Gene annotation
Transcriptome id Sobic.009G121300.1
Synonym Sb09g018910, CHX20, ATCHX20
Functional annotation transporter, monovalent cation:proton antiporter-2 family, putative, expressed
UniProt C5YXD1 , H0I4E7
Pfam PF00999
Panther DB PTHR32468 PTHR32468:SF36
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0016021; integral component of membrane GO:0015299solute:proton antiporter activity GO:0006812cation transport


Orthologs (automatic annotation)
TAIR AT3G53720 : cation/H+ exchanger 20
RAP-DB (Rice) LOC_Os05g31730.1 : transporter, monovalent cation:proton antiporter-2 family, putative, expressed
MaizeGDB (Corn) Zm00025a040913
Brachypodium KQK06510
Barley HORVU1Hr1G057190.1
Wheat TraesCS1A02G239300 , TraesCS1D02G418100 , TraesCS1B02G440400 , TraesCS5B02G031800 , TraesCS1B02G250800 , TraesCS1B02G251500 , TraesCS1D02G239500
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G066601 - -
2 Sobic.006G275200 CHCH domain containing protein, expressed -
3 Sobic.004G280200 tobamovirus multiplication protein, putative, expressed -
4 Sobic.001G309600 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@zinc finger, C3HC4 type, domain containing protein, expressed -
5 Sobic.001G397200 universal stress protein domain containing protein, putative, expressed -
6 Sobic.001G097600 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@"salidroside biosynthesis, ethanol degradation II, phytol degradation"(PubMedID : 21853065)@dehydrogenase, putative, expressed K18857: alcohol dehydrogenase class-P
7 Sobic.009G141800 cytochrome c, putative, expressed K08738: cytochrome c
8 Sobic.008G070350 - K01945: phosphoribosylamine---glycine ligase
9 Sobic.003G138300 expressed protein -
10 Sobic.003G367200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@zinc finger, C3HC4 type domain containing protein, expressed K19040: E3 ubiquitin-protein ligase ATL10/75/76/77/78
11 Sobic.009G035200 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@thioesterase family protein, putative, expressed -
12 Sobic.002G261000 expressed protein -
13 Sobic.002G414600 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@hypoxia-responsive family protein, putative, expressed -
14 Sobic.001G139100 expressed protein -
15 Sobic.010G178500 Expressed in drought and heat(PubMedID : 29862293)@Up-reguralion under heat(PubMedID : 24916767)@Up-reguralion under combine stress of drought and heat(PubMedID : 24916767)@endothelial differentiation-related factor 1, putative, expressed K03627: putative transcription factor
16 Sobic.001G317000 glutathione S-transferase, putative, expressed K00799: GST, glutathione S-transferase
17 Sobic.003G387000 expressed protein -
18 Sobic.003G094200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@alanyl-tRNA synthetase, putative, expressed -
19 Sobic.010G031300 auxin-induced protein 5NG4, putative, expressed -
20 Sobic.009G183400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@glycosyl hydrolases family 17, putative, expressed -


