Gene annotation
Transcriptome id Sobic.007G142100.1
Synonym HCT, Sb07g021750
Functional annotation SAG (Senescence-associated gene): differentially expressed gene during developmental senescence. (PubMedID : 27586543)
transferase family protein, putative, expressed
UniProt C5YLM3
Pfam PF02458
Panther DB PTHR31642 PTHR31642:SF25
NCBI CDD -
KEGG Orthology K13065; E2.3.1.133, shikimate O-hydroxycinnamoyltransferase
Gene Ontology GO:0016747; transferase activity, transferring acyl groups other than amino-acyl groups


Orthologs (automatic annotation)
TAIR AT5G48930 : hydroxycinnamoyl-CoA shikimate/quinate hydroxycinnamoyl transferase
RAP-DB (Rice) LOC_Os09g25460.1 : transferase family protein, putative, expressed
MaizeGDB (Corn) Zm00025a031204 , Zm00025a047051 , Zm00025a005843
Brachypodium KQJ90283 , KQJ98426 , PNT64606
Barley HORVU7Hr1G118090.4 , HORVU7Hr1G118090.2 , HORVU7Hr1G118090.3 , HORVU7Hr1G118090.1
Wheat TraesCS7D02G524200 , TraesCS5B02G221700 , TraesCS7B02G455100 , TraesCS5D02G230500 , TraesCS5A02G222700 , TraesCS7A02G537300
Populus -


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cDNA sequences
Sobic.007G142100


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G192400 OsFBDUF49 - F-box and DUF domain containing protein, expressed -
2 Sobic.001G118600 Up-reguralion under heat(PubMedID : 24916767)@Up-reguralion under combine stress of drought and heat(PubMedID : 24916767)@DnaK family protein, putative, expressed K09490: HSPA5, endoplasmic reticulum chaperone BiP
3 Sobic.001G124400 expressed protein -
4 Sobic.002G405000 cis-zeatin O-glucosyltransferase, putative, expressed K13495: cis-zeatin O-glucosyltransferase
5 Sobic.006G082700 expressed protein -
6 Sobic.001G221350 - -
7 Sobic.003G088900 multicopper oxidase domain containing protein, expressed -
8 Sobic.009G112000 OsFBO5 - F-box and other domain containing protein, expressed -
9 Sobic.005G044900 tetratricopeptide-like helical, putative, expressed -
10 Sobic.005G126900 - -
11 Sobic.008G064750 - -
12 Sobic.005G110466 - K14638: SLC15A3_4, solute carrier family 15 (peptide/histidine transporter), member 3/4
13 Sobic.001G175400 - -
14 Sobic.004G208000 isochorismatase family protein, putative, expressed -
15 Sobic.002G139900 CSLA1 - cellulose synthase-like family A@ mannan synthase, expressed K13680: beta-mannan synthase
16 Sobic.002G241000 expressed protein -
17 Sobic.007G010100 expressed protein -
18 Sobic.009G184300 AP2 domain containing protein, expressed -
19 Sobic.002G373900 lung seven transmembrane domain containing protein, putative, expressed -
20 Sobic.010G077200 growth regulating factor protein, putative, expressed -


