Gene annotation
Transcriptome id Sobic.003G347680.1
Synonym -
Functional annotation -
UniProt C5XP21
Pfam PF06203
Panther DB PTHR31319 PTHR31319:SF19
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0005515; protein binding


Orthologs (automatic annotation)
TAIR AT5G41380 : CCT motif family protein
RAP-DB (Rice) LOC_Os01g61900.1 : CCT motif family protein, expressed
MaizeGDB (Corn) Zm00025a039709 , Zm00025a026960 , Zm00025a039711
Brachypodium PNT73149 , KQK10466
Barley HORVU3Hr1G087180.5 , HORVU3Hr1G087180.4 , HORVU3Hr1G087180.6 , HORVU3Hr1G087180.1 , HORVU3Hr1G087180.3 , HORVU3Hr1G087180.2
Wheat TraesCS3B02G386800 , TraesCS3A02G354000 , TraesCS3D02G348100
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G123700 UDP-glucoronosyl/UDP-glucosyl transferase, putative, expressed -
2 Sobic.003G028800 Protein of unknown function (DUF1677)(PubMedID : 26465154)@Protein of unknown function (DUF1677)(PubMedID : 26465154)@SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
3 Sobic.006G144800 expressed protein -
4 Sobic.003G083700 DNA binding protein, putative, expressed -
5 Sobic.001G210300 RIPER6 - Ripening-related family protein precursor, expressed -
6 Sobic.002G101800 OsFBX281 - F-box domain containing protein, expressed -
7 Sobic.010G008000 MYB family transcription factor, putative, expressed K09422: transcription factor MYB, plant
8 Sobic.006G197600 RING-H2 finger protein ATL5G, putative, expressed -
9 Sobic.010G261400 expressed protein -
10 Sobic.010G156800 zinc finger, C3HC4 type domain containing protein, expressed -
11 Sobic.008G050100 SAP domain containing protein, expressed -
12 Sobic.003G104900 methyltransferase, putative, expressed K08241: jasmonate O-methyltransferase
13 Sobic.001G303000 zinc finger family protein, putative, expressed -
14 Sobic.004G153700 expressed protein -
15 Sobic.009G204800 senescence-induced receptor-like serine/threonine-protein kinase precursor, putative, expressed -
16 Sobic.010G259200 harpin-induced protein 1 domain containing protein, expressed -
17 Sobic.003G111600 expressed protein -
18 Sobic.002G001300 laccase precursor protein, putative, expressed K05909: laccase
19 Sobic.008G065100 - -
20 Sobic.001G483700 Cupin domain containing protein, expressed -