Gene co-expression network
sample Sobic009G121300 Sobic009G121300 Sobic010G066601 Sobic010G066601 Sobic009G121300--Sobic010G066601 Sobic006G275200 Sobic006G275200 Sobic009G121300--Sobic006G275200 Sobic004G280200 Sobic004G280200 Sobic009G121300--Sobic004G280200 Sobic001G309600 Sobic001G309600 Sobic009G121300--Sobic001G309600 Sobic001G397200 Sobic001G397200 Sobic009G121300--Sobic001G397200 Sobic001G097600 Sobic001G097600 Sobic009G121300--Sobic001G097600 Sobic009G141800 Sobic009G141800 Sobic009G121300--Sobic009G141800 Sobic008G070350 Sobic008G070350 Sobic009G121300--Sobic008G070350 Sobic003G138300 Sobic003G138300 Sobic009G121300--Sobic003G138300 Sobic010G066601--Sobic009G141800 Sobic008G030100 Sobic008G030100 Sobic010G066601--Sobic008G030100 Sobic010G178500 Sobic010G178500 Sobic010G066601--Sobic010G178500 Sobic008G136400 Sobic008G136400 Sobic010G066601--Sobic008G136400 Sobic002G104900 Sobic002G104900 Sobic010G066601--Sobic002G104900 Sobic004G321300 Sobic004G321300 Sobic010G066601--Sobic004G321300 Sobic004G189400 Sobic004G189400 Sobic010G066601--Sobic004G189400 Sobic003G387000 Sobic003G387000 Sobic010G066601--Sobic003G387000 Sobic001G107400 Sobic001G107400 Sobic010G066601--Sobic001G107400 Sobic006G275200--Sobic008G136400 Sobic002G393000 Sobic002G393000 Sobic006G275200--Sobic002G393000 Sobic009G008900 Sobic009G008900 Sobic006G275200--Sobic009G008900 Sobic006G173900 Sobic006G173900 Sobic006G275200--Sobic006G173900 Sobic006G275200--Sobic001G097600 Sobic001G119400 Sobic001G119400 Sobic006G275200--Sobic001G119400 Sobic003G367200 Sobic003G367200 Sobic006G275200--Sobic003G367200 Sobic001G317000 Sobic001G317000 Sobic006G275200--Sobic001G317000 Sobic001G038900 Sobic001G038900 Sobic006G275200--Sobic001G038900 Sobic009G169000 Sobic009G169000 Sobic004G280200--Sobic009G169000 Sobic001G405500 Sobic001G405500 Sobic004G280200--Sobic001G405500 Sobic003G369100 Sobic003G369100 Sobic004G280200--Sobic003G369100 Sobic007G026600 Sobic007G026600 Sobic004G280200--Sobic007G026600 Sobic003G086600 Sobic003G086600 Sobic004G280200--Sobic003G086600 Sobic004G280200--Sobic003G367200 Sobic003G144700 Sobic003G144700 Sobic004G280200--Sobic003G144700 Sobic004G280200--Sobic006G275200 Sobic002G261200 Sobic002G261200 Sobic004G280200--Sobic002G261200 Sobic001G309600--Sobic001G397200 Sobic001G481500 Sobic001G481500 Sobic001G309600--Sobic001G481500 Sobic010G032100 Sobic010G032100 Sobic001G309600--Sobic010G032100 Sobic006G032700 Sobic006G032700 Sobic001G309600--Sobic006G032700 Sobic001G149800 Sobic001G149800 Sobic001G309600--Sobic001G149800 Sobic001G309600--Sobic003G138300 Sobic001G309600--Sobic003G086600 Sobic002G215300 Sobic002G215300 Sobic001G309600--Sobic002G215300 Sobic001G481600 Sobic001G481600 Sobic001G309600--Sobic001G481600 Sobic001G397200--Sobic010G032100 Sobic001G397200--Sobic001G309600 Sobic001G397200--Sobic006G032700 Sobic001G397200--Sobic001G481500 Sobic001G397200--Sobic003G086600 Sobic001G397200--Sobic008G070350 Sobic002G068600 Sobic002G068600 Sobic001G397200--Sobic002G068600 Sobic001G397200--Sobic003G367200 Sobic001G397200--Sobic007G026600 Sobic009G183400 Sobic009G183400 Sobic001G097600--Sobic009G183400 Sobic001G097600--Sobic006G275200 Sobic002G414600 Sobic002G414600 Sobic001G097600--Sobic002G414600 Sobic001G097600--Sobic001G317000 Sobic001G097600--Sobic003G367200 Sobic001G097600--Sobic001G038900 Sobic001G097600--Sobic001G119400 Sobic004G216600 Sobic004G216600 Sobic001G097600--Sobic004G216600 Sobic001G097600--Sobic008G136400 Sobic006G267200 Sobic006G267200 Sobic009G141800--Sobic006G267200 Sobic010G086200 Sobic010G086200 Sobic009G141800--Sobic010G086200 Sobic003G393900 Sobic003G393900 Sobic009G141800--Sobic003G393900 Sobic004G065500 Sobic004G065500 Sobic009G141800--Sobic004G065500 Sobic004G187900 Sobic004G187900 Sobic009G141800--Sobic004G187900 Sobic001G281400 Sobic001G281400 Sobic009G141800--Sobic001G281400 Sobic009G141800--Sobic009G008900 Sobic009G141800--Sobic003G387000 Sobic001G459800 Sobic001G459800 Sobic009G141800--Sobic001G459800 Sobic008G070350--Sobic001G397200 Sobic009G035200 Sobic009G035200 Sobic008G070350--Sobic009G035200 Sobic005G051200 Sobic005G051200 Sobic008G070350--Sobic005G051200 Sobic005G103500 Sobic005G103500 Sobic008G070350--Sobic005G103500 Sobic008G070350--Sobic001G309600 Sobic008G070350--Sobic006G032700 Sobic008G070350--Sobic007G026600 Sobic008G070350--Sobic004G280200 Sobic008G070350--Sobic003G086600 Sobic003G138300--Sobic006G032700 Sobic003G138300--Sobic001G309600 Sobic003G138300--Sobic002G215300 Sobic003G138300--Sobic003G367200 Sobic003G138300--Sobic010G032100 Sobic003G138300--Sobic001G397200 Sobic003G138300--Sobic001G481500 Sobic010G031100 Sobic010G031100 Sobic003G138300--Sobic010G031100 Sobic003G138300--Sobic001G149800
Octagon: transcription factors


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