Gene annotation
Transcriptome id Sobic.004G261300.1
Synonym Sb04g029950
Functional annotation NAD dependent epimerase/dehydratase family protein, putative, expressed
UniProt C5XZW6
Pfam PF16363 PF14934
Panther DB PTHR10366 PTHR10366:SF355
NCBI CDD KOG1430; C-3 sterol dehydrogenase/3-beta-hydroxysteroid dehydrogenase and related dehydrogenases
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT2G33630 : NAD(P)-binding Rossmann-fold superfamily protein
RAP-DB (Rice) LOC_Os02g48460.1 : NAD dependent epimerase/dehydratase family protein, putative, expressed
MaizeGDB (Corn) Zm00025a021808
Brachypodium KQK01015 , KQK01014 , PNT69311 , PNT69308 , PNT69309 , PNT69310
Barley HORVU2Hr1G057100.2 , HORVU6Hr1G070300.1 , HORVU6Hr1G070300.2 , HORVU6Hr1G070300.3 , HORVU6Hr1G070300.4
Wheat TraesCS6B02G308400 , TraesCS6D02G260000 , TraesCS6A02G279600
Populus -


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cDNA sequences
Sobic.004G261300


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.009G073400 galactosyltransferase family protein, putative, expressed -
2 Sobic.003G017500 TTL1, putative, expressed -
3 Sobic.001G228200 T-complex protein, putative, expressed K04077: groEL, chaperonin GroEL
4 Sobic.002G186900 enolase, putative, expressed K01689: ENO, enolase
5 Sobic.001G168600 serpin domain containing protein, putative, expressed K13963: serpin B
6 Sobic.002G271300 NC domain-containing protein, putative, expressed -
7 Sobic.002G194800 expressed protein -
8 Sobic.006G172200 glycosyl transferase 8 domain containing protein, putative, expressed -
9 Sobic.007G139500 phosphofructokinase, putative, expressed K00850: pfkA, 6-phosphofructokinase 1
10 Sobic.010G054100 SHR5-receptor-like kinase, putative, expressed -
11 Sobic.001G432300 imidazole glycerol phosphate synthase hisHF, chloroplast precursor, putative, expressed K01663: imidazole glycerol-phosphate synthase
12 Sobic.008G178800 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase, putative, expressed K00549: 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase
13 Sobic.007G044400 MSP domain containing protein, expressed -
14 Sobic.009G059500 solute carrier family 35 member E3, putative, expressed K15285: solute carrier family 35, member E3
15 Sobic.001G313301 - -
16 Sobic.001G159800 KIP1, putative, expressed -
17 Sobic.010G090500 expressed protein -
18 Sobic.003G445000 pectinacetylesterase domain containing protein, expressed -
19 Sobic.008G191500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@N-acetylglucosaminyltransferase, putative, expressed -
20 Sobic.007G113300 BRASSINOSTEROID INSENSITIVE 1 precursor, putative, expressed -


