Gene annotation
Transcriptome id Sobic.005G137900.1
Synonym
Functional annotation zinc knuckle domain containing protein, expressed
UniProt A0A1B6PSB2
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) LOC_Os11g32720.1 : zinc knuckle domain containing protein, expressed
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G265900 novel plant SNARE 11, putative, expressed K08494: novel plant SNARE
2 Sobic.009G059500 solute carrier family 35 member E3, putative, expressed K15285: solute carrier family 35, member E3
3 Sobic.007G092100 ADP-ribosylation factor, putative, expressed K07942: ADP-ribosylation factor-like protein 1
4 Sobic.001G402600 expressed protein -
5 Sobic.003G052900 "domain confirmed by Pfam database, expression supported by NCBI EST database, expression induced by BR treatment"(PubMedID : 20499123)@-(PubMedID : 23108465)@LOB family(PubMedID : 16399802)@DUF260 domain containing protein, putative, expressed -
6 Sobic.010G144900 fiber protein Fb34, putative, expressed -
7 Sobic.007G044400 MSP domain containing protein, expressed -
8 Sobic.010G218300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@DNA binding protein, putative, expressed -
9 Sobic.001G460400 expressed protein -
10 Sobic.001G157800 26S protease regulatory subunit 6B, putative, expressed K03063: PSMC4, 26S proteasome regulatory subunit T3
11 Sobic.002G271300 NC domain-containing protein, putative, expressed -
12 Sobic.006G120700 N-acetylglucosaminyl-phosphatidylinositol de-N-acetylase, putative, expressed K03434: N-acetylglucosaminylphosphatidylinositol deacetylase
13 Sobic.004G242100 expressed protein -
14 Sobic.003G330500 peptidase, T1 family, putative, expressed -
15 Sobic.001G245800 expressed protein -
16 Sobic.010G151200 GRF zinc finger family protein, expressed -
17 Sobic.001G057300 ribosomal protein L4, putative, expressed K02930: RP-L4e, large subunit ribosomal protein L4e
18 Sobic.002G275900 Ser/Thr protein phosphatase family protein, putative, expressed -
19 Sobic.001G227850 - -
20 Sobic.003G368700 COV1, putative, expressed -


Gene co-expression network
sample Sobic005G137900 Sobic005G137900 Sobic010G265900 Sobic010G265900 Sobic005G137900--Sobic010G265900 Sobic009G059500 Sobic009G059500 Sobic005G137900--Sobic009G059500 Sobic007G092100 Sobic007G092100 Sobic005G137900--Sobic007G092100 Sobic001G402600 Sobic001G402600 Sobic005G137900--Sobic001G402600 Sobic003G052900 Sobic003G052900 Sobic005G137900--Sobic003G052900 Sobic010G144900 Sobic010G144900 Sobic005G137900--Sobic010G144900 Sobic007G044400 Sobic007G044400 Sobic005G137900--Sobic007G044400 Sobic010G218300 Sobic010G218300 Sobic005G137900--Sobic010G218300 Sobic001G460400 Sobic001G460400 Sobic005G137900--Sobic001G460400 Sobic006G200000 Sobic006G200000 Sobic010G265900--Sobic006G200000 Sobic005G120500 Sobic005G120500 Sobic010G265900--Sobic005G120500 Sobic006G102900 Sobic006G102900 Sobic010G265900--Sobic006G102900 Sobic005G080900 Sobic005G080900 Sobic010G265900--Sobic005G080900 Sobic003G084300 Sobic003G084300 Sobic010G265900--Sobic003G084300 Sobic009G189200 Sobic009G189200 Sobic010G265900--Sobic009G189200 Sobic006G120700 Sobic006G120700 Sobic010G265900--Sobic006G120700 Sobic001G157800 Sobic001G157800 Sobic010G265900--Sobic001G157800 Sobic004G344500 Sobic004G344500 Sobic010G265900--Sobic004G344500 Sobic008G168100 Sobic008G168100 Sobic009G059500--Sobic008G168100 Sobic002G271300 Sobic002G271300 Sobic009G059500--Sobic002G271300 Sobic002G186900 Sobic002G186900 Sobic009G059500--Sobic002G186900 Sobic008G126600 Sobic008G126600 Sobic009G059500--Sobic008G126600 Sobic003G294100 Sobic003G294100 Sobic009G059500--Sobic003G294100 Sobic008G141200 Sobic008G141200 Sobic009G059500--Sobic008G141200 Sobic001G228200 Sobic001G228200 Sobic009G059500--Sobic001G228200 Sobic004G054000 Sobic004G054000 