Gene annotation
Transcriptome id Sobic.009G115100.1
Synonym NYC1, Sb09g018245
Functional annotation oxidoreductase, short chain dehydrogenase/reductase family domain containing protein, expressed
UniProt A0A1Z5R2W4
Pfam -
Panther DB PTHR24314
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT4G13250 : NAD(P)-binding Rossmann-fold superfamily protein
RAP-DB (Rice) LOC_Os01g12710.1 : oxidoreductase, short chain dehydrogenase/reductase family domain containing protein, expressed
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G252000 CHIT13 - Chitinase family protein precursor, expressed -
2 Sobic.001G347901 - -
3 Sobic.006G278100 expressed protein -
4 Sobic.009G102100 DUF538 domain containing protein, putative, expressed -
5 Sobic.003G400800 peptidyl-prolyl cis-trans isomerase, FKBP-type, putative, expressed K09569: FK506-binding protein 2
6 Sobic.009G114400 expressed protein K14839: nucleolar protein 16
7 Sobic.007G150800 expressed protein -
8 Sobic.009G232200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@fasciclin domain containing protein, expressed -
9 Sobic.001G107100 "SRS5(Ortholog in rice:Segami, 2012)"(PubMedID : 31659833)@tubulin/FtsZ domain containing protein, putative, expressed K07374: tubulin alpha
10 Sobic.001G510800 ribosomal protein, putative, expressed K02894: RP-L23e, large subunit ribosomal protein L23e
11 Sobic.010G005300 ribosomal protein L6, putative, expressed K02940: RP-L9e, large subunit ribosomal protein L9e
12 Sobic.002G128800 fiber protein Fb34, putative, expressed -
13 Sobic.001G304400 expressed protein -
14 Sobic.009G212200 expressed protein -
15 Sobic.002G338400 uncharacterized secreted protein, putative, expressed -
16 Sobic.004G342400 ribosomal protein, putative, expressed K02894: RP-L23e, large subunit ribosomal protein L23e
17 Sobic.002G179300 60S ribosomal protein L35a-3, putative, expressed K02917: RP-L35Ae, large subunit ribosomal protein L35Ae
18 Sobic.006G052400 LSM domain containing protein, expressed K12625: U6 snRNA-associated Sm-like protein LSm6
19 Sobic.002G255100 60S ribosomal protein L32, putative, expressed K02912: RP-L32e, large subunit ribosomal protein L32e
20 Sobic.001G096100 DNA-binding protein-related, putative, expressed K07466: RFA1, RPA1, replication factor A1


Gene co-expression network
sample Sobic009G115100 Sobic009G115100 Sobic002G252000 Sobic002G252000 Sobic009G115100--Sobic002G252000 Sobic001G347901 Sobic001G347901 Sobic009G115100--Sobic001G347901 Sobic006G278100 Sobic006G278100 Sobic009G115100--Sobic006G278100 Sobic009G102100 Sobic009G102100 Sobic009G115100--Sobic009G102100 Sobic003G400800 Sobic003G400800 Sobic009G115100--Sobic003G400800 Sobic009G114400 Sobic009G114400 Sobic009G115100--Sobic009G114400 Sobic007G150800 Sobic007G150800 Sobic009G115100--Sobic007G150800 Sobic009G232200 Sobic009G232200 Sobic009G115100--Sobic009G232200 Sobic001G107100 Sobic001G107100 Sobic009G115100--Sobic001G107100 Sobic002G128800 Sobic002G128800 Sobic002G252000--Sobic002G128800 Sobic002G338400 Sobic002G338400 Sobic002G252000--Sobic002G338400 Sobic001G418100 Sobic001G418100 Sobic002G252000--Sobic001G418100 Sobic002G396400 Sobic002G396400 Sobic002G252000--Sobic002G396400 Sobic006G156000 Sobic006G156000 Sobic002G252000--Sobic006G156000 Sobic001G038300 Sobic001G038300 Sobic002G252000--Sobic001G038300 Sobic002G252000--Sobic001G107100 Sobic003G443300 Sobic003G443300 Sobic002G252000--Sobic003G443300 Sobic003G219800 Sobic003G219800 Sobic002G252000--Sobic003G219800 Sobic004G342400 Sobic004G342400 Sobic001G347901--Sobic004G342400 Sobic002G308300 Sobic002G308300 Sobic001G347901--Sobic002G308300 Sobic009G016500 Sobic009G016500 Sobic001G347901--Sobic009G016500 Sobic009G179100 Sobic009G179100 Sobic001G347901--Sobic009G179100 Sobic001G370700 Sobic001G370700 Sobic001G347901--Sobic001G370700 Sobic009G233400 