Gene co-expression network
sample Sobic004G261300 Sobic004G261300 Sobic009G073400 Sobic009G073400 Sobic004G261300--Sobic009G073400 Sobic003G017500 Sobic003G017500 Sobic004G261300--Sobic003G017500 Sobic001G228200 Sobic001G228200 Sobic004G261300--Sobic001G228200 Sobic002G186900 Sobic002G186900 Sobic004G261300--Sobic002G186900 Sobic001G168600 Sobic001G168600 Sobic004G261300--Sobic001G168600 Sobic002G271300 Sobic002G271300 Sobic004G261300--Sobic002G271300 Sobic002G194800 Sobic002G194800 Sobic004G261300--Sobic002G194800 Sobic006G172200 Sobic006G172200 Sobic004G261300--Sobic006G172200 Sobic007G139500 Sobic007G139500 Sobic004G261300--Sobic007G139500 Sobic009G061000 Sobic009G061000 Sobic009G073400--Sobic009G061000 Sobic003G345200 Sobic003G345200 Sobic009G073400--Sobic003G345200 Sobic009G073400--Sobic003G017500 Sobic006G173200 Sobic006G173200 Sobic009G073400--Sobic006G173200 Sobic001G159800 Sobic001G159800 Sobic009G073400--Sobic001G159800 Sobic009G073400--Sobic006G172200 Sobic004G146300 Sobic004G146300 Sobic009G073400--Sobic004G146300 Sobic009G206500 Sobic009G206500 Sobic009G073400--Sobic009G206500 Sobic010G090500 Sobic010G090500 Sobic009G073400--Sobic010G090500 Sobic002G383100 Sobic002G383100 Sobic003G017500--Sobic002G383100 Sobic001G051300 Sobic001G051300 Sobic003G017500--Sobic001G051300 Sobic007G130900 Sobic007G130900 Sobic003G017500--Sobic007G130900 Sobic001G437500 Sobic001G437500 Sobic003G017500--Sobic001G437500 Sobic003G017500--Sobic007G139500 Sobic003G017500--Sobic009G073400 Sobic003G017500--Sobic009G206500 Sobic003G017500--Sobic001G159800 Sobic003G410600 Sobic003G410600 Sobic003G017500--Sobic003G410600 Sobic008G168100 Sobic008G168100 Sobic001G228200--Sobic008G168100 Sobic009G059500 Sobic009G059500 Sobic001G228200--Sobic009G059500 Sobic001G228200--Sobic002G186900 Sobic001G371100 Sobic001G371100 Sobic001G228200--Sobic001G371100 Sobic003G146800 Sobic003G146800 Sobic001G228200--Sobic003G146800 Sobic001G397000 Sobic001G397000 Sobic001G228200--Sobic001G397000 Sobic007G113300 Sobic007G113300 Sobic001G228200--Sobic007G113300 Sobic002G280700 Sobic002G280700 Sobic001G228200--Sobic002G280700 Sobic004G326600 Sobic004G326600 Sobic001G228200--Sobic004G326600 Sobic002G186900--Sobic009G059500 Sobic002G186900--Sobic002G271300 Sobic003G096000 Sobic003G096000 Sobic002G186900--Sobic003G096000 Sobic010G089500 Sobic010G089500 Sobic002G186900--Sobic010G089500 Sobic010G101600 Sobic010G101600 Sobic002G186900--Sobic010G101600 Sobic004G056400 Sobic004G056400 Sobic002G186900--Sobic004G056400 Sobic002G186900--Sobic001G228200 Sobic006G200000 Sobic006G200000 Sobic002G186900--Sobic006G200000 Sobic007G044400 Sobic007G044400 Sobic002G186900--Sobic007G044400 Sobic003G400800 Sobic003G400800 Sobic001G168600--Sobic003G400800 Sobic004G282700 Sobic004G282700 Sobic001G168600--Sobic004G282700 Sobic007G076300 Sobic007G076300 Sobic001G168600--Sobic007G076300 Sobic002G252000 Sobic002G252000 Sobic001G168600--Sobic002G252000 Sobic006G008400 Sobic006G008400 Sobic001G168600--Sobic006G008400 Sobic003G410500 Sobic003G410500 Sobic001G168600--Sobic003G410500 Sobic009G236100 Sobic009G236100 Sobic001G168600--Sobic009G236100 Sobic001G096100 Sobic001G096100 Sobic001G168600--Sobic001G096100 Sobic003G130600 Sobic003G130600 Sobic001G168600--Sobic003G130600 Sobic002G271300--Sobic009G059500 Sobic002G271300--Sobic002G186900 Sobic005G022500 Sobic005G022500 Sobic002G271300--Sobic005G022500 Sobic010G131400 Sobic010G131400 Sobic002G271300--Sobic010G131400 Sobic002G271300--Sobic008G168100 Sobic002G254900 Sobic002G254900 Sobic002G271300--Sobic002G254900 Sobic003G087700 Sobic003G087700 Sobic002G271300--Sobic003G087700 Sobic008G062900 Sobic008G062900 Sobic002G271300--Sobic008G062900 Sobic010G114000 Sobic010G114000 Sobic002G271300--Sobic010G114000 Sobic007G120800 Sobic007G120800 Sobic002G194800--Sobic007G120800 Sobic001G010700 Sobic001G010700 Sobic002G194800--Sobic001G010700 Sobic003G428200 Sobic003G428200 Sobic002G194800--Sobic003G428200 Sobic009G105900 Sobic009G105900 Sobic002G194800--Sobic009G105900 Sobic002G029300 Sobic002G029300 Sobic002G194800--Sobic002G029300 Sobic007G065500 Sobic007G065500 Sobic002G194800--Sobic007G065500 Sobic009G139800 Sobic009G139800 Sobic002G194800--Sobic009G139800 Sobic001G432300 Sobic001G432300 Sobic002G194800--Sobic001G432300 Sobic003G092700 Sobic003G092700 Sobic002G194800--Sobic003G092700 Sobic006G172200--Sobic009G073400 Sobic010G054100 Sobic010G054100 Sobic006G172200--Sobic010G054100 Sobic006G144700 Sobic006G144700 Sobic006G172200--Sobic006G144700 Sobic006G172200--Sobic003G345200 Sobic010G067800 Sobic010G067800 Sobic006G172200--Sobic010G067800 Sobic004G119700 Sobic004G119700 Sobic006G172200--Sobic004G119700 Sobic002G214200 Sobic002G214200 Sobic006G172200--Sobic002G214200 Sobic002G351700 Sobic002G351700 Sobic006G172200--Sobic002G351700 Sobic001G507000 Sobic001G507000 Sobic006G172200--Sobic001G507000 Sobic001G196000 Sobic001G196000 Sobic007G139500--Sobic001G196000 Sobic007G139500--Sobic001G051300 Sobic007G139500--Sobic009G206500 Sobic007G139500--Sobic001G437500 Sobic003G179500 Sobic003G179500 Sobic007G139500--Sobic003G179500 Sobic001G103000 Sobic001G103000 Sobic007G139500--Sobic001G103000 Sobic007G139500--Sobic003G017500 Sobic002G191000 Sobic002G191000 Sobic007G139500--Sobic002G191000 Sobic009G214100 Sobic009G214100 Sobic007G139500--Sobic009G214100
Octagon: transcription factors


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