Gene annotation
Transcriptome id Sobic.001G192400.1
Synonym Sb01g016940
Functional annotation OsFBDUF49 - F-box and DUF domain containing protein, expressed
UniProt C5WVC2
Pfam PF03478
Panther DB PTHR36901 PTHR36901:SF1
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT2G17030 : F-box family protein with a domain of unknown function (DUF295)
RAP-DB (Rice) LOC_Os10g37570.1 : OsFBDUF49 - F-box and DUF domain containing protein, expressed
MaizeGDB (Corn) Zm00025a006279
Brachypodium -
Barley -
Wheat -
Populus -


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cDNA sequences
Sobic.001G192400


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G405000 cis-zeatin O-glucosyltransferase, putative, expressed K13495: cis-zeatin O-glucosyltransferase
2 Sobic.005G126900 - -
3 Sobic.001G118600 Up-reguralion under heat(PubMedID : 24916767)@Up-reguralion under combine stress of drought and heat(PubMedID : 24916767)@DnaK family protein, putative, expressed K09490: HSPA5, endoplasmic reticulum chaperone BiP
4 Sobic.003G393400 exo70 exocyst complex subunit domain containing protein, expressed -
5 Sobic.009G092200 - -
6 Sobic.010G163200 - -
7 Sobic.007G142100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@transferase family protein, putative, expressed K13065: E2.3.1.133, shikimate O-hydroxycinnamoyltransferase
8 Sobic.002G373900 lung seven transmembrane domain containing protein, putative, expressed -
9 Sobic.001G515400 AMP-binding enzyme, putative, expressed -
10 Sobic.006G233800 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@Transferase family protein (At)(PubMedID : 27208977)@transferase family protein, putative, expressed -
11 Sobic.007G077300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@Not investigated(PubMedID : 23766026)@AP2 domain containing protein, expressed -
12 Sobic.010G077200 growth regulating factor protein, putative, expressed -
13 Sobic.004G243000 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@metalloendoproteinase 1 precursor, putative, expressed -
14 Sobic.001G073800 receptor-like kinase, putative, expressed -
15 Sobic.008G139100 MLA12, putative, expressed -
16 Sobic.003G156800 - -
17 Sobic.004G044401 - -
18 Sobic.003G123500 - -
19 Sobic.005G008400 pentatricopeptide, putative, expressed -
20 Sobic.003G166400 - K02911: RP-L32, MRPL32, large subunit ribosomal protein L32


