Gene annotation
Transcriptome id Sobic.004G047800.1
Synonym Sb04g004090
Functional annotation growth regulator related protein, putative, expressed
UniProt C5XVD5
Pfam PF10250
Panther DB PTHR31933 PTHR31933:SF1
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G26370 : O-fucosyltransferase family protein
RAP-DB (Rice) LOC_Os02g06400.1 : growth regulator related protein, putative, expressed
MaizeGDB (Corn) Zm00025a018224 , Zm00025a019025 , Zm00025a041841
Brachypodium KQJ93419 , KQK17254
Barley HORVU6Hr1G025410.10 , HORVU6Hr1G025410.11 , HORVU6Hr1G025410.8 , HORVU6Hr1G025410.9 , HORVU6Hr1G025410.6 , HORVU6Hr1G025410.4 , HORVU6Hr1G025410.5 , HORVU6Hr1G025410.2 , HORVU6Hr1G025410.3 , HORVU6Hr1G025410.1 , HORVU7Hr1G100930.6 , HORVU7Hr1G100930.7 , HORVU7Hr1G100930.2 , HORVU7Hr1G100930.3 , HORVU7Hr1G100930.1 , HORVU7Hr1G100930.4 , HORVU7Hr1G100930.5 , HORVU7Hr1G100930.8 , HORVU7Hr1G100930.9 , HORVU7Hr1G100930.10 , HORVU7Hr1G100930.11
Wheat TraesCS6A02G132600 , TraesCS6A02G132600 , TraesCS6B02G160700 , TraesCS7D02G433100 , TraesCS7B02G343300 , TraesCS7B02G343300 , TraesCS7A02G444300 , TraesCS7B02G380100 , TraesCS6D02G122300
Populus PNT14780 , PNT14781


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G013600 syntaxin, putative, expressed K08489: syntaxin 16
2 Sobic.001G010500 frigida, putative, expressed -
3 Sobic.003G394900 ZOS1-20 - C2H2 zinc finger protein, expressed -
4 Sobic.002G052800 FAR1 family protein, expressed -
5 Sobic.002G420000 - K03654: ATP-dependent DNA helicase RecQ
6 Sobic.003G005500 B3 DNA binding domain containing protein, expressed -
7 Sobic.002G286632 - -
8 Sobic.010G038200 CDT1A - Putative DNA replication initiation protein, expressed K10727: chromatin licensing and DNA replication factor 1
9 Sobic.001G534466 - -
10 Sobic.003G423800 endonuclease, putative, expressed K08991: crossover junction endonuclease MUS81
11 Sobic.010G237200 DUF292 domain containing protein, expressed -
12 Sobic.008G131900 Candidate orthologue to the genomic region of wheat Hessian fy resistance gene H32(PubMedID : 28624908)@resistance protein LR10, putative, expressed -
13 Sobic.004G298600 histone-lysine N-methyltransferase, putative, expressed K11420: [histone H3]-lysine9 N-trimethyltransferase EHMT
14 Sobic.010G009700 OsFBX182 - F-box domain containing protein, expressed -
15 Sobic.002G309100 phosphate-induced protein 1 conserved region domain containing protein, expressed -
16 Sobic.001G407100 PHD finger family protein, putative, expressed -
17 Sobic.002G173400 expressed protein -
18 Sobic.002G394200 expressed protein K15711: SMARCA3, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A3
19 Sobic.006G189000 ubiquitin-conjugating enzyme, putative, expressed K10577: UBE2I, ubiquitin-conjugating enzyme E2 I
20 Sobic.009G214500 IQ calmodulin-binding motif domain containing protein, expressed -


