Gene annotation
Transcriptome id Sobic.003G169966.1
Synonym -
Functional annotation -
UniProt A0A1W0VXM5
Pfam -
Panther DB PTHR13620 PTHR13620:SF9
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) LOC_Os12g20280.1 : expressed protein
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G319600 Relative abundance under control condition and upregulated in cold susceptible sorghum under cold stress(PubMedID : 26645959)@glutathione S-transferase, putative, expressed K00799: GST, glutathione S-transferase
2 Sobic.002G361100 similar to Glutathione transferase(PubMedID : 29862293)@"SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@glutathione S-transferase, putative, expressed K00799: GST, glutathione S-transferase
3 Sobic.007G067600 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@Cupin domain containing protein, expressed -
4 Sobic.001G319700 glutathione S-transferase, putative, expressed K00799: GST, glutathione S-transferase
5 Sobic.007G135201 - -
6 Sobic.010G102300 expressed protein -
7 Sobic.002G261000 expressed protein -
8 Sobic.002G195400 "Cinnamyl alcohol dehydrogenase, expressed in lignifying tissues"(PubMedID : 28606901)@Cinnamyl alcohol dehydrogenase(PubMedID : 19087955)@a cinnamyl alcohol dehydrogenase (CAD)(PubmedID : 26440083)@Protein mannitol dehydrogenase (Os)(PubMedID : 27208977)@dehydrogenase, putative, expressed K00083: cinnamyl-alcohol dehydrogenase
9 Sobic.001G231600 oxidoreductase, short chain dehydrogenase/reductase family domain containing protein, expressed K00059: fabG, 3-oxoacyl-[acyl-carrier protein] reductase
10 Sobic.010G044001 - -
11 Sobic.010G035700 expressed protein -
12 Sobic.001G495164 - -
13 Sobic.005G170150 - -
14 Sobic.003G138300 expressed protein -
15 Sobic.001G317000 glutathione S-transferase, putative, expressed K00799: GST, glutathione S-transferase
16 Sobic.004G216600 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@OsGrx_C2.1 - glutaredoxin subgroup I, expressed K03676: grxC, GLRX, glutaredoxin 3
17 Sobic.009G121300 transporter, monovalent cation:proton antiporter-2 family, putative, expressed -
18 Sobic.003G426100 glutathione S-transferase, putative, expressed K00799: GST, glutathione S-transferase
19 Sobic.001G495148 - -
20 Sobic.005G169100 cytochrome P450, putative, expressed -


Gene co-expression network
sample Sobic003G169966 Sobic003G169966 Sobic001G319600 Sobic001G319600 Sobic003G169966--Sobic001G319600 Sobic002G361100 Sobic002G361100 Sobic003G169966--Sobic002G361100 Sobic007G067600 Sobic007G067600 Sobic003G169966--Sobic007G067600 Sobic001G319700 Sobic001G319700 Sobic003G169966--Sobic001G319700 Sobic007G135201 Sobic007G135201 Sobic003G169966--Sobic007G135201 Sobic010G102300 Sobic010G102300 Sobic003G169966--Sobic010G102300 Sobic002G261000 Sobic002G261000 Sobic003G169966--Sobic002G261000 Sobic002G195400 Sobic002G195400 Sobic003G169966--Sobic002G195400 Sobic001G231600 Sobic001G231600 Sobic003G169966--Sobic001G231600 Sobic004G216600 Sobic004G216600 Sobic001G319600--Sobic004G216600 Sobic001G319600--Sobic002G361100 Sobic001G319600--Sobic007G067600 Sobic010G084700 Sobic010G084700 Sobic001G319600--Sobic010G084700 Sobic006G275200 Sobic006G275200 Sobic001G319600--Sobic006G275200 Sobic009G061200 Sobic009G061200 Sobic001G319600--Sobic009G061200 Sobic001G319600--Sobic002G261000 Sobic006G173900 Sobic006G173900 