Gene annotation
Transcriptome id Sobic.006G082700.2
Synonym
Functional annotation expressed protein
UniProt A0A1Z5RCY8
Pfam PF14542
Panther DB PTHR31435
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G21770 : Acyl-CoA N-acyltransferases (NAT) superfamily protein
RAP-DB (Rice) LOC_Os04g35200.1 : expressed protein
MaizeGDB (Corn) Zm00025a011370
Brachypodium -
Barley HORVU2Hr1G075330.5 , HORVU2Hr1G075330.4 , HORVU2Hr1G075330.2 , HORVU2Hr1G075330.1
Wheat TraesCS2B02G320200 , TraesCS2A02G303600
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G241000 expressed protein -
2 Sobic.007G135900 basic helix-loop-helix, putative, expressed -
3 Sobic.002G058600 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@OsFBX237 - F-box domain containing protein, expressed -
4 Sobic.001G227100 zinc finger family protein, putative, expressed -
5 Sobic.007G142100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@transferase family protein, putative, expressed K13065: E2.3.1.133, shikimate O-hydroxycinnamoyltransferase
6 Sobic.001G513100 LYR motif containing protein, putative, expressed -
7 Sobic.003G088900 multicopper oxidase domain containing protein, expressed -
8 Sobic.002G038400 expressed protein -
9 Sobic.007G038900 expressed protein -
10 Sobic.004G063750 - -
11 Sobic.002G287500 RNA recognition motif containing protein, expressed K13154: U11/U12 small nuclear ribonucleoprotein 31 kDa protein
12 Sobic.010G212000 haemolysin-III, putative, expressed K07297: adiponectin receptor
13 Sobic.007G073900 histone-lysine N-methyltransferase ASHR2, putative, expressed K11426: [histone H3]-lysine4/36 N-trimethyltransferase SMYD
14 Sobic.002G366700 expressed protein -
15 Sobic.002G059600 OsFBX237 - F-box domain containing protein, expressed -
16 Sobic.002G008200 flavin-containing monooxygenase family protein, putative, expressed -
17 Sobic.010G087200 expressed protein -
18 Sobic.009G041100 expressed protein -
19 Sobic.003G421900 glycosyl hydrolases family 17, putative, expressed -
20 Sobic.002G240800 - -


Gene co-expression network
sample Sobic006G082700 Sobic006G082700 Sobic002G241000 Sobic002G241000 Sobic006G082700--Sobic002G241000 Sobic007G135900 Sobic007G135900 Sobic006G082700--Sobic007G135900 Sobic002G058600 Sobic002G058600 Sobic006G082700--Sobic002G058600 Sobic001G227100 Sobic001G227100 Sobic006G082700--Sobic001G227100 Sobic007G142100 Sobic007G142100 Sobic006G082700--Sobic007G142100 Sobic001G513100 Sobic001G513100 Sobic006G082700--Sobic001G513100 Sobic003G088900 Sobic003G088900 Sobic006G082700--Sobic003G088900 Sobic002G038400 Sobic002G038400 Sobic006G082700--Sobic002G038400 Sobic007G038900 Sobic007G038900 Sobic006G082700--Sobic007G038900 Sobic002G241000--Sobic001G227100 Sobic004G063750 Sobic004G063750 Sobic002G241000--Sobic004G063750 Sobic002G241000--Sobic006G082700 Sobic002G241000--Sobic007G135900 Sobic002G059600 Sobic002G059600 Sobic002G241000--Sobic002G059600 Sobic003G438200 Sobic003G438200 Sobic002G241000--Sobic003G438200 Sobic001G298100 Sobic001G298100 Sobic002G241000--Sobic001G298100 Sobic002G295000 Sobic002G295000 Sobic002G241000--Sobic002G295000 Sobic010G212000 Sobic010G212000 Sobic002G241000--Sobic010G212000 Sobic007G135900--Sobic002G241000 Sobic004G232600 Sobic004G232600 Sobic007G135900--Sobic004G232600 Sobic007G135900--Sobic006G082700 Sobic007G135900--Sobic002G059600 Sobic007G135900--Sobic003G088900 Sobic007G135900--Sobic010G212000 Sobic007G135900--Sobic001G227100 Sobic007G073900 Sobic007G073900 Sobic007G135900--Sobic007G073900 