Gene annotation
Transcriptome id Sobic.003G107700.1
Synonym Sb03g009050
Functional annotation expressed protein
UniProt C5XF37
Pfam -
Panther DB PTHR36068 PTHR36068:SF1
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G13100 : -
RAP-DB (Rice) LOC_Os01g01295.1 : expressed protein
MaizeGDB (Corn) Zm00025a023854
Brachypodium KQK02782
Barley HORVU0Hr1G006250.1
Wheat TraesCS3D02G083200 , TraesCS3B02G097900 , TraesCS3A02G082800
Populus -


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cDNA sequences
Sobic.003G107700


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G425150 - -
2 Sobic.003G134400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
3 Sobic.009G140800 DUF647 domain containing protein, putative, expressed -
4 Sobic.004G343500 OsCttP2 - Putative C-terminal processing peptidase homologue, expressed -
5 Sobic.008G047000 actin, putative, expressed K10355: actin, other eukaryote
6 Sobic.004G317500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@pathogenesis-related Bet v I family protein, putative, expressed -
7 Sobic.003G380600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@mitochondrion protein, putative, expressed -
8 Sobic.006G120500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@glycosyl transferase family 17 protein, putative, expressed K00737: beta-1,4-mannosyl-glycoprotein beta-1,4-N-acetylglucosaminyltransferase
9 Sobic.002G077100 hydrolase, NUDIX family, domain containing protein, expressed K07766: diphosphoinositol-polyphosphate diphosphatase
10 Sobic.007G142200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@transferase family protein, putative, expressed K13065: E2.3.1.133, shikimate O-hydroxycinnamoyltransferase
11 Sobic.006G244000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@sulfate transporter, putative, expressed K17471: sulfate transporter 3
12 Sobic.001G446100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
13 Sobic.008G140200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
14 Sobic.009G063100 Mitochondrial substrate carrier family protein(PubMedID : 26465154)@mitochondrial carrier protein, putative, expressed -
15 Sobic.007G033800 basic helix-loop-helix DND-binding domain containing protein, expressed -
16 Sobic.004G353700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
17 Sobic.004G351700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@ZOS2-19 - C2H2 zinc finger protein, expressed -
18 Sobic.008G149000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@anthocyanidin 5,3-O-glucosyltransferase, putative, expressed -
19 Sobic.004G125700 isochorismatase family protein, putative, expressed -
20 Sobic.001G134100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@5-AMP-activated protein kinase-related, putative, expressed -


