Gene annotation
Transcriptome id Sobic.003G201600.1
Synonym ATHIR1, Sb03g026360, HIR1
Functional annotation SAG (Senescence-associated gene): differentially expressed gene during developmental senescence. (PubMedID : 27586543)
hypersensitive-induced response protein, putative, expressed
UniProt C5XPG9
Pfam PF01145
Panther DB PTHR10264 PTHR10264:SF81
NCBI CDD KOG2620; Prohibitins and stomatins of the PID superfamily
KEGG Orthology -
Gene Ontology GO:0016020; membrane


Orthologs (automatic annotation)
TAIR AT5G62740 : SPFH/Band 7/PHB domain-containing membrane-associated protein family
RAP-DB (Rice) LOC_Os01g40580.1 : hypersensitive-induced response protein, putative, expressed
MaizeGDB (Corn) Zm00025a028527
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G011400 similar to Os01g0225600 protein(PubMedID : 29862293)@late embryogenesis abundant protein, putative, expressed -
2 Sobic.001G200700 expressed protein -
3 Sobic.003G194400 HSF-type DNA-binding domain containing protein, expressed K09419: heat shock transcription factor, other eukaryote
4 Sobic.010G101300 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@dehydrogenase E1 component domain containing protein, expressed K00161: PDHA, pyruvate dehydrogenase E1 component alpha subunit
5 Sobic.005G183200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@14-3-3 protein, putative, expressed K06630: 14-3-3 protein epsilon
6 Sobic.007G156800 "SGL1(Ortholog in rice:Nakagawa et al., 2012)"(PubMedID : 31659907)@expressed protein -
7 Sobic.005G088700 expressed protein -
8 Sobic.003G292400 NADP-dependent malic enzyme(PubMedID : 26186930)@NADP-malic enzyme(PubMedID : 26904072)@Up-reguralion under drought(PubMedID : 24916767)@Up-reguralion under combine stress of drought and heat(PubMedID : 24916767)@C4 carbon fixation(PubMedID : 28620409)@NADP-dependent malic enzyme, putative, expressed K00029: E1.1.1.40, malate dehydrogenase (oxaloacetate-decarboxylating)(NADP+)
9 Sobic.005G064900 cytochrome P450, putative, expressed -
10 Sobic.007G038500 aquaporin protein, putative, expressed K09874: aquaporin NIP
11 Sobic.009G015500 - -
12 Sobic.002G107400 aldehyde oxidase, putative, expressed -
13 Sobic.001G323600 transporter family protein, putative, expressed -
14 Sobic.002G132500 - -
15 Sobic.002G097000 expressed protein -
16 Sobic.010G070750 - -
17 Sobic.001G373600 Sugar transporter(PubMedID : 27330561)@Sugar transporter(PubMedID : 27330561)@nodulin MtN3 family protein, putative, expressed K15382: SLC50A, solute carrier family 50 (sugar transporter)
18 Sobic.004G108800 cytochrome P450, putative, expressed -
19 Sobic.004G101400 Up-reguralion under drought(PubMedID : 24916767)@HSF-type DNA-binding domain containing protein, expressed K09419: heat shock transcription factor, other eukaryote
20 Sobic.009G046200 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence./middle senescence marker (common during developmental, salt-induced, and dark-induced senescence)"(PubMedID : 27586543)@peripheral-type benzodiazepine receptor, putative, expressed -