Sobic009G233400 Sobic001G347901--Sobic009G233400 Sobic002G415500 Sobic002G415500 Sobic001G347901--Sobic002G415500 Sobic009G173500 Sobic009G173500 Sobic001G347901--Sobic009G173500 Sobic001G334300 Sobic001G334300 Sobic001G347901--Sobic001G334300 Sobic006G278100--Sobic007G150800 Sobic006G278100--Sobic001G107100 Sobic006G278100--Sobic002G128800 Sobic003G250700 Sobic003G250700 Sobic006G278100--Sobic003G250700 Sobic006G278100--Sobic009G232200 Sobic006G278100--Sobic002G338400 Sobic003G122200 Sobic003G122200 Sobic006G278100--Sobic003G122200 Sobic006G191700 Sobic006G191700 Sobic006G278100--Sobic006G191700 Sobic001G261549 Sobic001G261549 Sobic006G278100--Sobic001G261549 Sobic005G047000 Sobic005G047000 Sobic009G102100--Sobic005G047000 Sobic009G188300 Sobic009G188300 Sobic009G102100--Sobic009G188300 Sobic006G013900 Sobic006G013900 Sobic009G102100--Sobic006G013900 Sobic009G102100--Sobic009G115100 Sobic004G137900 Sobic004G137900 Sobic009G102100--Sobic004G137900 Sobic002G317600 Sobic002G317600 Sobic009G102100--Sobic002G317600 Sobic004G010700 Sobic004G010700 Sobic009G102100--Sobic004G010700 Sobic004G015300 Sobic004G015300 Sobic009G102100--Sobic004G015300 Sobic009G258600 Sobic009G258600 Sobic009G102100--Sobic009G258600 Sobic001G096100 Sobic001G096100 Sobic003G400800--Sobic001G096100 Sobic009G130400 Sobic009G130400 Sobic003G400800--Sobic009G130400 Sobic008G135000 Sobic008G135000 Sobic003G400800--Sobic008G135000 Sobic003G400800--Sobic009G016500 Sobic001G168600 Sobic001G168600 Sobic003G400800--Sobic001G168600 Sobic002G331300 Sobic002G331300 Sobic003G400800--Sobic002G331300 Sobic009G212300 Sobic009G212300 Sobic003G400800--Sobic009G212300 Sobic002G255100 Sobic002G255100 Sobic003G400800--Sobic002G255100 Sobic007G092100 Sobic007G092100 Sobic003G400800--Sobic007G092100 Sobic001G225700 Sobic001G225700 Sobic009G114400--Sobic001G225700 Sobic002G049300 Sobic002G049300 Sobic009G114400--Sobic002G049300 Sobic001G085400 Sobic001G085400 Sobic009G114400--Sobic001G085400 Sobic007G178600 Sobic007G178600 Sobic009G114400--Sobic007G178600 Sobic009G227400 Sobic009G227400 Sobic009G114400--Sobic009G227400 Sobic009G144300 Sobic009G144300 Sobic009G114400--Sobic009G144300 Sobic003G249700 Sobic003G249700 Sobic009G114400--Sobic003G249700 Sobic006G221200 Sobic006G221200 Sobic009G114400--Sobic006G221200 Sobic006G081100 Sobic006G081100 Sobic009G114400--Sobic006G081100 Sobic001G475500 Sobic001G475500 Sobic007G150800--Sobic001G475500 Sobic007G150800--Sobic002G128800 Sobic010G070500 Sobic010G070500 Sobic007G150800--Sobic010G070500 Sobic007G150800--Sobic006G278100 Sobic009G212200 Sobic009G212200 Sobic007G150800--Sobic009G212200 Sobic001G444800 Sobic001G444800 Sobic007G150800--Sobic001G444800 Sobic007G150800--Sobic003G122200 Sobic007G150800--Sobic009G173500 Sobic003G011100 Sobic003G011100 Sobic007G150800--Sobic003G011100 Sobic001G334900 Sobic001G334900 Sobic009G232200--Sobic001G334900 Sobic002G347300 Sobic002G347300 Sobic009G232200--Sobic002G347300 Sobic009G232200--Sobic002G338400 Sobic009G232200--Sobic006G278100 Sobic006G075000 Sobic006G075000 Sobic009G232200--Sobic006G075000 Sobic004G168700 Sobic004G168700 Sobic009G232200--Sobic004G168700 Sobic002G072200 Sobic002G072200 Sobic009G232200--Sobic002G072200 Sobic009G032600 Sobic009G032600 Sobic009G232200--Sobic009G032600 Sobic009G232200--Sobic002G252000 Sobic001G107100--Sobic001G038300 Sobic001G107100--Sobic003G250700 Sobic001G107100--Sobic002G396400 Sobic001G107200 Sobic001G107200 Sobic001G107100--Sobic001G107200 Sobic002G333800 Sobic002G333800 Sobic001G107100--Sobic002G333800 Sobic001G107100--Sobic002G252000 Sobic001G107100--Sobic006G278100 Sobic001G156500 Sobic001G156500 Sobic001G107100--Sobic001G156500 Sobic007G090436 Sobic007G090436 Sobic001G107100--Sobic007G090436
Octagon: transcription factors


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