Gene co-expression network
sample Sobic004G047800 Sobic004G047800 Sobic010G013600 Sobic010G013600 Sobic004G047800--Sobic010G013600 Sobic001G010500 Sobic001G010500 Sobic004G047800--Sobic001G010500 Sobic003G394900 Sobic003G394900 Sobic004G047800--Sobic003G394900 Sobic002G052800 Sobic002G052800 Sobic004G047800--Sobic002G052800 Sobic002G420000 Sobic002G420000 Sobic004G047800--Sobic002G420000 Sobic003G005500 Sobic003G005500 Sobic004G047800--Sobic003G005500 Sobic002G286632 Sobic002G286632 Sobic004G047800--Sobic002G286632 Sobic010G038200 Sobic010G038200 Sobic004G047800--Sobic010G038200 Sobic001G534466 Sobic001G534466 Sobic004G047800--Sobic001G534466 Sobic006G189000 Sobic006G189000 Sobic010G013600--Sobic006G189000 Sobic004G298600 Sobic004G298600 Sobic010G013600--Sobic004G298600 Sobic001G131900 Sobic001G131900 Sobic010G013600--Sobic001G131900 Sobic003G293400 Sobic003G293400 Sobic010G013600--Sobic003G293400 Sobic001G076600 Sobic001G076600 Sobic010G013600--Sobic001G076600 Sobic001G380700 Sobic001G380700 Sobic010G013600--Sobic001G380700 Sobic003G352900 Sobic003G352900 Sobic010G013600--Sobic003G352900 Sobic003G044000 Sobic003G044000 Sobic010G013600--Sobic003G044000 Sobic010G013600--Sobic001G010500 Sobic009G163400 Sobic009G163400 Sobic001G010500--Sobic009G163400 Sobic002G309100 Sobic002G309100 Sobic001G010500--Sobic002G309100 Sobic001G376501 Sobic001G376501 Sobic001G010500--Sobic001G376501 Sobic008G141900 Sobic008G141900 Sobic001G010500--Sobic008G141900 Sobic001G257650 Sobic001G257650 Sobic001G010500--Sobic001G257650 Sobic003G009000 Sobic003G009000 Sobic001G010500--Sobic003G009000 Sobic001G130600 Sobic001G130600 Sobic001G010500--Sobic001G130600 Sobic008G121501 Sobic008G121501 Sobic001G010500--Sobic008G121501 Sobic001G010500--Sobic003G005500 Sobic008G087200 Sobic008G087200 Sobic003G394900--Sobic008G087200 Sobic003G394900--Sobic010G013600 Sobic004G306100 Sobic004G306100 Sobic003G394900--Sobic004G306100 Sobic003G343200 Sobic003G343200 Sobic003G394900--Sobic003G343200 Sobic001G534400 Sobic001G534400 Sobic003G394900--Sobic001G534400 Sobic010G009700 Sobic010G009700 Sobic003G394900--Sobic010G009700 Sobic003G394900--Sobic001G131900 Sobic002G271400 Sobic002G271400 Sobic003G394900--Sobic002G271400 Sobic003G394900--Sobic003G293400 Sobic002G052800--Sobic010G038200 Sobic002G052800--Sobic010G009700 Sobic009G136000 Sobic009G136000 Sobic002G052800--Sobic009G136000 Sobic002G173400 Sobic002G173400 Sobic002G052800--Sobic002G173400 Sobic005G060100 Sobic005G060100 Sobic002G052800--Sobic005G060100 Sobic008G140600 Sobic008G140600 Sobic002G052800--Sobic008G140600 Sobic008G131900 Sobic008G131900 Sobic002G052800--Sobic008G131900 Sobic003G301800 Sobic003G301800 Sobic002G052800--Sobic003G301800 Sobic009G168100 Sobic009G168100 Sobic002G052800--Sobic009G168100 Sobic002G394200 Sobic002G394200 Sobic002G420000--Sobic002G394200 Sobic001G295400 Sobic001G295400 Sobic002G420000--Sobic001G295400 Sobic007G008300 Sobic007G008300 Sobic002G420000--Sobic007G008300 Sobic010G030000 Sobic010G030000 Sobic002G420000--Sobic010G030000 Sobic002G420000--Sobic008G131900 Sobic010G222800 Sobic010G222800 Sobic002G420000--Sobic010G222800 Sobic002G420000--Sobic002G286632 Sobic002G286100 Sobic002G286100 Sobic002G420000--Sobic002G286100 Sobic002G112000 Sobic002G112000 Sobic002G420000--Sobic002G112000 Sobic003G005500--Sobic001G010500 Sobic007G102300 Sobic007G102300 Sobic003G005500--Sobic007G102300 Sobic003G005500--Sobic009G163400 Sobic009G214500 Sobic009G214500 Sobic003G005500--Sobic009G214500 Sobic002G339666 Sobic002G339666 Sobic003G005500--Sobic002G339666 Sobic003G005500--Sobic008G141900 Sobic007G122700 Sobic007G122700 Sobic003G005500--Sobic007G122700 Sobic003G005500--Sobic002G286632 Sobic003G005500--Sobic002G309100 Sobic009G168200 Sobic009G168200 Sobic002G286632--Sobic009G168200 Sobic006G081700 Sobic006G081700 Sobic002G286632--Sobic006G081700 Sobic002G286632--Sobic009G163400 Sobic005G034200 Sobic005G034200 Sobic002G286632--Sobic005G034200 Sobic002G286632--Sobic008G141900 Sobic002G286632--Sobic003G005500 Sobic002G286632--Sobic001G010500 Sobic002G286632--Sobic002G173400 Sobic008G180200 Sobic008G180200 Sobic002G286632--Sobic008G180200 Sobic010G038200--Sobic009G136000 Sobic010G038200--Sobic010G030000 Sobic010G038200--Sobic010G009700 Sobic010G038200--Sobic008G131900 Sobic001G248400 Sobic001G248400 Sobic010G038200--Sobic001G248400 Sobic010G038200--Sobic005G060100 Sobic010G038200--Sobic009G214500 Sobic003G216600 Sobic003G216600 Sobic010G038200--Sobic003G216600 Sobic010G038200--Sobic002G052800 Sobic001G534466--Sobic004G298600 Sobic001G433600 Sobic001G433600 Sobic001G534466--Sobic001G433600 Sobic001G534466--Sobic006G189000 Sobic001G534466--Sobic001G380700 Sobic001G117900 Sobic001G117900 Sobic001G534466--Sobic001G117900 Sobic005G210500 Sobic005G210500 Sobic001G534466--Sobic005G210500 Sobic001G534466--Sobic010G009700 Sobic001G534466--Sobic002G286632 Sobic009G054400 Sobic009G054400 Sobic001G534466--Sobic009G054400
Octagon: transcription factors


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