Gene annotation
Transcriptome id Sobic.003G092100.1
Synonym
Functional annotation -
UniProt A0A1B6Q283
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) -
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


JBrowse

Open New Page


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.007G105700 glycosyl transferase 8 domain containing protein, putative, expressed K13648: alpha-1,4-galacturonosyltransferase
2 Sobic.010G009700 OsFBX182 - F-box domain containing protein, expressed -
3 Sobic.009G152140 - -
4 Sobic.003G285700 ATP binding protein, putative, expressed -
5 Sobic.005G067966 - -
6 Sobic.007G153500 metal cation transporter, putative, expressed K14713: SLC39A7, KE4, solute carrier family 39 (zinc transporter), member 7
7 Sobic.006G119900 zinc finger, ZZ type family protein, expressed K17987: next to BRCA1 gene 1 protein
8 Sobic.006G189000 ubiquitin-conjugating enzyme, putative, expressed K10577: UBE2I, ubiquitin-conjugating enzyme E2 I
9 Sobic.003G301800 "C3 PTPC, unknown so far"(PubMedID : 2308851)@phosphoenolphyruvate carboxylase(PubMedID : 26904072)@phosphoenolpyruvate carboxylase, putative, expressed K01595: phosphoenolpyruvate carboxylase
10 Sobic.002G392400 expressed protein -
11 Sobic.007G034200 expressed protein K10875: RAD54L, DNA repair and recombination protein RAD54 and RAD54-like protein
12 Sobic.001G131900 glycosyl transferase family 8, putative, expressed K13648: alpha-1,4-galacturonosyltransferase
13 Sobic.009G120400 methyltransferase, putative, expressed -
14 Sobic.003G293400 oligosaccharyl transferase, putative, expressed K07151: dolichyl-diphosphooligosaccharide---protein glycosyltransferase
15 Sobic.009G040325 - -
16 Sobic.002G274700 glycosyl transferase family 8, putative, expressed K13648: alpha-1,4-galacturonosyltransferase
17 Sobic.005G087300 protein kinase family protein, putative, expressed -
18 Sobic.005G060100 growth regulator related protein, putative, expressed -
19 Sobic.001G076600 hydrolase, acting on carbon-nitrogen, putative, expressed -
20 Sobic.009G054400 ECT protein, putative, expressed -


