Gene annotation
Transcriptome id Sobic.001G519100.1
Synonym Sb01g048420
Functional annotation MYB family transcription factor, putative, expressed
UniProt A0A1B6QQR0
Pfam PF00249
Panther DB PTHR31314 PTHR31314:SF18
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT2G40260 : Homeodomain-like superfamily protein
RAP-DB (Rice) LOC_Os03g03760.1 : MYB family transcription factor, putative, expressed
MaizeGDB (Corn) Zm00025a000411 , Zm00025a053469
Brachypodium PNT67788
Barley HORVU1Hr1G052170.2 , HORVU1Hr1G052170.3
Wheat TraesCS1D02G205800 , TraesCS1A02G202500 , TraesCS5A02G496100
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G213000 RNA-dependent RNA polymerase, putative, expressed K11699: RDR, RNA-dependent RNA polymerase
2 Sobic.001G499800 expansin precursor, putative, expressed -
3 Sobic.007G097100 aspartic proteinase nepenthesin precursor, putative, expressed -
4 Sobic.008G112550 - -
5 Sobic.001G061400 protein kinase, putative, expressed -
6 Sobic.009G026850 - -
7 Sobic.001G320000 OsSub61 - Putative Subtilisin homologue, expressed -
8 Sobic.004G142400 ATP-binding region, ATPase-like domain containing protein, expressed -
9 Sobic.001G166100 B3 DNA binding domain containing protein, expressed -
10 Sobic.002G265200 formin, putative, expressed -
11 Sobic.010G237200 DUF292 domain containing protein, expressed -
12 Sobic.001G075700 AP2-like ethylene-responsive transcription factor AINTEGUMENTA, putative, expressed K09285: OVM, AP2-like factor, ANT lineage
13 Sobic.006G027900 amidase, putative, expressed K01426: E3.5.1.4, amidase
14 Sobic.001G170301 - -
15 Sobic.004G049600 formin, putative, expressed -
16 Sobic.006G197400 helix-loop-helix DNA-binding protein, putative, expressed -
17 Sobic.003G235900 homeobox associated leucine zipper, putative, expressed K09338: homeobox-leucine zipper protein
18 Sobic.006G276900 expressed protein -
19 Sobic.001G246600 MBTB37 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with Meprin and TRAF Homology MATH domain, expressed K10523: speckle-type POZ protein
20 Sobic.002G175200 A3-BTB2 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with A3 subfamily conserved sequence, expressed K10523: speckle-type POZ protein


Gene co-expression network
sample Sobic001G519100 Sobic001G519100 Sobic010G213000 Sobic010G213000 Sobic001G519100--Sobic010G213000 Sobic001G499800 Sobic001G499800 Sobic001G519100--Sobic001G499800 Sobic007G097100 Sobic007G097100 Sobic001G519100--Sobic007G097100 Sobic008G112550 Sobic008G112550 Sobic001G519100--Sobic008G112550 Sobic001G061400 Sobic001G061400 Sobic001G519100--Sobic001G061400 Sobic009G026850 Sobic009G026850 Sobic001G519100--Sobic009G026850 Sobic001G320000 Sobic001G320000 Sobic001G519100--Sobic001G320000 Sobic004G142400 Sobic004G142400 Sobic001G519100--Sobic004G142400 Sobic001G166100 Sobic001G166100 Sobic001G519100--Sobic001G166100 Sobic006G276900 Sobic006G276900 Sobic010G213000--Sobic006G276900 Sobic010G213000--Sobic001G061400 Sobic010G213000--Sobic001G519100 Sobic007G067900 Sobic007G067900 Sobic010G213000--Sobic007G067900 Sobic010G213000--Sobic007G097100 Sobic002G265200 Sobic002G265200 Sobic010G213000--Sobic002G265200 Sobic001G088400 Sobic001G088400 Sobic010G213000--Sobic001G088400 Sobic001G170301 Sobic001G170301 Sobic010G213000--Sobic001G170301 Sobic001G075700 Sobic001G075700 Sobic010G213000--Sobic001G075700 Sobic001G495550 Sobic001G495550 Sobic001G499800--Sobic001G495550 Sobic001G499800--Sobic008G112550 Sobic003G344950 Sobic003G344950 Sobic001G499800--Sobic003G344950 Sobic001G366600 Sobic001G366600 Sobic001G499800--Sobic001G366600 Sobic001G499800--Sobic001G170301 Sobic001G499800--Sobic001G519100 