.006G191700 expansin precursor, putative, expressed -


Gene co-expression network
sample Sobic005G110442 Sobic005G110442 Sobic006G104100 Sobic006G104100 Sobic005G110442--Sobic006G104100 Sobic009G151700 Sobic009G151700 Sobic005G110442--Sobic009G151700 Sobic003G386200 Sobic003G386200 Sobic005G110442--Sobic003G386200 Sobic006G038200 Sobic006G038200 Sobic005G110442--Sobic006G038200 Sobic010G144900 Sobic010G144900 Sobic005G110442--Sobic010G144900 Sobic008G174900 Sobic008G174900 Sobic005G110442--Sobic008G174900 Sobic001G112700 Sobic001G112700 Sobic005G110442--Sobic001G112700 Sobic007G191800 Sobic007G191800 Sobic005G110442--Sobic007G191800 Sobic002G333800 Sobic002G333800 Sobic005G110442--Sobic002G333800 Sobic006G104100--Sobic010G144900 Sobic006G104100--Sobic007G191800 Sobic006G104100--Sobic005G110442 Sobic010G217100 Sobic010G217100 Sobic006G104100--Sobic010G217100 Sobic001G116000 Sobic001G116000 Sobic006G104100--Sobic001G116000 Sobic006G104100--Sobic006G038200 Sobic009G189200 Sobic009G189200 Sobic006G104100--Sobic009G189200 Sobic001G196100 Sobic001G196100 Sobic006G104100--Sobic001G196100 Sobic006G191700 Sobic006G191700 Sobic006G104100--Sobic006G191700 Sobic006G267500 Sobic006G267500 Sobic009G151700--Sobic006G267500 Sobic009G206500 Sobic009G206500 Sobic009G151700--Sobic009G206500 Sobic003G345200 Sobic003G345200 Sobic009G151700--Sobic003G345200 Sobic007G139500 Sobic007G139500 Sobic009G151700--Sobic007G139500 Sobic009G246700 Sobic009G246700 Sobic009G151700--Sobic009G246700 Sobic007G040301 Sobic007G040301 Sobic009G151700--Sobic007G040301 Sobic009G061000 Sobic009G061000 Sobic009G151700--Sobic009G061000 Sobic002G161700 Sobic002G161700 Sobic009G151700--Sobic002G161700 Sobic009G119700 Sobic009G119700 Sobic009G151700--Sobic009G119700 Sobic006G036400 Sobic006G036400 Sobic003G386200--Sobic006G036400 Sobic009G226900 Sobic009G226900 Sobic003G386200--Sobic009G226900 Sobic003G296400 Sobic003G296400 Sobic003G386200--Sobic003G296400 Sobic003G062000 Sobic003G062000 Sobic003G386200--Sobic003G062000 Sobic003G427900 Sobic003G427900 Sobic003G386200--Sobic003G427900 Sobic009G162500 Sobic009G162500 Sobic003G386200--Sobic009G162500 Sobic002G205500 Sobic002G205500 Sobic003G386200--Sobic002G205500 Sobic001G224300 Sobic001G224300 Sobic003G386200--Sobic001G224300 Sobic001G534532 Sobic001G534532 Sobic003G386200--Sobic001G534532 Sobic003G170300 Sobic003G170300 Sobic006G038200--Sobic003G170300 Sobic004G282700 Sobic004G282700 Sobic006G038200--Sobic004G282700 Sobic002G338400 Sobic002G338400 Sobic006G038200--Sobic002G338400 Sobic010G264300 Sobic010G264300 Sobic006G038200--Sobic010G264300 Sobic008G178800 Sobic008G178800 Sobic006G038200--Sobic008G178800 Sobic009G017500 Sobic009G017500 Sobic006G038200--Sobic009G017500 Sobic003G216500 Sobic003G216500 Sobic006G038200--Sobic003G216500 Sobic001G035600 Sobic001G035600 Sobic006G038200--Sobic001G035600 Sobic006G075000 Sobic006G075000 Sobic006G038200--Sobic006G075000 Sobic010G144900--Sobic009G189200 Sobic010G144900--Sobic006G104100 Sobic001G397000 Sobic001G397000 Sobic010G144900--Sobic001G397000 Sobic006G120700 Sobic006G120700 Sobic010G144900--Sobic006G120700 Sobic009G059500 Sobic009G059500 Sobic010G144900--Sobic009G059500 Sobic002G186900 Sobic002G186900 Sobic010G144900--Sobic002G186900 Sobic007G044400 Sobic007G044400 Sobic010G144900--Sobic007G044400 Sobic002G236700 Sobic002G236700 Sobic010G144900--Sobic002G236700 Sobic001G371100 Sobic001G371100 Sobic010G144900--Sobic001G371100 Sobic002G276600 Sobic002G276600 Sobic008G174900--Sobic002G276600 Sobic001G437500 Sobic001G437500 Sobic008G174900--Sobic001G437500 Sobic004G243800 Sobic004G243800 Sobic008G174900--Sobic004G243800 Sobic008G174900--Sobic006G267500 Sobic010G090500 Sobic010G090500 Sobic008G174900--Sobic010G090500 Sobic009G026101 Sobic009G026101 Sobic008G174900--Sobic009G026101 Sobic008G174900--Sobic009G226900 Sobic010G096100 Sobic010G096100 Sobic008G174900--Sobic010G096100 Sobic008G174900--Sobic009G206500 Sobic002G392800 Sobic002G392800 Sobic001G112700--Sobic002G392800 Sobic001G242800 Sobic001G242800 Sobic001G112700--Sobic001G242800 Sobic002G353000 Sobic002G353000 Sobic001G112700--Sobic002G353000 Sobic006G002700 Sobic006G002700 Sobic001G112700--Sobic006G002700 Sobic001G096100 Sobic001G096100 Sobic001G112700--Sobic001G096100 Sobic002G309400 Sobic002G309400 Sobic001G112700--Sobic002G309400 Sobic003G290000 Sobic003G290000 Sobic001G112700--Sobic003G290000 Sobic009G126500 Sobic009G126500 Sobic001G112700--Sobic009G126500 Sobic010G060600 Sobic010G060600 Sobic001G112700--Sobic010G060600 Sobic007G191800--Sobic006G104100 Sobic007G092100 Sobic007G092100 Sobic007G191800--Sobic007G092100 Sobic001G035400 Sobic001G035400 Sobic007G191800--Sobic001G035400 Sobic007G191800--Sobic001G096100 Sobic008G084100 Sobic008G084100 Sobic007G191800--Sobic008G084100 Sobic008G132400 Sobic008G132400 Sobic007G191800--Sobic008G132400 Sobic007G191800--Sobic001G196100 Sobic001G281900 Sobic001G281900 Sobic007G191800--Sobic001G281900 Sobic001G057300 Sobic001G057300 Sobic007G191800--Sobic001G057300 Sobic001G107100 Sobic001G107100 Sobic002G333800--Sobic001G107100 Sobic001G038300 Sobic001G038300 Sobic002G333800--Sobic001G038300 Sobic001G409100 Sobic001G409100 Sobic002G333800--Sobic001G409100 Sobic002G333800--Sobic006G191700 Sobic002G128800 Sobic002G128800 Sobic002G333800--Sobic002G128800 Sobic002G251100 Sobic002G251100 Sobic002G333800--Sobic002G251100 Sobic002G396400 Sobic002G396400 Sobic002G333800--Sobic002G396400 Sobic006G278100 Sobic006G278100 Sobic002G333800--Sobic006G278100 Sobic003G340100 Sobic003G340100 Sobic002G333800--Sobic003G340100
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.