Sobic005G226000 Sobic005G226000 Sobic007G135900--Sobic005G226000 Sobic002G366700 Sobic002G366700 Sobic002G058600--Sobic002G366700 Sobic002G058600--Sobic007G038900 Sobic002G058600--Sobic001G513100 Sobic002G287500 Sobic002G287500 Sobic002G058600--Sobic002G287500 Sobic001G494150 Sobic001G494150 Sobic002G058600--Sobic001G494150 Sobic006G278600 Sobic006G278600 Sobic002G058600--Sobic006G278600 Sobic010G087200 Sobic010G087200 Sobic002G058600--Sobic010G087200 Sobic009G236500 Sobic009G236500 Sobic002G058600--Sobic009G236500 Sobic003G008300 Sobic003G008300 Sobic002G058600--Sobic003G008300 Sobic001G227100--Sobic002G241000 Sobic003G342000 Sobic003G342000 Sobic001G227100--Sobic003G342000 Sobic005G085700 Sobic005G085700 Sobic001G227100--Sobic005G085700 Sobic009G010000 Sobic009G010000 Sobic001G227100--Sobic009G010000 Sobic003G392500 Sobic003G392500 Sobic001G227100--Sobic003G392500 Sobic009G071900 Sobic009G071900 Sobic001G227100--Sobic009G071900 Sobic007G001600 Sobic007G001600 Sobic001G227100--Sobic007G001600 Sobic005G199300 Sobic005G199300 Sobic001G227100--Sobic005G199300 Sobic002G370300 Sobic002G370300 Sobic001G227100--Sobic002G370300 Sobic001G192400 Sobic001G192400 Sobic007G142100--Sobic001G192400 Sobic001G118600 Sobic001G118600 Sobic007G142100--Sobic001G118600 Sobic001G124400 Sobic001G124400 Sobic007G142100--Sobic001G124400 Sobic002G405000 Sobic002G405000 Sobic007G142100--Sobic002G405000 Sobic007G142100--Sobic006G082700 Sobic001G221350 Sobic001G221350 Sobic007G142100--Sobic001G221350 Sobic007G142100--Sobic003G088900 Sobic009G112000 Sobic009G112000 Sobic007G142100--Sobic009G112000 Sobic005G044900 Sobic005G044900 Sobic007G142100--Sobic005G044900 Sobic001G513100--Sobic002G366700 Sobic001G513100--Sobic003G008300 Sobic001G513100--Sobic002G058600 Sobic002G339400 Sobic002G339400 Sobic001G513100--Sobic002G339400 Sobic001G513100--Sobic001G494150 Sobic001G513100--Sobic010G087200 Sobic001G428700 Sobic001G428700 Sobic001G513100--Sobic001G428700 Sobic003G118900 Sobic003G118900 Sobic001G513100--Sobic003G118900 Sobic004G180600 Sobic004G180600 Sobic001G513100--Sobic004G180600 Sobic002G139900 Sobic002G139900 Sobic003G088900--Sobic002G139900 Sobic003G088900--Sobic007G135900 Sobic002G008200 Sobic002G008200 Sobic003G088900--Sobic002G008200 Sobic005G110466 Sobic005G110466 Sobic003G088900--Sobic005G110466 Sobic003G088900--Sobic002G059600 Sobic003G088900--Sobic001G227100 Sobic003G088900--Sobic006G082700 Sobic003G088900--Sobic007G142100 Sobic009G227000 Sobic009G227000 Sobic003G088900--Sobic009G227000 Sobic007G076800 Sobic007G076800 Sobic002G038400--Sobic007G076800 Sobic002G038400--Sobic002G366700 Sobic002G038400--Sobic002G339400 Sobic002G038400--Sobic010G087200 Sobic002G038400--Sobic001G494150 Sobic002G282100 Sobic002G282100 Sobic002G038400--Sobic002G282100 Sobic007G206700 Sobic007G206700 Sobic002G038400--Sobic007G206700 Sobic002G038400--Sobic001G428700 Sobic006G186200 Sobic006G186200 Sobic002G038400--Sobic006G186200 Sobic007G038900--Sobic002G287500 Sobic007G038900--Sobic002G058600 Sobic007G038900--Sobic006G278600 Sobic007G038900--Sobic004G063750 Sobic004G295400 Sobic004G295400 Sobic007G038900--Sobic004G295400 Sobic004G089700 Sobic004G089700 Sobic007G038900--Sobic004G089700 Sobic002G173600 Sobic002G173600 Sobic007G038900--Sobic002G173600 Sobic004G206900 Sobic004G206900 Sobic007G038900--Sobic004G206900 Sobic009G187500 Sobic009G187500 Sobic007G038900--Sobic009G187500
Octagon: transcription factors


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