Gene co-expression network
sample Sobic007G142100 Sobic007G142100 Sobic001G192400 Sobic001G192400 Sobic007G142100--Sobic001G192400 Sobic001G118600 Sobic001G118600 Sobic007G142100--Sobic001G118600 Sobic001G124400 Sobic001G124400 Sobic007G142100--Sobic001G124400 Sobic002G405000 Sobic002G405000 Sobic007G142100--Sobic002G405000 Sobic006G082700 Sobic006G082700 Sobic007G142100--Sobic006G082700 Sobic001G221350 Sobic001G221350 Sobic007G142100--Sobic001G221350 Sobic003G088900 Sobic003G088900 Sobic007G142100--Sobic003G088900 Sobic009G112000 Sobic009G112000 Sobic007G142100--Sobic009G112000 Sobic005G044900 Sobic005G044900 Sobic007G142100--Sobic005G044900 Sobic001G192400--Sobic002G405000 Sobic005G126900 Sobic005G126900 Sobic001G192400--Sobic005G126900 Sobic001G192400--Sobic001G118600 Sobic003G393400 Sobic003G393400 Sobic001G192400--Sobic003G393400 Sobic009G092200 Sobic009G092200 Sobic001G192400--Sobic009G092200 Sobic010G163200 Sobic010G163200 Sobic001G192400--Sobic010G163200 Sobic001G192400--Sobic007G142100 Sobic002G373900 Sobic002G373900 Sobic001G192400--Sobic002G373900 Sobic001G515400 Sobic001G515400 Sobic001G192400--Sobic001G515400 Sobic001G118600--Sobic005G126900 Sobic004G208000 Sobic004G208000 Sobic001G118600--Sobic004G208000 Sobic005G167450 Sobic005G167450 Sobic001G118600--Sobic005G167450 Sobic004G044401 Sobic004G044401 Sobic001G118600--Sobic004G044401 Sobic001G217800 Sobic001G217800 Sobic001G118600--Sobic001G217800 Sobic002G275400 Sobic002G275400 Sobic001G118600--Sobic002G275400 Sobic003G412500 Sobic003G412500 Sobic001G118600--Sobic003G412500 Sobic001G118600--Sobic002G373900 Sobic005G101400 Sobic005G101400 Sobic001G118600--Sobic005G101400 Sobic002G072050 Sobic002G072050 Sobic001G124400--Sobic002G072050 Sobic003G226600 Sobic003G226600 Sobic001G124400--Sobic003G226600 Sobic010G169950 Sobic010G169950 Sobic001G124400--Sobic010G169950 Sobic002G204050 Sobic002G204050 Sobic001G124400--Sobic002G204050 Sobic007G115700 Sobic007G115700 Sobic001G124400--Sobic007G115700 Sobic004G160350 Sobic004G160350 Sobic001G124400--Sobic004G160350 Sobic002G401533 Sobic002G401533 Sobic001G124400--Sobic002G401533 Sobic007G056300 Sobic007G056300 Sobic001G124400--Sobic007G056300 Sobic001G360300 Sobic001G360300 Sobic001G124400--Sobic001G360300 Sobic002G405000--Sobic001G360300 Sobic004G007032 Sobic004G007032 Sobic002G405000--Sobic004G007032 Sobic009G184300 Sobic009G184300 Sobic002G405000--Sobic009G184300 Sobic002G405000--Sobic001G192400 Sobic002G405000--Sobic004G208000 Sobic002G405000--Sobic001G118600 Sobic002G316301 Sobic002G316301 Sobic002G405000--Sobic002G316301 Sobic006G156500 Sobic006G156500 Sobic002G405000--Sobic006G156500 Sobic002G405000--Sobic005G044900 Sobic002G241000 Sobic002G241000 Sobic006G082700--Sobic002G241000 Sobic007G135900 Sobic007G135900 Sobic006G082700--Sobic007G135900 Sobic002G058600 Sobic002G058600 Sobic006G082700--Sobic002G058600 Sobic001G227100 Sobic001G227100 Sobic006G082700--Sobic001G227100 Sobic006G082700--Sobic007G142100 Sobic001G513100 Sobic001G513100 Sobic006G082700--Sobic001G513100 Sobic006G082700--Sobic003G088900 Sobic002G038400 Sobic002G038400 Sobic006G082700--Sobic002G038400 Sobic007G038900 Sobic007G038900 Sobic006G082700--Sobic007G038900 Sobic001G221350--Sobic009G112000 Sobic005G110466 Sobic005G110466 Sobic001G221350--Sobic005G110466 Sobic007G150500 Sobic007G150500 Sobic001G221350--Sobic007G150500 Sobic005G149300 Sobic005G149300 Sobic001G221350--Sobic005G149300 Sobic002G357950 Sobic002G357950 Sobic001G221350--Sobic002G357950 Sobic003G355700 Sobic003G355700 Sobic001G221350--Sobic003G355700 Sobic002G139900 Sobic002G139900 Sobic001G221350--Sobic002G139900 Sobic005G100400 Sobic005G100400 Sobic001G221350--Sobic005G100400 Sobic010G133225 Sobic010G133225 Sobic001G221350--Sobic010G133225 Sobic003G088900--Sobic002G139900 Sobic003G088900--Sobic007G135900 Sobic002G008200 Sobic002G008200 Sobic003G088900--Sobic002G008200 Sobic003G088900--Sobic005G110466 Sobic002G059600 Sobic002G059600 Sobic003G088900--Sobic002G059600 Sobic003G088900--Sobic001G227100 Sobic003G088900--Sobic006G082700 Sobic003G088900--Sobic007G142100 Sobic009G227000 Sobic009G227000 Sobic003G088900--Sobic009G227000 Sobic009G112000--Sobic001G221350 Sobic009G112000--Sobic010G133225 Sobic003G255850 Sobic003G255850 Sobic009G112000--Sobic003G255850 Sobic003G172450 Sobic003G172450 Sobic009G112000--Sobic003G172450 Sobic010G107901 Sobic010G107901 Sobic009G112000--Sobic010G107901 Sobic004G234766 Sobic004G234766 Sobic009G112000--Sobic004G234766 Sobic002G397700 Sobic002G397700 Sobic009G112000--Sobic002G397700 Sobic008G024900 Sobic008G024900 Sobic009G112000--Sobic008G024900 Sobic007G010100 Sobic007G010100 Sobic009G112000--Sobic007G010100 Sobic005G044900--Sobic004G007032 Sobic008G064750 Sobic008G064750 Sobic005G044900--Sobic008G064750 Sobic009G031000 Sobic009G031000 Sobic005G044900--Sobic009G031000 Sobic004G125600 Sobic004G125600 Sobic005G044900--Sobic004G125600 Sobic003G386400 Sobic003G386400 Sobic005G044900--Sobic003G386400 Sobic003G253900 Sobic003G253900 Sobic005G044900--Sobic003G253900 Sobic003G439200 Sobic003G439200 Sobic005G044900--Sobic003G439200 Sobic002G331050 Sobic002G331050 Sobic005G044900--Sobic002G331050 Sobic005G044900--Sobic004G208000
Octagon: transcription factors


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