Gene annotation
Transcriptome id Sobic.003G088900.1
Synonym LPR1, Sb03g007480
Functional annotation multicopper oxidase domain containing protein, expressed
UniProt A0A1B6Q248
Pfam PF00394 PF07731
Panther DB PTHR11709 PTHR11709:SF89
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0016491; oxidoreductase activity GO:0005507copper ion binding


Orthologs (automatic annotation)
TAIR AT1G23010 : Cupredoxin superfamily protein
RAP-DB (Rice) LOC_Os01g03530.2 : multicopper oxidase domain containing protein, expressed
MaizeGDB (Corn) Zm00025a023660
Brachypodium -
Barley HORVU3Hr1G004360.7 , HORVU3Hr1G004360.8 , HORVU3Hr1G004360.1 , HORVU3Hr1G004360.4 , HORVU3Hr1G004360.5 , HORVU3Hr1G004360.6 , HORVU3Hr1G004360.2 , HORVU3Hr1G004360.3
Wheat TraesCS4A02G276100 , TraesCS4D02G035000 , TraesCS4B02G037600 , TraesCS3A02G047500 , TraesCS3D02G032400 , TraesCS3B02G035200 , TraesCS3D02G032400
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G139900 CSLA1 - cellulose synthase-like family A@ mannan synthase, expressed K13680: beta-mannan synthase
2 Sobic.007G135900 basic helix-loop-helix, putative, expressed -
3 Sobic.002G008200 flavin-containing monooxygenase family protein, putative, expressed -
4 Sobic.005G110466 - K14638: SLC15A3_4, solute carrier family 15 (peptide/histidine transporter), member 3/4
5 Sobic.002G059600 OsFBX237 - F-box domain containing protein, expressed -
6 Sobic.001G227100 zinc finger family protein, putative, expressed -
7 Sobic.006G082700 expressed protein -
8 Sobic.007G142100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@transferase family protein, putative, expressed K13065: E2.3.1.133, shikimate O-hydroxycinnamoyltransferase
9 Sobic.009G227000 expressed protein -
10 Sobic.003G355700 BBTI13 - Bowman-Birk type bran trypsin inhibitor precursor, expressed -
11 Sobic.002G029200 - -
12 Sobic.005G129501 - -
13 Sobic.010G109700 myb-like DNA-binding domain, SHAQKYF class family protein, expressed -
14 Sobic.001G249233 - -
15 Sobic.005G056100 - -
16 Sobic.005G174900 - -
17 Sobic.007G075351 - -
18 Sobic.007G025300 helix-loop-helix DNA-binding domain containing protein, expressed -
19 Sobic.010G034900 expressed protein -
20 Sobic.002G089400 DEF8 - Defensin and Defensin-like DEFL family, expressed -


