Gene annotation
Transcriptome id Sobic.001G210300.1
Synonym Sb01g018600
Functional annotation RIPER6 - Ripening-related family protein precursor, expressed
UniProt C5WXF2
Pfam -
Panther DB PTHR33191 PTHR33191:SF5
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) LOC_Os10g34840.1 : RIPER6 - Ripening-related family protein precursor, expressed
MaizeGDB (Corn) Zm00025a006513 , Zm00025a017510
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G083700 DNA binding protein, putative, expressed -
2 Sobic.010G008000 MYB family transcription factor, putative, expressed K09422: transcription factor MYB, plant
3 Sobic.003G104900 methyltransferase, putative, expressed K08241: jasmonate O-methyltransferase
4 Sobic.003G226100 expressed protein -
5 Sobic.004G153700 expressed protein -
6 Sobic.010G259200 harpin-induced protein 1 domain containing protein, expressed -
7 Sobic.005G098200 TKL_IRAK_CR4L.7 - The CR4L subfamily has homology with Crinkly4, expressed -
8 Sobic.007G206700 lectin-like protein kinase, putative, expressed -
9 Sobic.006G144800 expressed protein -
10 Sobic.002G003100 gibberellin 2-beta-dioxygenase 7, putative, expressed K04125: gibberellin 2beta-dioxygenase
11 Sobic.002G001300 laccase precursor protein, putative, expressed K05909: laccase
12 Sobic.010G194500 expansin precursor, putative, expressed -
13 Sobic.010G119600 embryogenesis transmembrane protein, putative, expressed -
14 Sobic.001G402701 - -
15 Sobic.005G209800 nodulin, putative, expressed -
16 Sobic.001G483700 Cupin domain containing protein, expressed -
17 Sobic.003G347680 - -
18 Sobic.003G390300 expressed protein -
19 Sobic.010G002850 - -
20 Sobic.007G015400 a_IG002N01.7, putative, expressed -


Gene co-expression network
sample Sobic001G210300 Sobic001G210300 Sobic003G083700 Sobic003G083700 Sobic001G210300--Sobic003G083700 Sobic010G008000 Sobic010G008000 Sobic001G210300--Sobic010G008000 Sobic003G104900 Sobic003G104900 Sobic001G210300--Sobic003G104900 Sobic003G226100 Sobic003G226100 Sobic001G210300--Sobic003G226100 Sobic004G153700 Sobic004G153700 Sobic001G210300--Sobic004G153700 Sobic010G259200 Sobic010G259200 Sobic001G210300--Sobic010G259200 Sobic005G098200 Sobic005G098200 Sobic001G210300--Sobic005G098200 Sobic007G206700 Sobic007G206700 Sobic001G210300--Sobic007G206700 Sobic006G144800 Sobic006G144800 Sobic001G210300--Sobic006G144800 Sobic003G083700--Sobic003G104900 Sobic003G083700--Sobic010G259200 Sobic003G083700--Sobic007G206700 Sobic002G001300 Sobic002G001300 Sobic003G083700--Sobic002G001300 Sobic001G483700 Sobic001G483700 Sobic003G083700--Sobic001G483700 Sobic010G002850 Sobic010G002850 Sobic003G083700--Sobic010G002850 Sobic005G209800 Sobic005G209800 Sobic003G083700--Sobic005G209800 Sobic003G390300 Sobic003G390300 Sobic003G083700--Sobic003G390300 Sobic001G402701 Sobic001G402701 Sobic003G083700--Sobic001G402701 Sobic010G008000--Sobic004G153700 Sobic010G008000--Sobic003G083700 Sobic010G008000--Sobic010G259200 Sobic010G008000--Sobic007G206700 Sobic010G119600 