Gene annotation
Transcriptome id Sobic.010G237200.1
Synonym Sb10g027870
Functional annotation DUF292 domain containing protein, expressed
UniProt A0A194YL42
Pfam PF03398
Panther DB PTHR12161 PTHR12161:SF14
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT4G32350 : Regulator of Vps4 activity in the MVB pathway protein
RAP-DB (Rice) LOC_Os06g47250.1 : DUF292 domain containing protein, expressed
MaizeGDB (Corn) Zm00025a034856 , Zm00025a018192
Brachypodium -
Barley HORVU7Hr1G101130.5 , HORVU7Hr1G101130.6 , HORVU7Hr1G101130.3 , HORVU7Hr1G101130.2 , HORVU6Hr1G025460.3 , HORVU6Hr1G025460.2 , HORVU6Hr1G025460.1 , HORVU6Hr1G025460.4
Wheat TraesCS7B02G345200 , TraesCS7D02G433700
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G384100 ZIP4/SPO22, putative, expressed -
2 Sobic.007G143900 expressed protein -
3 Sobic.004G130980 - -
4 Sobic.007G172900 expressed protein -
5 Sobic.004G047800 growth regulator related protein, putative, expressed -
6 Sobic.001G519100 MYB family transcription factor, putative, expressed -
7 Sobic.003G256400 - -
8 Sobic.003G063500 expressed protein -
9 Sobic.003G399166 - -
10 Sobic.007G097000 Rad21 / Rec8 like protein, putative, expressed K06670: SCC1, MCD1, cohesin complex subunit SCC1
11 Sobic.003G303000 nucleobase-ascorbate transporter, putative, expressed K14611: SLC23A1, solute carrier family 23 (nucleobase transporter), member 1
12 Sobic.003G235900 homeobox associated leucine zipper, putative, expressed K09338: homeobox-leucine zipper protein
13 Sobic.002G427100 TOPBP1B - Similar to DNA replication protein TOPBP1 from, expressed K10728: topoisomerase (DNA) II binding protein 1
14 Sobic.005G163450 - -
15 Sobic.001G540200 PAIR1, putative, expressed -
16 Sobic.004G056100 expressed protein -
17 Sobic.008G096500 plant protein of unknown function domain containing protein, expressed -
18 Sobic.003G394900 ZOS1-20 - C2H2 zinc finger protein, expressed -
19 Sobic.006G234500 OsFBD10 - F-box and FBD domain containing protein, expressed -
20 Sobic.001G511800 expressed protein -


Gene co-expression network
sample Sobic010G237200 Sobic010G237200 Sobic003G384100 Sobic003G384100 Sobic010G237200--Sobic003G384100 Sobic007G143900 Sobic007G143900 Sobic010G237200--Sobic007G143900 Sobic004G130980 Sobic004G130980 Sobic010G237200--Sobic004G130980 Sobic007G172900 Sobic007G172900 Sobic010G237200--Sobic007G172900 Sobic004G047800 Sobic004G047800 Sobic010G237200--Sobic004G047800 Sobic001G519100 Sobic001G519100 Sobic010G237200--Sobic001G519100 Sobic003G256400 Sobic003G256400 Sobic010G237200--Sobic003G256400 Sobic003G063500 Sobic003G063500 Sobic010G237200--Sobic003G063500 Sobic003G399166 Sobic003G399166 Sobic010G237200--Sobic003G399166 Sobic002G074500 Sobic002G074500 Sobic003G384100--Sobic002G074500 Sobic003G384100--Sobic010G237200 Sobic003G384100--Sobic003G063500 Sobic003G384100--Sobic007G143900 Sobic002G239800 Sobic002G239800 Sobic003G384100--Sobic002G239800 Sobic002G095800 Sobic002G095800 Sobic003G384100--Sobic002G095800 Sobic003G384100--Sobic007G172900 Sobic004G041000 Sobic004G041000 Sobic003G384100--Sobic004G041000 Sobic010G046200 Sobic010G046200 Sobic003G384100--Sobic010G046200 Sobic006G115400 Sobic006G115400 Sobic007G143900--Sobic006G115400 Sobic009G066000 Sobic009G066000 Sobic007G143900--Sobic009G066000 Sobic007G143900--Sobic003G384100 Sobic007G139950 Sobic007G139950 Sobic007G143900--Sobic007G139950 Sobic007G220066 Sobic007G220066 Sobic007G143900--Sobic007G220066 Sobic002G105501 Sobic002G105501 Sobic007G143900--Sobic002G105501 Sobic004G056100 Sobic004G056100 Sobic007G143900--Sobic004G056100 Sobic007G143900--Sobic010G046200 Sobic007G143900--Sobic003G399166 Sobic004G130980--Sobic010G046200 