Gene annotation
Transcriptome id Sobic.003G134400.5,Sobic.003G134400.2,Sobic.003G134400.6,Sobic.003G134400.8,Sobic.003G134400.4,Sobic.003G134400.3,Sobic.003G134400.1,Sobic.003G134400.7
Synonym Sb03g011430
Functional annotation SAG (Senescence-associated gene): differentially expressed gene during developmental senescence. (PubMedID : 27586543)
expressed protein
UniProt C5XHD1 , A0A1B6Q2Y4
Pfam -
Panther DB PTHR33334 PTHR33334:SF4 PTHR33334:SF4 PTHR33334
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G12320 : -
RAP-DB (Rice) LOC_Os01g17396.1 : expressed protein
MaizeGDB (Corn) Zm00025a035185
Brachypodium -
Barley -
Wheat -
Populus -


JBrowse

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cDNA sequences
Sobic.003G134400


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G351700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@ZOS2-19 - C2H2 zinc finger protein, expressed -
2 Sobic.001G406000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@STE_MEKK_ste11_MAP3K.13 - STE kinases include homologs to sterile 7, sterile 11 and sterile 20 from yeast, expressed -
3 Sobic.004G353700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
4 Sobic.004G343500 OsCttP2 - Putative C-terminal processing peptidase homologue, expressed -
5 Sobic.007G189700 - -
6 Sobic.001G111700 alpha/beta-Hydrolases superfamily protein(PubMedID : 26465154)@alpha/beta-Hydrolases superfamily protein(PubMedID : 26465154)@SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@hydrolase, alpha/beta fold family domain containing protein, expressed -
7 Sobic.006G244000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@sulfate transporter, putative, expressed K17471: sulfate transporter 3
8 Sobic.002G273300 B-box (BBX) protein(PubMedID : 30626335)@SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@B-box zinc finger family protein, putative, expressed -
9 Sobic.006G135575 - -
10 Sobic.009G054900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@relA-SpoT like protein RSH4, putative, expressed -
11 Sobic.010G183100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@agenet domain containing protein, putative, expressed -
12 Sobic.007G142200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@transferase family protein, putative, expressed K13065: E2.3.1.133, shikimate O-hydroxycinnamoyltransferase
13 Sobic.010G030800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@zinc finger family protein, putative, expressed -
14 Sobic.009G249600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@transcriptional regulator, putative, expressed K07735: putative transcriptional regulator
15 Sobic.009G222200 E3 ubiquitin ligase, putative, expressed K16276: K16276, zinc finger protein-like protein
16 Sobic.009G140800 DUF647 domain containing protein, putative, expressed -
17 Sobic.002G214300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
18 Sobic.003G380600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@mitochondrion protein, putative, expressed -
19 Sobic.001G329400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@DUF1230 domain containing protein, expressed -
20 Sobic.003G107700 expressed protein -