Sobic010G119600 Sobic010G008000--Sobic010G119600 Sobic010G008000--Sobic002G001300 Sobic010G194500 Sobic010G194500 Sobic010G008000--Sobic010G194500 Sobic010G008000--Sobic003G390300 Sobic010G008000--Sobic001G402701 Sobic003G104900--Sobic005G209800 Sobic003G104900--Sobic001G483700 Sobic008G002100 Sobic008G002100 Sobic003G104900--Sobic008G002100 Sobic008G023000 Sobic008G023000 Sobic003G104900--Sobic008G023000 Sobic001G527400 Sobic001G527400 Sobic003G104900--Sobic001G527400 Sobic007G183000 Sobic007G183000 Sobic003G104900--Sobic007G183000 Sobic005G231800 Sobic005G231800 Sobic003G104900--Sobic005G231800 Sobic004G226300 Sobic004G226300 Sobic003G104900--Sobic004G226300 Sobic006G171000 Sobic006G171000 Sobic003G104900--Sobic006G171000 Sobic003G226100--Sobic004G153700 Sobic009G204800 Sobic009G204800 Sobic003G226100--Sobic009G204800 Sobic003G226100--Sobic010G194500 Sobic003G226100--Sobic010G008000 Sobic003G226100--Sobic003G083700 Sobic003G415500 Sobic003G415500 Sobic003G226100--Sobic003G415500 Sobic005G035000 Sobic005G035000 Sobic003G226100--Sobic005G035000 Sobic003G226100--Sobic007G206700 Sobic001G189500 Sobic001G189500 Sobic003G226100--Sobic001G189500 Sobic004G153700--Sobic003G226100 Sobic004G153700--Sobic010G008000 Sobic004G153700--Sobic010G194500 Sobic004G153700--Sobic009G204800 Sobic004G153700--Sobic003G083700 Sobic006G018900 Sobic006G018900 Sobic004G153700--Sobic006G018900 Sobic004G153700--Sobic007G206700 Sobic007G092300 Sobic007G092300 Sobic004G153700--Sobic007G092300 Sobic004G153700--Sobic010G259200 Sobic010G259200--Sobic007G206700 Sobic010G259200--Sobic002G001300 Sobic010G259200--Sobic010G119600 Sobic010G259200--Sobic003G083700 Sobic010G259200--Sobic001G402701 Sobic010G259200--Sobic003G104900 Sobic010G259200--Sobic003G390300 Sobic010G259200--Sobic010G002850 Sobic010G014300 Sobic010G014300 Sobic010G259200--Sobic010G014300 Sobic005G098200--Sobic003G104900 Sobic005G098200--Sobic001G483700 Sobic005G098200--Sobic005G209800 Sobic005G098200--Sobic005G231800 Sobic005G098200--Sobic008G002100 Sobic003G142900 Sobic003G142900 Sobic005G098200--Sobic003G142900 Sobic005G098200--Sobic008G023000 Sobic005G098200--Sobic004G226300 Sobic005G098200--Sobic001G527400 Sobic007G206700--Sobic010G259200 Sobic007G206700--Sobic002G001300 Sobic007G206700--Sobic003G083700 Sobic007G206700--Sobic010G119600 Sobic007G206700--Sobic001G402701 Sobic007G206700--Sobic003G390300 Sobic007G206700--Sobic003G104900 Sobic010G087200 Sobic010G087200 Sobic007G206700--Sobic010G087200 Sobic001G062700 Sobic001G062700 Sobic007G206700--Sobic001G062700 Sobic006G144800--Sobic005G209800 Sobic006G144800--Sobic008G002100 Sobic003G173032 Sobic003G173032 Sobic006G144800--Sobic003G173032 Sobic006G144800--Sobic001G527400 Sobic006G144800--Sobic008G023000 Sobic006G144800--Sobic003G104900 Sobic006G144800--Sobic006G171000 Sobic009G187500 Sobic009G187500 Sobic006G144800--Sobic009G187500 Sobic006G144800--Sobic005G231800
Octagon: transcription factors


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