Gene co-expression network
sample Sobic003G201600 Sobic003G201600 Sobic003G011400 Sobic003G011400 Sobic003G201600--Sobic003G011400 Sobic001G200700 Sobic001G200700 Sobic003G201600--Sobic001G200700 Sobic003G194400 Sobic003G194400 Sobic003G201600--Sobic003G194400 Sobic010G101300 Sobic010G101300 Sobic003G201600--Sobic010G101300 Sobic005G183200 Sobic005G183200 Sobic003G201600--Sobic005G183200 Sobic007G156800 Sobic007G156800 Sobic003G201600--Sobic007G156800 Sobic005G088700 Sobic005G088700 Sobic003G201600--Sobic005G088700 Sobic003G292400 Sobic003G292400 Sobic003G201600--Sobic003G292400 Sobic005G064900 Sobic005G064900 Sobic003G201600--Sobic005G064900 Sobic003G011400--Sobic001G200700 Sobic009G116700 Sobic009G116700 Sobic003G011400--Sobic009G116700 Sobic009G046200 Sobic009G046200 Sobic003G011400--Sobic009G046200 Sobic007G164500 Sobic007G164500 Sobic003G011400--Sobic007G164500 Sobic001G323600 Sobic001G323600 Sobic003G011400--Sobic001G323600 Sobic001G373600 Sobic001G373600 Sobic003G011400--Sobic001G373600 Sobic003G024600 Sobic003G024600 Sobic003G011400--Sobic003G024600 Sobic001G466450 Sobic001G466450 Sobic003G011400--Sobic001G466450 Sobic001G200700--Sobic003G011400 Sobic001G200700--Sobic003G194400 Sobic001G200700--Sobic003G292400 Sobic001G200700--Sobic010G101300 Sobic002G132500 Sobic002G132500 Sobic001G200700--Sobic002G132500 Sobic001G200700--Sobic009G046200 Sobic006G104000 Sobic006G104000 Sobic001G200700--Sobic006G104000 Sobic001G200700--Sobic005G183200 Sobic001G200700--Sobic009G116700 Sobic003G194400--Sobic010G101300 Sobic003G194400--Sobic003G292400 Sobic003G194400--Sobic001G200700 Sobic004G243300 Sobic004G243300 Sobic003G194400--Sobic004G243300 Sobic003G194400--Sobic003G011400 Sobic003G194400--Sobic005G183200 Sobic006G114700 Sobic006G114700 Sobic003G194400--Sobic006G114700 Sobic001G307000 Sobic001G307000 Sobic003G194400--Sobic001G307000 Sobic004G047900 Sobic004G047900 Sobic003G194400--Sobic004G047900 Sobic010G101300--Sobic003G292400 Sobic010G101300--Sobic003G194400 Sobic010G101300--Sobic006G114700 Sobic010G101300--Sobic004G243300 Sobic009G171400 Sobic009G171400 Sobic010G101300--Sobic009G171400 Sobic010G101300--Sobic001G200700 Sobic010G101300--Sobic005G183200 Sobic010G101300--Sobic004G047900 Sobic010G101300--Sobic001G307000 Sobic005G183200--Sobic003G194400 Sobic005G183200--Sobic003G011400 Sobic005G183200--Sobic006G114700 Sobic005G183200--Sobic010G101300 Sobic005G183200--Sobic001G200700 Sobic005G183200--Sobic003G292400 Sobic005G183200--Sobic009G116700 Sobic005G183200--Sobic005G088700 Sobic005G183200--Sobic001G323600 Sobic004G108800 Sobic004G108800 Sobic007G156800--Sobic004G108800 Sobic007G156800--Sobic005G064900 Sobic003G015200 Sobic003G015200 Sobic007G156800--Sobic003G015200 Sobic008G108950 Sobic008G108950 Sobic007G156800--Sobic008G108950 Sobic007G156800--Sobic005G088700 Sobic007G038500 Sobic007G038500 Sobic007G156800--Sobic007G038500 Sobic005G089200 Sobic005G089200 Sobic007G156800--Sobic005G089200 Sobic005G149600 Sobic005G149600 Sobic007G156800--Sobic005G149600 Sobic009G015500 Sobic009G015500 Sobic007G156800--Sobic009G015500 Sobic005G088700--Sobic001G323600 Sobic005G088700--Sobic001G373600 Sobic005G088700--Sobic003G024600 Sobic005G088700--Sobic007G164500 Sobic005G088700--Sobic001G466450 Sobic003G292400--Sobic010G101300 Sobic003G292400--Sobic003G194400 Sobic003G292400--Sobic001G200700 Sobic003G292400--Sobic006G114700 Sobic003G292400--Sobic004G243300 Sobic003G292400--Sobic004G047900 Sobic003G292400--Sobic005G183200 Sobic003G292400--Sobic009G171400 Sobic003G292400--Sobic001G307000 Sobic007G058600 Sobic007G058600 Sobic005G064900--Sobic007G058600 Sobic005G064900--Sobic007G156800 Sobic005G064900--Sobic009G015500 Sobic005G064900--Sobic003G015200 Sobic005G064900--Sobic005G088700 Sobic005G064900--Sobic008G108950 Sobic005G064900--Sobic001G323600 Sobic005G064900--Sobic004G108800 Sobic005G064900--Sobic001G373600
Octagon: transcription factors


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