Gene co-expression network
sample Sobic001G192400 Sobic001G192400 Sobic002G405000 Sobic002G405000 Sobic001G192400--Sobic002G405000 Sobic005G126900 Sobic005G126900 Sobic001G192400--Sobic005G126900 Sobic001G118600 Sobic001G118600 Sobic001G192400--Sobic001G118600 Sobic003G393400 Sobic003G393400 Sobic001G192400--Sobic003G393400 Sobic009G092200 Sobic009G092200 Sobic001G192400--Sobic009G092200 Sobic010G163200 Sobic010G163200 Sobic001G192400--Sobic010G163200 Sobic007G142100 Sobic007G142100 Sobic001G192400--Sobic007G142100 Sobic002G373900 Sobic002G373900 Sobic001G192400--Sobic002G373900 Sobic001G515400 Sobic001G515400 Sobic001G192400--Sobic001G515400 Sobic001G360300 Sobic001G360300 Sobic002G405000--Sobic001G360300 Sobic004G007032 Sobic004G007032 Sobic002G405000--Sobic004G007032 Sobic009G184300 Sobic009G184300 Sobic002G405000--Sobic009G184300 Sobic002G405000--Sobic001G192400 Sobic004G208000 Sobic004G208000 Sobic002G405000--Sobic004G208000 Sobic002G405000--Sobic001G118600 Sobic002G316301 Sobic002G316301 Sobic002G405000--Sobic002G316301 Sobic006G156500 Sobic006G156500 Sobic002G405000--Sobic006G156500 Sobic005G044900 Sobic005G044900 Sobic002G405000--Sobic005G044900 Sobic004G044401 Sobic004G044401 Sobic005G126900--Sobic004G044401 Sobic005G101400 Sobic005G101400 Sobic005G126900--Sobic005G101400 Sobic004G272500 Sobic004G272500 Sobic005G126900--Sobic004G272500 Sobic005G167450 Sobic005G167450 Sobic005G126900--Sobic005G167450 Sobic001G217800 Sobic001G217800 Sobic005G126900--Sobic001G217800 Sobic007G085966 Sobic007G085966 Sobic005G126900--Sobic007G085966 Sobic003G166400 Sobic003G166400 Sobic005G126900--Sobic003G166400 Sobic005G126900--Sobic001G118600 Sobic009G069450 Sobic009G069450 Sobic005G126900--Sobic009G069450 Sobic001G118600--Sobic005G126900 Sobic001G118600--Sobic004G208000 Sobic001G118600--Sobic005G167450 Sobic001G118600--Sobic004G044401 Sobic001G118600--Sobic001G217800 Sobic002G275400 Sobic002G275400 Sobic001G118600--Sobic002G275400 Sobic003G412500 Sobic003G412500 Sobic001G118600--Sobic003G412500 Sobic001G118600--Sobic002G373900 Sobic001G118600--Sobic005G101400 Sobic007G181900 Sobic007G181900 Sobic003G393400--Sobic007G181900 Sobic003G393400--Sobic010G163200 Sobic003G393400--Sobic009G184300 Sobic001G423600 Sobic001G423600 Sobic003G393400--Sobic001G423600 Sobic003G272200 Sobic003G272200 Sobic003G393400--Sobic003G272200 Sobic003G393400--Sobic001G192400 Sobic003G393400--Sobic005G126900 Sobic003G393400--Sobic004G208000 Sobic003G393400--Sobic002G405000 Sobic006G030250 Sobic006G030250 Sobic009G092200--Sobic006G030250 Sobic010G127500 Sobic010G127500 Sobic009G092200--Sobic010G127500 Sobic008G091100 Sobic008G091100 Sobic009G092200--Sobic008G091100 Sobic001G317900 Sobic001G317900 Sobic009G092200--Sobic001G317900 Sobic005G083932 Sobic005G083932 Sobic009G092200--Sobic005G083932 Sobic002G191200 Sobic002G191200 Sobic009G092200--Sobic002G191200 Sobic010G163200--Sobic004G044401 Sobic009G192450 Sobic009G192450 Sobic010G163200--Sobic009G192450 Sobic002G072050 Sobic002G072050 Sobic010G163200--Sobic002G072050 Sobic010G163200--Sobic005G126900 Sobic004G160350 Sobic004G160350 Sobic010G163200--Sobic004G160350 Sobic002G155800 Sobic002G155800 Sobic010G163200--Sobic002G155800 Sobic010G163200--Sobic004G208000 Sobic003G313600 Sobic003G313600 Sobic010G163200--Sobic003G313600 Sobic001G485901 Sobic001G485901 Sobic010G163200--Sobic001G485901 Sobic007G142100--Sobic001G192400 Sobic007G142100--Sobic001G118600 Sobic001G124400 Sobic001G124400 Sobic007G142100--Sobic001G124400 Sobic007G142100--Sobic002G405000 Sobic006G082700 Sobic006G082700 Sobic007G142100--Sobic006G082700 Sobic001G221350 Sobic001G221350 Sobic007G142100--Sobic001G221350 Sobic003G088900 Sobic003G088900 Sobic007G142100--Sobic003G088900 Sobic009G112000 Sobic009G112000 Sobic007G142100--Sobic009G112000 Sobic007G142100--Sobic005G044900 Sobic006G233800 Sobic006G233800 Sobic002G373900--Sobic006G233800 Sobic004G191901 Sobic004G191901 Sobic002G373900--Sobic004G191901 Sobic009G074200 Sobic009G074200 Sobic002G373900--Sobic009G074200 Sobic003G249500 Sobic003G249500 Sobic002G373900--Sobic003G249500 Sobic002G385601 Sobic002G385601 Sobic002G373900--Sobic002G385601 Sobic003G352000 Sobic003G352000 Sobic002G373900--Sobic003G352000 Sobic001G450900 Sobic001G450900 Sobic002G373900--Sobic001G450900 SobicK029400 SobicK029400 Sobic002G373900--SobicK029400 Sobic006G057100 Sobic006G057100 Sobic002G373900--Sobic006G057100 Sobic004G198701 Sobic004G198701 Sobic001G515400--Sobic004G198701 Sobic003G168350 Sobic003G168350 Sobic001G515400--Sobic003G168350 Sobic003G200400 Sobic003G200400 Sobic001G515400--Sobic003G200400 Sobic005G008400 Sobic005G008400 Sobic001G515400--Sobic005G008400 Sobic001G365332 Sobic001G365332 Sobic001G515400--Sobic001G365332 Sobic002G014900 Sobic002G014900 Sobic001G515400--Sobic002G014900 Sobic006G005550 Sobic006G005550 Sobic001G515400--Sobic006G005550 Sobic008G157700 Sobic008G157700 Sobic001G515400--Sobic008G157700 Sobic004G346700 Sobic004G346700 Sobic001G515400--Sobic004G346700
Octagon: transcription factors


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