Gene co-expression network
sample Sobic003G107700 Sobic003G107700 Sobic001G425150 Sobic001G425150 Sobic003G107700--Sobic001G425150 Sobic003G134400 Sobic003G134400 Sobic003G107700--Sobic003G134400 Sobic009G140800 Sobic009G140800 Sobic003G107700--Sobic009G140800 Sobic004G343500 Sobic004G343500 Sobic003G107700--Sobic004G343500 Sobic008G047000 Sobic008G047000 Sobic003G107700--Sobic008G047000 Sobic004G317500 Sobic004G317500 Sobic003G107700--Sobic004G317500 Sobic003G380600 Sobic003G380600 Sobic003G107700--Sobic003G380600 Sobic006G120500 Sobic006G120500 Sobic003G107700--Sobic006G120500 Sobic002G077100 Sobic002G077100 Sobic003G107700--Sobic002G077100 Sobic001G425150--Sobic008G047000 Sobic006G185100 Sobic006G185100 Sobic001G425150--Sobic006G185100 Sobic004G137801 Sobic004G137801 Sobic001G425150--Sobic004G137801 Sobic002G091600 Sobic002G091600 Sobic001G425150--Sobic002G091600 Sobic002G309900 Sobic002G309900 Sobic001G425150--Sobic002G309900 Sobic001G097100 Sobic001G097100 Sobic001G425150--Sobic001G097100 Sobic004G070700 Sobic004G070700 Sobic001G425150--Sobic004G070700 Sobic008G070800 Sobic008G070800 Sobic001G425150--Sobic008G070800 Sobic001G257700 Sobic001G257700 Sobic001G425150--Sobic001G257700 Sobic004G351700 Sobic004G351700 Sobic003G134400--Sobic004G351700 Sobic001G406000 Sobic001G406000 Sobic003G134400--Sobic001G406000 Sobic004G353700 Sobic004G353700 Sobic003G134400--Sobic004G353700 Sobic003G134400--Sobic004G343500 Sobic007G189700 Sobic007G189700 Sobic003G134400--Sobic007G189700 Sobic001G111700 Sobic001G111700 Sobic003G134400--Sobic001G111700 Sobic006G244000 Sobic006G244000 Sobic003G134400--Sobic006G244000 Sobic002G273300 Sobic002G273300 Sobic003G134400--Sobic002G273300 Sobic006G135575 Sobic006G135575 Sobic003G134400--Sobic006G135575 Sobic003G234200 Sobic003G234200 Sobic009G140800--Sobic003G234200 Sobic001G329400 Sobic001G329400 Sobic009G140800--Sobic001G329400 Sobic004G268000 Sobic004G268000 Sobic009G140800--Sobic004G268000 Sobic004G125700 Sobic004G125700 Sobic009G140800--Sobic004G125700 Sobic004G238600 Sobic004G238600 Sobic009G140800--Sobic004G238600 Sobic005G110502 Sobic005G110502 Sobic009G140800--Sobic005G110502 Sobic003G431900 Sobic003G431900 Sobic009G140800--Sobic003G431900 Sobic009G129300 Sobic009G129300 Sobic009G140800--Sobic009G129300 Sobic007G161500 Sobic007G161500 Sobic009G140800--Sobic007G161500 Sobic004G343500--Sobic002G273300 Sobic009G054900 Sobic009G054900 Sobic004G343500--Sobic009G054900 Sobic001G239500 Sobic001G239500 Sobic004G343500--Sobic001G239500 Sobic009G249600 Sobic009G249600 Sobic004G343500--Sobic009G249600 Sobic001G134100 Sobic001G134100 Sobic004G343500--Sobic001G134100 Sobic004G343500--Sobic004G351700 Sobic007G047400 Sobic007G047400 Sobic004G343500--Sobic007G047400 Sobic004G343500--Sobic006G244000 Sobic007G140800 Sobic007G140800 Sobic004G343500--Sobic007G140800 Sobic008G047000--Sobic001G134100 Sobic008G047000--Sobic004G317500 Sobic004G347800 Sobic004G347800 Sobic008G047000--Sobic004G347800 Sobic010G085100 Sobic010G085100 Sobic008G047000--Sobic010G085100 Sobic006G064100 Sobic006G064100 Sobic008G047000--Sobic006G064100 Sobic001G073900 Sobic001G073900 Sobic008G047000--Sobic001G073900 Sobic008G047000--Sobic006G120500 Sobic008G047000--Sobic001G425150 Sobic006G093800 Sobic006G093800 Sobic008G047000--Sobic006G093800 Sobic004G317500--Sobic006G120500 Sobic010G251700 Sobic010G251700 Sobic004G317500--Sobic010G251700 Sobic004G317500--Sobic006G064100 Sobic004G027600 Sobic004G027600 Sobic004G317500--Sobic004G027600 Sobic004G317500--Sobic008G047000 Sobic002G324500 Sobic002G324500 Sobic004G317500--Sobic002G324500 Sobic002G403600 Sobic002G403600 Sobic004G317500--Sobic002G403600 Sobic004G112100 Sobic004G112100 Sobic004G317500--Sobic004G112100 Sobic002G404800 Sobic002G404800 Sobic004G317500--Sobic002G404800 Sobic007G033800 Sobic007G033800 Sobic003G380600--Sobic007G033800 Sobic004G203400 Sobic004G203400 Sobic003G380600--Sobic004G203400 Sobic003G380600--Sobic004G343500 Sobic003G380600--Sobic009G054900 Sobic003G380600--Sobic001G239500 Sobic001G020100 Sobic001G020100 Sobic003G380600--Sobic001G020100 Sobic001G386300 Sobic001G386300 Sobic003G380600--Sobic001G386300 Sobic009G017800 Sobic009G017800 Sobic003G380600--Sobic009G017800 Sobic003G380600--Sobic009G140800 Sobic006G120500--Sobic004G317500 Sobic008G033200 Sobic008G033200 Sobic006G120500--Sobic008G033200 Sobic006G120500--Sobic002G324500 Sobic005G001700 Sobic005G001700 Sobic006G120500--Sobic005G001700 Sobic006G120500--Sobic004G027600 Sobic006G120500--Sobic002G403600 Sobic003G036200 Sobic003G036200 Sobic006G120500--Sobic003G036200 Sobic006G120500--Sobic006G064100 Sobic006G120500--Sobic010G085100 Sobic001G514800 Sobic001G514800 Sobic002G077100--Sobic001G514800 Sobic008G140200 Sobic008G140200 Sobic002G077100--Sobic008G140200 Sobic002G077100--Sobic001G134100 Sobic001G132600 Sobic001G132600 Sobic002G077100--Sobic001G132600 Sobic010G039500 Sobic010G039500 Sobic002G077100--Sobic010G039500 Sobic002G077100--Sobic001G239500 Sobic001G017300 Sobic001G017300 Sobic002G077100--Sobic001G017300 Sobic009G104800 Sobic009G104800 Sobic002G077100--Sobic009G104800 Sobic002G077100--Sobic010G085100
Octagon: transcription factors


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