Sobic004G130980--Sobic007G172900 Sobic004G130980--Sobic004G056100 Sobic004G130980--Sobic003G256400 Sobic004G130980--Sobic010G237200 Sobic010G183700 Sobic010G183700 Sobic004G130980--Sobic010G183700 Sobic001G386500 Sobic001G386500 Sobic004G130980--Sobic001G386500 Sobic004G130980--Sobic003G384100 Sobic010G222000 Sobic010G222000 Sobic004G130980--Sobic010G222000 Sobic007G172900--Sobic004G056100 Sobic007G172900--Sobic006G115400 Sobic007G172900--Sobic009G066000 Sobic007G172900--Sobic007G139950 Sobic005G008700 Sobic005G008700 Sobic007G172900--Sobic005G008700 Sobic003G331550 Sobic003G331550 Sobic007G172900--Sobic003G331550 Sobic007G172900--Sobic010G046200 Sobic003G162200 Sobic003G162200 Sobic007G172900--Sobic003G162200 Sobic007G172900--Sobic007G220066 Sobic010G013600 Sobic010G013600 Sobic004G047800--Sobic010G013600 Sobic001G010500 Sobic001G010500 Sobic004G047800--Sobic001G010500 Sobic003G394900 Sobic003G394900 Sobic004G047800--Sobic003G394900 Sobic002G052800 Sobic002G052800 Sobic004G047800--Sobic002G052800 Sobic002G420000 Sobic002G420000 Sobic004G047800--Sobic002G420000 Sobic003G005500 Sobic003G005500 Sobic004G047800--Sobic003G005500 Sobic002G286632 Sobic002G286632 Sobic004G047800--Sobic002G286632 Sobic010G038200 Sobic010G038200 Sobic004G047800--Sobic010G038200 Sobic001G534466 Sobic001G534466 Sobic004G047800--Sobic001G534466 Sobic010G213000 Sobic010G213000 Sobic001G519100--Sobic010G213000 Sobic001G499800 Sobic001G499800 Sobic001G519100--Sobic001G499800 Sobic007G097100 Sobic007G097100 Sobic001G519100--Sobic007G097100 Sobic008G112550 Sobic008G112550 Sobic001G519100--Sobic008G112550 Sobic001G061400 Sobic001G061400 Sobic001G519100--Sobic001G061400 Sobic009G026850 Sobic009G026850 Sobic001G519100--Sobic009G026850 Sobic001G320000 Sobic001G320000 Sobic001G519100--Sobic001G320000 Sobic004G142400 Sobic004G142400 Sobic001G519100--Sobic004G142400 Sobic001G166100 Sobic001G166100 Sobic001G519100--Sobic001G166100 Sobic001G005400 Sobic001G005400 Sobic003G256400--Sobic001G005400 Sobic009G096566 Sobic009G096566 Sobic003G256400--Sobic009G096566 Sobic004G349500 Sobic004G349500 Sobic003G256400--Sobic004G349500 Sobic004G351932 Sobic004G351932 Sobic003G256400--Sobic004G351932 Sobic003G256400--Sobic002G105501 Sobic003G256400--Sobic007G220066 Sobic001G522800 Sobic001G522800 Sobic003G256400--Sobic001G522800 Sobic004G051500 Sobic004G051500 Sobic003G256400--Sobic004G051500 Sobic005G151000 Sobic005G151000 Sobic003G256400--Sobic005G151000 Sobic003G063500--Sobic003G384100 Sobic007G125200 Sobic007G125200 Sobic003G063500--Sobic007G125200 Sobic009G170900 Sobic009G170900 Sobic003G063500--Sobic009G170900 Sobic010G252550 Sobic010G252550 Sobic003G063500--Sobic010G252550 Sobic001G220250 Sobic001G220250 Sobic003G063500--Sobic001G220250 Sobic003G386350 Sobic003G386350 Sobic003G063500--Sobic003G386350 Sobic006G082850 Sobic006G082850 Sobic003G063500--Sobic006G082850 Sobic001G001066 Sobic001G001066 Sobic003G063500--Sobic001G001066 Sobic001G149201 Sobic001G149201 Sobic003G063500--Sobic001G149201 Sobic005G163450 Sobic005G163450 Sobic003G399166--Sobic005G163450 Sobic001G307450 Sobic001G307450 Sobic003G399166--Sobic001G307450 Sobic005G156800 Sobic005G156800 Sobic003G399166--Sobic005G156800 Sobic002G380750 Sobic002G380750 Sobic003G399166--Sobic002G380750 Sobic007G120100 Sobic007G120100 Sobic003G399166--Sobic007G120100 Sobic003G063600 Sobic003G063600 Sobic003G399166--Sobic003G063600 Sobic001G452400 Sobic001G452400 Sobic003G399166--Sobic001G452400 Sobic003G291050 Sobic003G291050 Sobic003G399166--Sobic003G291050 Sobic003G303000 Sobic003G303000 Sobic003G399166--Sobic003G303000
Octagon: transcription factors


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