Sobic009G059500--Sobic004G054000 Sobic009G059500--Sobic007G044400 Sobic004G066800 Sobic004G066800 Sobic007G092100--Sobic004G066800 Sobic001G057300 Sobic001G057300 Sobic007G092100--Sobic001G057300 Sobic001G505500 Sobic001G505500 Sobic007G092100--Sobic001G505500 Sobic001G035400 Sobic001G035400 Sobic007G092100--Sobic001G035400 Sobic001G342200 Sobic001G342200 Sobic007G092100--Sobic001G342200 Sobic003G330500 Sobic003G330500 Sobic007G092100--Sobic003G330500 Sobic001G096100 Sobic001G096100 Sobic007G092100--Sobic001G096100 Sobic004G138800 Sobic004G138800 Sobic007G092100--Sobic004G138800 Sobic009G191200 Sobic009G191200 Sobic007G092100--Sobic009G191200 Sobic004G242100 Sobic004G242100 Sobic001G402600--Sobic004G242100 Sobic007G192100 Sobic007G192100 Sobic001G402600--Sobic007G192100 Sobic001G126200 Sobic001G126200 Sobic001G402600--Sobic001G126200 Sobic001G402600--Sobic007G092100 Sobic003G358300 Sobic003G358300 Sobic001G402600--Sobic003G358300 Sobic006G143500 Sobic006G143500 Sobic001G402600--Sobic006G143500 Sobic001G285300 Sobic001G285300 Sobic001G402600--Sobic001G285300 Sobic003G224300 Sobic003G224300 Sobic001G402600--Sobic003G224300 Sobic007G073600 Sobic007G073600 Sobic001G402600--Sobic007G073600 Sobic004G030300 Sobic004G030300 Sobic003G052900--Sobic004G030300 Sobic001G245800 Sobic001G245800 Sobic003G052900--Sobic001G245800 Sobic001G455100 Sobic001G455100 Sobic003G052900--Sobic001G455100 Sobic008G135300 Sobic008G135300 Sobic003G052900--Sobic008G135300 Sobic002G226500 Sobic002G226500 Sobic003G052900--Sobic002G226500 Sobic008G099100 Sobic008G099100 Sobic003G052900--Sobic008G099100 Sobic001G295800 Sobic001G295800 Sobic003G052900--Sobic001G295800 Sobic005G231300 Sobic005G231300 Sobic003G052900--Sobic005G231300 Sobic003G247600 Sobic003G247600 Sobic003G052900--Sobic003G247600 Sobic010G144900--Sobic009G189200 Sobic006G104100 Sobic006G104100 Sobic010G144900--Sobic006G104100 Sobic001G397000 Sobic001G397000 Sobic010G144900--Sobic001G397000 Sobic010G144900--Sobic006G120700 Sobic010G144900--Sobic009G059500 Sobic010G144900--Sobic002G186900 Sobic010G144900--Sobic007G044400 Sobic002G236700 Sobic002G236700 Sobic010G144900--Sobic002G236700 Sobic001G371100 Sobic001G371100 Sobic010G144900--Sobic001G371100 Sobic001G196100 Sobic001G196100 Sobic007G044400--Sobic001G196100 Sobic007G044400--Sobic009G189200 Sobic001G116000 Sobic001G116000 Sobic007G044400--Sobic001G116000 Sobic001G026600 Sobic001G026600 Sobic007G044400--Sobic001G026600 Sobic002G313600 Sobic002G313600 Sobic007G044400--Sobic002G313600 Sobic007G044400--Sobic006G102900 Sobic007G044400--Sobic009G059500 Sobic007G044400--Sobic002G186900 Sobic007G183800 Sobic007G183800 Sobic007G044400--Sobic007G183800 Sobic010G218300--Sobic001G460400 Sobic002G283900 Sobic002G283900 Sobic010G218300--Sobic002G283900 Sobic004G161900 Sobic004G161900 Sobic010G218300--Sobic004G161900 Sobic010G045400 Sobic010G045400 Sobic010G218300--Sobic010G045400 Sobic006G160900 Sobic006G160900 Sobic010G218300--Sobic006G160900 Sobic009G238900 Sobic009G238900 Sobic010G218300--Sobic009G238900 Sobic008G191400 Sobic008G191400 Sobic010G218300--Sobic008G191400 Sobic009G221500 Sobic009G221500 Sobic010G218300--Sobic009G221500 Sobic010G218300--Sobic001G245800 Sobic001G360700 Sobic001G360700 Sobic001G460400--Sobic001G360700 Sobic001G067800 Sobic001G067800 Sobic001G460400--Sobic001G067800 Sobic001G460400--Sobic004G161900 Sobic003G017601 Sobic003G017601 Sobic001G460400--Sobic003G017601 Sobic002G207200 Sobic002G207200 Sobic001G460400--Sobic002G207200 Sobic001G227850 Sobic001G227850 Sobic001G460400--Sobic001G227850 Sobic009G246700 Sobic009G246700 Sobic001G460400--Sobic009G246700 Sobic008G037900 Sobic008G037900 Sobic001G460400--Sobic008G037900 Sobic001G460400--Sobic010G218300
Octagon: transcription factors


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