Gene co-expression network
sample Sobic003G134400 Sobic003G134400 Sobic004G351700 Sobic004G351700 Sobic003G134400--Sobic004G351700 Sobic001G406000 Sobic001G406000 Sobic003G134400--Sobic001G406000 Sobic004G353700 Sobic004G353700 Sobic003G134400--Sobic004G353700 Sobic004G343500 Sobic004G343500 Sobic003G134400--Sobic004G343500 Sobic007G189700 Sobic007G189700 Sobic003G134400--Sobic007G189700 Sobic001G111700 Sobic001G111700 Sobic003G134400--Sobic001G111700 Sobic006G244000 Sobic006G244000 Sobic003G134400--Sobic006G244000 Sobic002G273300 Sobic002G273300 Sobic003G134400--Sobic002G273300 Sobic006G135575 Sobic006G135575 Sobic003G134400--Sobic006G135575 Sobic004G351700--Sobic001G111700 Sobic009G249600 Sobic009G249600 Sobic004G351700--Sobic009G249600 Sobic004G351700--Sobic004G343500 Sobic004G351700--Sobic002G273300 Sobic009G054900 Sobic009G054900 Sobic004G351700--Sobic009G054900 Sobic004G351700--Sobic003G134400 Sobic004G351700--Sobic006G244000 Sobic007G142200 Sobic007G142200 Sobic004G351700--Sobic007G142200 Sobic010G251700 Sobic010G251700 Sobic004G351700--Sobic010G251700 Sobic001G406000--Sobic006G244000 Sobic001G406000--Sobic007G189700 Sobic001G406000--Sobic004G353700 Sobic010G030800 Sobic010G030800 Sobic001G406000--Sobic010G030800 Sobic008G104601 Sobic008G104601 Sobic001G406000--Sobic008G104601 Sobic003G235500 Sobic003G235500 Sobic001G406000--Sobic003G235500 Sobic003G234400 Sobic003G234400 Sobic001G406000--Sobic003G234400 Sobic001G329400 Sobic001G329400 Sobic001G406000--Sobic001G329400 Sobic003G431900 Sobic003G431900 Sobic001G406000--Sobic003G431900 Sobic004G353700--Sobic003G234400 Sobic003G036100 Sobic003G036100 Sobic004G353700--Sobic003G036100 Sobic004G353700--Sobic007G189700 Sobic004G353700--Sobic010G030800 Sobic004G353700--Sobic001G406000 Sobic009G222200 Sobic009G222200 Sobic004G353700--Sobic009G222200 Sobic002G214300 Sobic002G214300 Sobic004G353700--Sobic002G214300 Sobic005G202600 Sobic005G202600 Sobic004G353700--Sobic005G202600 Sobic004G353700--Sobic001G111700 Sobic004G343500--Sobic002G273300 Sobic004G343500--Sobic009G054900 Sobic001G239500 Sobic001G239500 Sobic004G343500--Sobic001G239500 Sobic004G343500--Sobic009G249600 Sobic001G134100 Sobic001G134100 Sobic004G343500--Sobic001G134100 Sobic004G343500--Sobic004G351700 Sobic007G047400 Sobic007G047400 Sobic004G343500--Sobic007G047400 Sobic004G343500--Sobic006G244000 Sobic007G140800 Sobic007G140800 Sobic004G343500--Sobic007G140800 Sobic010G183100 Sobic010G183100 Sobic007G189700--Sobic010G183100 Sobic004G035700 Sobic004G035700 Sobic007G189700--Sobic004G035700 Sobic007G189700--Sobic010G030800 Sobic003G199800 Sobic003G199800 Sobic007G189700--Sobic003G199800 Sobic008G081200 Sobic008G081200 Sobic007G189700--Sobic008G081200 Sobic007G189700--Sobic009G222200 Sobic009G254600 Sobic009G254600 Sobic007G189700--Sobic009G254600 Sobic002G040100 Sobic002G040100 Sobic007G189700--Sobic002G040100 Sobic007G189700--Sobic001G406000 Sobic004G026300 Sobic004G026300 Sobic001G111700--Sobic004G026300 Sobic001G111700--Sobic010G183100 Sobic001G111700--Sobic007G189700 Sobic001G111700--Sobic004G351700 Sobic001G111700--Sobic003G199800 Sobic001G111700--Sobic009G222200 Sobic001G111700--Sobic003G036100 Sobic001G111700--Sobic004G353700 Sobic008G108400 Sobic008G108400 Sobic001G111700--Sobic008G108400 Sobic006G244000--Sobic001G329400 Sobic009G048900 Sobic009G048900 Sobic006G244000--Sobic009G048900 Sobic003G256700 Sobic003G256700 Sobic006G244000--Sobic003G256700 Sobic009G104800 Sobic009G104800 Sobic006G244000--Sobic009G104800 Sobic006G244000--Sobic008G104601 Sobic004G125700 Sobic004G125700 Sobic006G244000--Sobic004G125700 Sobic006G244000--Sobic003G431900 Sobic006G244000--Sobic001G406000 Sobic006G244000--Sobic001G134100 Sobic002G273300--Sobic004G343500 Sobic002G273300--Sobic007G047400 Sobic002G273300--Sobic009G249600 Sobic002G273300--Sobic001G239500 Sobic001G305600 Sobic001G305600 Sobic002G273300--Sobic001G305600 Sobic003G004200 Sobic003G004200 Sobic002G273300--Sobic003G004200 Sobic002G273300--Sobic004G351700 Sobic002G273300--Sobic009G054900 Sobic003G009700 Sobic003G009700 Sobic002G273300--Sobic003G009700 Sobic006G135575--Sobic010G183100 Sobic006G135575--Sobic004G035700 Sobic010G183032 Sobic010G183032 Sobic006G135575--Sobic010G183032 Sobic010G108401 Sobic010G108401 Sobic006G135575--Sobic010G108401 Sobic006G135575--Sobic007G189700 Sobic006G135575--Sobic003G199800 Sobic005G209400 Sobic005G209400 Sobic006G135575--Sobic005G209400 Sobic001G068400 Sobic001G068400 Sobic006G135575--Sobic001G068400 Sobic006G135575--Sobic009G222200
Octagon: transcription factors


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