Sobic001G319600--Sobic006G173900 Sobic001G319600--Sobic001G231600 Sobic002G361100--Sobic009G061200 Sobic002G361100--Sobic001G319600 Sobic001G387900 Sobic001G387900 Sobic002G361100--Sobic001G387900 Sobic003G078100 Sobic003G078100 Sobic002G361100--Sobic003G078100 Sobic009G224100 Sobic009G224100 Sobic002G361100--Sobic009G224100 Sobic004G037000 Sobic004G037000 Sobic002G361100--Sobic004G037000 Sobic010G084600 Sobic010G084600 Sobic002G361100--Sobic010G084600 Sobic001G108200 Sobic001G108200 Sobic002G361100--Sobic001G108200 Sobic002G361100--Sobic004G216600 Sobic007G067600--Sobic002G195400 Sobic007G066932 Sobic007G066932 Sobic007G067600--Sobic007G066932 Sobic007G067600--Sobic001G319700 Sobic007G067600--Sobic010G102300 Sobic005G101800 Sobic005G101800 Sobic007G067600--Sobic005G101800 Sobic010G117900 Sobic010G117900 Sobic007G067600--Sobic010G117900 Sobic003G430600 Sobic003G430600 Sobic007G067600--Sobic003G430600 Sobic003G426000 Sobic003G426000 Sobic007G067600--Sobic003G426000 Sobic001G495164 Sobic001G495164 Sobic007G067600--Sobic001G495164 Sobic001G319700--Sobic010G102300 Sobic001G319700--Sobic002G195400 Sobic001G319700--Sobic007G067600 Sobic003G426100 Sobic003G426100 Sobic001G319700--Sobic003G426100 Sobic001G319700--Sobic007G066932 Sobic010G035700 Sobic010G035700 Sobic001G319700--Sobic010G035700 Sobic007G067350 Sobic007G067350 Sobic001G319700--Sobic007G067350 Sobic001G319700--Sobic003G426000 Sobic004G304300 Sobic004G304300 Sobic001G319700--Sobic004G304300 Sobic007G135201--Sobic003G426100 Sobic007G135201--Sobic001G231600 Sobic007G135201--Sobic007G066932 Sobic007G135201--Sobic007G067600 Sobic007G135201--Sobic002G195400 Sobic007G135201--Sobic007G067350 Sobic007G135201--Sobic010G102300 Sobic007G135201--Sobic010G035700 Sobic006G084600 Sobic006G084600 Sobic007G135201--Sobic006G084600 Sobic010G102300--Sobic001G319700 Sobic010G102300--Sobic002G195400 Sobic010G102300--Sobic010G035700 Sobic010G102300--Sobic007G066932 Sobic010G102300--Sobic003G426100 Sobic010G102300--Sobic007G067600 Sobic010G102300--Sobic007G067350 Sobic010G102300--Sobic004G304300 Sobic010G102300--Sobic001G231600 Sobic001G317000 Sobic001G317000 Sobic002G261000--Sobic001G317000 Sobic002G261000--Sobic006G275200 Sobic001G119400 Sobic001G119400 Sobic002G261000--Sobic001G119400 Sobic002G261000--Sobic004G216600 Sobic009G008900 Sobic009G008900 Sobic002G261000--Sobic009G008900 Sobic001G097600 Sobic001G097600 Sobic002G261000--Sobic001G097600 Sobic002G261000--Sobic001G319600 Sobic003G297600 Sobic003G297600 Sobic002G261000--Sobic003G297600 Sobic001G317200 Sobic001G317200 Sobic002G261000--Sobic001G317200 Sobic002G195400--Sobic007G067600 Sobic002G195400--Sobic001G319700 Sobic002G195400--Sobic003G426100 Sobic002G195400--Sobic007G066932 Sobic002G195400--Sobic010G102300 Sobic002G195400--Sobic003G426000 Sobic002G195400--Sobic007G067350 Sobic002G195400--Sobic001G317000 Sobic002G195400--Sobic004G304300 Sobic001G231600--Sobic007G135201 Sobic001G231600--Sobic007G067600 Sobic001G231600--Sobic001G495164 Sobic001G231600--Sobic006G084600 Sobic001G231600--Sobic007G067350 Sobic001G231600--Sobic010G102300 Sobic001G231600--Sobic002G195400 Sobic004G128400 Sobic004G128400 Sobic001G231600--Sobic004G128400 Sobic004G221500 Sobic004G221500 Sobic001G231600--Sobic004G221500
Octagon: transcription factors


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