Gene co-expression network
sample Sobic003G088900 Sobic003G088900 Sobic002G139900 Sobic002G139900 Sobic003G088900--Sobic002G139900 Sobic007G135900 Sobic007G135900 Sobic003G088900--Sobic007G135900 Sobic002G008200 Sobic002G008200 Sobic003G088900--Sobic002G008200 Sobic005G110466 Sobic005G110466 Sobic003G088900--Sobic005G110466 Sobic002G059600 Sobic002G059600 Sobic003G088900--Sobic002G059600 Sobic001G227100 Sobic001G227100 Sobic003G088900--Sobic001G227100 Sobic006G082700 Sobic006G082700 Sobic003G088900--Sobic006G082700 Sobic007G142100 Sobic007G142100 Sobic003G088900--Sobic007G142100 Sobic009G227000 Sobic009G227000 Sobic003G088900--Sobic009G227000 Sobic003G355700 Sobic003G355700 Sobic002G139900--Sobic003G355700 Sobic010G010600 Sobic010G010600 Sobic002G139900--Sobic010G010600 Sobic001G297300 Sobic001G297300 Sobic002G139900--Sobic001G297300 Sobic007G209700 Sobic007G209700 Sobic002G139900--Sobic007G209700 Sobic007G123000 Sobic007G123000 Sobic002G139900--Sobic007G123000 Sobic001G059800 Sobic001G059800 Sobic002G139900--Sobic001G059800 Sobic010G216800 Sobic010G216800 Sobic002G139900--Sobic010G216800 Sobic003G307600 Sobic003G307600 Sobic002G139900--Sobic003G307600 Sobic002G408700 Sobic002G408700 Sobic002G139900--Sobic002G408700 Sobic002G241000 Sobic002G241000 Sobic007G135900--Sobic002G241000 Sobic004G232600 Sobic004G232600 Sobic007G135900--Sobic004G232600 Sobic007G135900--Sobic006G082700 Sobic007G135900--Sobic002G059600 Sobic007G135900--Sobic003G088900 Sobic010G212000 Sobic010G212000 Sobic007G135900--Sobic010G212000 Sobic007G135900--Sobic001G227100 Sobic007G073900 Sobic007G073900 Sobic007G135900--Sobic007G073900 Sobic005G226000 Sobic005G226000 Sobic007G135900--Sobic005G226000 Sobic007G075351 Sobic007G075351 Sobic002G008200--Sobic007G075351 Sobic001G368900 Sobic001G368900 Sobic002G008200--Sobic001G368900 Sobic002G008200--Sobic009G227000 Sobic005G112066 Sobic005G112066 Sobic002G008200--Sobic005G112066 Sobic006G031600 Sobic006G031600 Sobic002G008200--Sobic006G031600 Sobic007G156300 Sobic007G156300 Sobic002G008200--Sobic007G156300 Sobic001G326000 Sobic001G326000 Sobic002G008200--Sobic001G326000 Sobic002G077500 Sobic002G077500 Sobic002G008200--Sobic002G077500 Sobic007G049400 Sobic007G049400 Sobic002G008200--Sobic007G049400 Sobic002G357950 Sobic002G357950 Sobic005G110466--Sobic002G357950 Sobic004G256400 Sobic004G256400 Sobic005G110466--Sobic004G256400 Sobic010G200200 Sobic010G200200 Sobic005G110466--Sobic010G200200 Sobic004G142000 Sobic004G142000 Sobic005G110466--Sobic004G142000 Sobic001G259250 Sobic001G259250 Sobic005G110466--Sobic001G259250 Sobic005G153200 Sobic005G153200 Sobic005G110466--Sobic005G153200 Sobic002G338600 Sobic002G338600 Sobic005G110466--Sobic002G338600 Sobic007G205100 Sobic007G205100 Sobic005G110466--Sobic007G205100 Sobic002G028100 Sobic002G028100 Sobic005G110466--Sobic002G028100 Sobic002G059600--Sobic003G355700 Sobic002G059600--Sobic002G139900 Sobic002G089500 Sobic002G089500 Sobic002G059600--Sobic002G089500 Sobic005G021100 Sobic005G021100 Sobic002G059600--Sobic005G021100 Sobic004G171600 Sobic004G171600 Sobic002G059600--Sobic004G171600 Sobic001G392900 Sobic001G392900 Sobic002G059600--Sobic001G392900 Sobic002G007700 Sobic002G007700 Sobic002G059600--Sobic002G007700 Sobic005G077900 Sobic005G077900 Sobic002G059600--Sobic005G077900 Sobic001G233600 Sobic001G233600 Sobic002G059600--Sobic001G233600 Sobic001G227100--Sobic002G241000 Sobic003G342000 Sobic003G342000 Sobic001G227100--Sobic003G342000 Sobic005G085700 Sobic005G085700 Sobic001G227100--Sobic005G085700 Sobic009G010000 Sobic009G010000 Sobic001G227100--Sobic009G010000 Sobic003G392500 Sobic003G392500 Sobic001G227100--Sobic003G392500 Sobic009G071900 Sobic009G071900 Sobic001G227100--Sobic009G071900 Sobic007G001600 Sobic007G001600 Sobic001G227100--Sobic007G001600 Sobic005G199300 Sobic005G199300 Sobic001G227100--Sobic005G199300 Sobic002G370300 Sobic002G370300 Sobic001G227100--Sobic002G370300 Sobic006G082700--Sobic002G241000 Sobic006G082700--Sobic007G135900 Sobic002G058600 Sobic002G058600 Sobic006G082700--Sobic002G058600 Sobic006G082700--Sobic001G227100 Sobic006G082700--Sobic007G142100 Sobic001G513100 Sobic001G513100 Sobic006G082700--Sobic001G513100 Sobic006G082700--Sobic003G088900 Sobic002G038400 Sobic002G038400 Sobic006G082700--Sobic002G038400 Sobic007G038900 Sobic007G038900 Sobic006G082700--Sobic007G038900 Sobic001G192400 Sobic001G192400 Sobic007G142100--Sobic001G192400 Sobic001G118600 Sobic001G118600 Sobic007G142100--Sobic001G118600 Sobic001G124400 Sobic001G124400 Sobic007G142100--Sobic001G124400 Sobic002G405000 Sobic002G405000 Sobic007G142100--Sobic002G405000 Sobic007G142100--Sobic006G082700 Sobic001G221350 Sobic001G221350 Sobic007G142100--Sobic001G221350 Sobic007G142100--Sobic003G088900 Sobic009G112000 Sobic009G112000 Sobic007G142100--Sobic009G112000 Sobic005G044900 Sobic005G044900 Sobic007G142100--Sobic005G044900 Sobic003G156100 Sobic003G156100 Sobic009G227000--Sobic003G156100 Sobic007G083300 Sobic007G083300 Sobic009G227000--Sobic007G083300 Sobic007G070700 Sobic007G070700 Sobic009G227000--Sobic007G070700 Sobic003G247700 Sobic003G247700 Sobic009G227000--Sobic003G247700 Sobic006G018400 Sobic006G018400 Sobic009G227000--Sobic006G018400 Sobic008G064000 Sobic008G064000 Sobic009G227000--Sobic008G064000 SobicK043500 SobicK043500 Sobic009G227000--SobicK043500 Sobic002G211700 Sobic002G211700 Sobic009G227000--Sobic002G211700 Sobic001G535900 Sobic001G535900 Sobic009G227000--Sobic001G535900
Octagon: transcription factors


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