Gene co-expression network
sample Sobic003G092100 Sobic003G092100 Sobic007G105700 Sobic007G105700 Sobic003G092100--Sobic007G105700 Sobic010G009700 Sobic010G009700 Sobic003G092100--Sobic010G009700 Sobic009G152140 Sobic009G152140 Sobic003G092100--Sobic009G152140 Sobic003G285700 Sobic003G285700 Sobic003G092100--Sobic003G285700 Sobic005G067966 Sobic005G067966 Sobic003G092100--Sobic005G067966 Sobic007G153500 Sobic007G153500 Sobic003G092100--Sobic007G153500 Sobic006G119900 Sobic006G119900 Sobic003G092100--Sobic006G119900 Sobic006G189000 Sobic006G189000 Sobic003G092100--Sobic006G189000 Sobic003G301800 Sobic003G301800 Sobic003G092100--Sobic003G301800 Sobic002G392400 Sobic002G392400 Sobic007G105700--Sobic002G392400 Sobic002G308000 Sobic002G308000 Sobic007G105700--Sobic002G308000 Sobic005G060100 Sobic005G060100 Sobic007G105700--Sobic005G060100 Sobic001G433600 Sobic001G433600 Sobic007G105700--Sobic001G433600 Sobic001G385300 Sobic001G385300 Sobic007G105700--Sobic001G385300 Sobic001G308500 Sobic001G308500 Sobic007G105700--Sobic001G308500 Sobic004G298600 Sobic004G298600 Sobic007G105700--Sobic004G298600 Sobic008G085950 Sobic008G085950 Sobic007G105700--Sobic008G085950 Sobic001G117900 Sobic001G117900 Sobic007G105700--Sobic001G117900 Sobic010G009700--Sobic004G298600 Sobic001G131900 Sobic001G131900 Sobic010G009700--Sobic001G131900 Sobic010G038200 Sobic010G038200 Sobic010G009700--Sobic010G038200 Sobic010G009700--Sobic006G189000 Sobic010G009700--Sobic005G060100 Sobic009G054400 Sobic009G054400 Sobic010G009700--Sobic009G054400 Sobic002G322700 Sobic002G322700 Sobic010G009700--Sobic002G322700 Sobic002G151500 Sobic002G151500 Sobic010G009700--Sobic002G151500 Sobic007G102300 Sobic007G102300 Sobic010G009700--Sobic007G102300 Sobic010G157200 Sobic010G157200 Sobic009G152140--Sobic010G157200 Sobic009G152140--Sobic010G009700 Sobic003G044000 Sobic003G044000 Sobic009G152140--Sobic003G044000 Sobic003G090000 Sobic003G090000 Sobic009G152140--Sobic003G090000 Sobic004G031100 Sobic004G031100 Sobic009G152140--Sobic004G031100 Sobic007G060100 Sobic007G060100 Sobic009G152140--Sobic007G060100 Sobic009G152140--Sobic009G054400 Sobic001G076600 Sobic001G076600 Sobic009G152140--Sobic001G076600 Sobic003G293400 Sobic003G293400 Sobic009G152140--Sobic003G293400 Sobic002G241100 Sobic002G241100 Sobic003G285700--Sobic002G241100 Sobic003G285700--Sobic001G433600 Sobic002G390800 Sobic002G390800 Sobic003G285700--Sobic002G390800 Sobic003G285700--Sobic002G308000 Sobic003G285700--Sobic009G054400 Sobic003G285700--Sobic007G105700 Sobic003G285700--Sobic002G392400 Sobic009G120400 Sobic009G120400 Sobic003G285700--Sobic009G120400 Sobic002G192900 Sobic002G192900 Sobic003G285700--Sobic002G192900 Sobic004G198300 Sobic004G198300 Sobic005G067966--Sobic004G198300 Sobic005G067966--Sobic003G293400 Sobic004G353300 Sobic004G353300 Sobic005G067966--Sobic004G353300 Sobic005G067966--Sobic001G433600 Sobic005G067966--Sobic002G392400 Sobic001G305900 Sobic001G305900 Sobic005G067966--Sobic001G305900 Sobic002G313100 Sobic002G313100 Sobic005G067966--Sobic002G313100 Sobic007G189100 Sobic007G189100 Sobic005G067966--Sobic007G189100 Sobic005G067966--Sobic007G105700 Sobic002G076500 Sobic002G076500 Sobic007G153500--Sobic002G076500 Sobic002G322400 Sobic002G322400 Sobic007G153500--Sobic002G322400 Sobic001G114200 Sobic001G114200 Sobic007G153500--Sobic001G114200 Sobic007G153500--Sobic002G392400 Sobic005G087300 Sobic005G087300 Sobic007G153500--Sobic005G087300 Sobic003G393200 Sobic003G393200 Sobic007G153500--Sobic003G393200 Sobic001G025700 Sobic001G025700 Sobic007G153500--Sobic001G025700 Sobic001G455000 Sobic001G455000 Sobic007G153500--Sobic001G455000 Sobic009G186700 Sobic009G186700 Sobic007G153500--Sobic009G186700 Sobic006G119900--Sobic007G105700 Sobic006G119900--Sobic001G076600 Sobic006G119900--Sobic006G189000 Sobic006G119900--Sobic005G060100 Sobic006G119900--Sobic001G385300 Sobic010G274800 Sobic010G274800 Sobic006G119900--Sobic010G274800 Sobic006G119900--Sobic008G085950 Sobic003G004800 Sobic003G004800 Sobic006G119900--Sobic003G004800 Sobic006G156400 Sobic006G156400 Sobic006G119900--Sobic006G156400 Sobic006G189000--Sobic001G385300 Sobic006G189000--Sobic001G076600 Sobic003G376900 Sobic003G376900 Sobic006G189000--Sobic003G376900 Sobic006G189000--Sobic001G131900 Sobic003G352900 Sobic003G352900 Sobic006G189000--Sobic003G352900 Sobic006G189000--Sobic004G298600 Sobic006G189000--Sobic010G009700 Sobic005G045800 Sobic005G045800 Sobic006G189000--Sobic005G045800 Sobic001G380700 Sobic001G380700 Sobic006G189000--Sobic001G380700 Sobic002G052800 Sobic002G052800 Sobic003G301800--Sobic002G052800 Sobic003G301800--Sobic006G119900 Sobic003G301800--Sobic006G189000 Sobic003G301800--Sobic010G009700 Sobic003G301800--Sobic002G151500 Sobic003G301800--Sobic007G105700 Sobic003G301800--Sobic005G060100 Sobic009G168100 Sobic009G168100 Sobic003G301800--Sobic009G168100 Sobic009G125800 Sobic009G125800 Sobic003G301800--Sobic009G125800
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.