Sobic001G499800--Sobic001G166100 Sobic010G184400 Sobic010G184400 Sobic001G499800--Sobic010G184400 Sobic009G121150 Sobic009G121150 Sobic001G499800--Sobic009G121150 Sobic006G172000 Sobic006G172000 Sobic007G097100--Sobic006G172000 Sobic007G097100--Sobic001G320000 Sobic001G493100 Sobic001G493100 Sobic007G097100--Sobic001G493100 Sobic007G097100--Sobic004G142400 Sobic007G160400 Sobic007G160400 Sobic007G097100--Sobic007G160400 Sobic006G226000 Sobic006G226000 Sobic007G097100--Sobic006G226000 Sobic003G350400 Sobic003G350400 Sobic007G097100--Sobic003G350400 Sobic006G135800 Sobic006G135800 Sobic007G097100--Sobic006G135800 Sobic006G041700 Sobic006G041700 Sobic007G097100--Sobic006G041700 Sobic001G144900 Sobic001G144900 Sobic008G112550--Sobic001G144900 Sobic008G112550--Sobic009G026850 Sobic005G167650 Sobic005G167650 Sobic008G112550--Sobic005G167650 Sobic001G497700 Sobic001G497700 Sobic008G112550--Sobic001G497700 Sobic009G104600 Sobic009G104600 Sobic008G112550--Sobic009G104600 Sobic008G112550--Sobic001G499800 Sobic002G383500 Sobic002G383500 Sobic008G112550--Sobic002G383500 Sobic003G300250 Sobic003G300250 Sobic008G112550--Sobic003G300250 Sobic006G219950 Sobic006G219950 Sobic008G112550--Sobic006G219950 Sobic001G061400--Sobic010G213000 Sobic001G061400--Sobic001G519100 Sobic001G061400--Sobic006G276900 Sobic001G061400--Sobic007G067900 Sobic010G160500 Sobic010G160500 Sobic001G061400--Sobic010G160500 Sobic001G061400--Sobic002G265200 Sobic009G118500 Sobic009G118500 Sobic001G061400--Sobic009G118500 Sobic004G329600 Sobic004G329600 Sobic001G061400--Sobic004G329600 Sobic001G061400--Sobic006G219950 Sobic010G147966 Sobic010G147966 Sobic009G026850--Sobic010G147966 Sobic004G049600 Sobic004G049600 Sobic009G026850--Sobic004G049600 Sobic002G143300 Sobic002G143300 Sobic009G026850--Sobic002G143300 Sobic009G026850--Sobic002G383500 Sobic009G026850--Sobic008G112550 Sobic009G026850--Sobic005G167650 Sobic009G026850--Sobic001G144900 Sobic009G026850--Sobic001G497700 Sobic010G007800 Sobic010G007800 Sobic009G026850--Sobic010G007800 Sobic001G320000--Sobic007G097100 Sobic001G320000--Sobic007G160400 Sobic001G320000--Sobic001G493100 Sobic010G214800 Sobic010G214800 Sobic001G320000--Sobic010G214800 Sobic009G031800 Sobic009G031800 Sobic001G320000--Sobic009G031800 Sobic001G320000--Sobic006G226000 Sobic002G055800 Sobic002G055800 Sobic001G320000--Sobic002G055800 Sobic001G320000--Sobic006G135800 Sobic001G320000--Sobic004G142400 Sobic004G142400--Sobic007G160400 Sobic006G083900 Sobic006G083900 Sobic004G142400--Sobic006G083900 Sobic005G126701 Sobic005G126701 Sobic004G142400--Sobic005G126701 Sobic003G434300 Sobic003G434300 Sobic004G142400--Sobic003G434300 Sobic008G018100 Sobic008G018100 Sobic004G142400--Sobic008G018100 Sobic010G110100 Sobic010G110100 Sobic004G142400--Sobic010G110100 Sobic006G234433 Sobic006G234433 Sobic004G142400--Sobic006G234433 Sobic007G008500 Sobic007G008500 Sobic004G142400--Sobic007G008500 Sobic004G091600 Sobic004G091600 Sobic004G142400--Sobic004G091600 Sobic001G405200 Sobic001G405200 Sobic001G166100--Sobic001G405200 Sobic002G251050 Sobic002G251050 Sobic001G166100--Sobic002G251050 Sobic003G407950 Sobic003G407950 Sobic001G166100--Sobic003G407950 Sobic010G111450 Sobic010G111450 Sobic001G166100--Sobic010G111450 Sobic002G040201 Sobic002G040201 Sobic001G166100--Sobic002G040201 Sobic001G166100--Sobic009G121150 Sobic006G029250 Sobic006G029250 Sobic001G166100--Sobic006G029250 Sobic009G034250 Sobic009G034250 Sobic001G166100--Sobic009G034250 Sobic006G076100 Sobic006G076100 Sobic001G166100--Sobic006G076100
Octagon: transcription factors


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