Gene co-expression network
sample Sobic003G347680 Sobic003G347680 Sobic006G123700 Sobic006G123700 Sobic003G347680--Sobic006G123700 Sobic003G028800 Sobic003G028800 Sobic003G347680--Sobic003G028800 Sobic006G144800 Sobic006G144800 Sobic003G347680--Sobic006G144800 Sobic003G083700 Sobic003G083700 Sobic003G347680--Sobic003G083700 Sobic001G210300 Sobic001G210300 Sobic003G347680--Sobic001G210300 Sobic002G101800 Sobic002G101800 Sobic003G347680--Sobic002G101800 Sobic010G008000 Sobic010G008000 Sobic003G347680--Sobic010G008000 Sobic006G197600 Sobic006G197600 Sobic003G347680--Sobic006G197600 Sobic010G261400 Sobic010G261400 Sobic003G347680--Sobic010G261400 Sobic006G123700--Sobic002G101800 Sobic004G224300 Sobic004G224300 Sobic006G123700--Sobic004G224300 Sobic001G137200 Sobic001G137200 Sobic006G123700--Sobic001G137200 Sobic002G048250 Sobic002G048250 Sobic006G123700--Sobic002G048250 Sobic003G173032 Sobic003G173032 Sobic006G123700--Sobic003G173032 Sobic005G209800 Sobic005G209800 Sobic006G123700--Sobic005G209800 Sobic008G002100 Sobic008G002100 Sobic006G123700--Sobic008G002100 Sobic001G527400 Sobic001G527400 Sobic006G123700--Sobic001G527400 Sobic007G183000 Sobic007G183000 Sobic006G123700--Sobic007G183000 Sobic003G028800--Sobic006G123700 Sobic002G422200 Sobic002G422200 Sobic003G028800--Sobic002G422200 Sobic008G050100 Sobic008G050100 Sobic003G028800--Sobic008G050100 Sobic003G028800--Sobic002G101800 Sobic003G028800--Sobic003G173032 Sobic008G023000 Sobic008G023000 Sobic003G028800--Sobic008G023000 Sobic003G028800--Sobic008G002100 Sobic003G028800--Sobic001G527400 Sobic003G028800--Sobic007G183000 Sobic006G144800--Sobic005G209800 Sobic006G144800--Sobic008G002100 Sobic006G144800--Sobic003G173032 Sobic006G144800--Sobic001G527400 Sobic006G144800--Sobic008G023000 Sobic003G104900 Sobic003G104900 Sobic006G144800--Sobic003G104900 Sobic006G171000 Sobic006G171000 Sobic006G144800--Sobic006G171000 Sobic009G187500 Sobic009G187500 Sobic006G144800--Sobic009G187500 Sobic005G231800 Sobic005G231800 Sobic006G144800--Sobic005G231800 Sobic003G083700--Sobic003G104900 Sobic010G259200 Sobic010G259200 Sobic003G083700--Sobic010G259200 Sobic007G206700 Sobic007G206700 Sobic003G083700--Sobic007G206700 Sobic002G001300 Sobic002G001300 Sobic003G083700--Sobic002G001300 Sobic001G483700 Sobic001G483700 Sobic003G083700--Sobic001G483700 Sobic010G002850 Sobic010G002850 Sobic003G083700--Sobic010G002850 Sobic003G083700--Sobic005G209800 Sobic003G390300 Sobic003G390300 Sobic003G083700--Sobic003G390300 Sobic001G402701 Sobic001G402701 Sobic003G083700--Sobic001G402701 Sobic001G210300--Sobic003G083700 Sobic001G210300--Sobic010G008000 Sobic001G210300--Sobic003G104900 Sobic003G226100 Sobic003G226100 Sobic001G210300--Sobic003G226100 Sobic004G153700 Sobic004G153700 Sobic001G210300--Sobic004G153700 Sobic001G210300--Sobic010G259200 Sobic005G098200 Sobic005G098200 Sobic001G210300--Sobic005G098200 Sobic001G210300--Sobic007G206700 Sobic001G210300--Sobic006G144800 Sobic005G102200 Sobic005G102200 Sobic002G101800--Sobic005G102200 Sobic003G191800 Sobic003G191800 Sobic002G101800--Sobic003G191800 Sobic002G101800--Sobic006G123700 Sobic010G152700 Sobic010G152700 Sobic002G101800--Sobic010G152700 Sobic007G139000 Sobic007G139000 Sobic002G101800--Sobic007G139000 Sobic002G101800--Sobic001G137200 Sobic002G101800--Sobic001G483700 Sobic002G285525 Sobic002G285525 Sobic002G101800--Sobic002G285525 Sobic003G111600 Sobic003G111600 Sobic002G101800--Sobic003G111600 Sobic010G008000--Sobic004G153700 Sobic010G008000--Sobic003G083700 Sobic010G008000--Sobic010G259200 Sobic010G008000--Sobic007G206700 Sobic010G119600 Sobic010G119600 Sobic010G008000--Sobic010G119600 Sobic010G008000--Sobic002G001300 Sobic010G194500 Sobic010G194500 Sobic010G008000--Sobic010G194500 Sobic010G008000--Sobic003G390300 Sobic010G008000--Sobic001G402701 Sobic010G156800 Sobic010G156800 Sobic006G197600--Sobic010G156800 Sobic006G197600--Sobic003G111600 Sobic006G197600--Sobic005G102200 Sobic006G197600--Sobic003G191800 Sobic006G197600--Sobic010G008000 Sobic006G197600--Sobic006G123700 Sobic006G197600--Sobic002G101800 Sobic007G072400 Sobic007G072400 Sobic006G197600--Sobic007G072400 Sobic006G169300 Sobic006G169300 Sobic006G197600--Sobic006G169300 Sobic010G261400--Sobic003G028800 Sobic010G261400--Sobic008G050100 Sobic010G261400--Sobic006G123700 Sobic010G261400--Sobic002G101800 Sobic010G136900 Sobic010G136900 Sobic010G261400--Sobic010G136900 Sobic002G228500 Sobic002G228500 Sobic010G261400--Sobic002G228500 Sobic010G261400--Sobic003G347680 Sobic005G184100 Sobic005G184100 Sobic010G261400--Sobic005G184100 Sobic001G303000 Sobic001G303000 Sobic010G261400--Sobic001G303000
Octagon: transcription factors


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