Gene annotation
Transcriptome id Sobic.003G235900.1
Synonym ATHB17, ATHB-17, Sb03g029330, HB17
Functional annotation homeobox associated leucine zipper, putative, expressed
UniProt C5XF45
Pfam PF02183 PF00046
Panther DB PTHR24326 PTHR24326:SF114
NCBI CDD KOG0484; Transcription factor PHOX2/ARIX, contains HOX domain
KEGG Orthology K09338; homeobox-leucine zipper protein
Gene Ontology GO:0006355; regulation of transcription, DNA-templated GO:0003700DNA-binding transcription factor activity GO:0003677DNA binding


Orthologs (automatic annotation)
TAIR AT2G01430 : homeobox-leucine zipper protein 17
RAP-DB (Rice) LOC_Os01g45570.1 : homeobox associated leucine zipper, putative, expressed
MaizeGDB (Corn) Zm00025a028268 , Zm00025a003364 , Zm00025a052979
Brachypodium KQK08942 , KQJ83922
Barley -
Wheat TraesCS3A02G231600 , TraesCS3B02G260800 , TraesCS3D02G221800
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G129300 zinc finger, C3HC4 type domain containing protein, expressed -
2 Sobic.007G135700 "Increasing Grain number per panicle, TCP (Teosinte branched/Cycloidea/PCF) transcription factor"(PubMedID : 29483511)@CYC/tb1-like (ClassII) Subclade 19 TCP(PubMedID : 21444336)@"TCP is actually a family of transcription factors named after: teosinte branched 1 (tb1, Zea mays (Maize)), cycloidea (cyc) (Antirrhinum majus) (Garden snapdragon) and PCF in rice (Oryza sativa)."(PubMedID : 27917941)@"plant-specific TCP family of transcription factors, in particular, have been shown to play key roles in evolution of plant form and structure (putative)"(PubMedID : 28383054)@TCP family transcription factor, putative, expressed -
3 Sobic.001G511800 expressed protein -
4 Sobic.003G303000 nucleobase-ascorbate transporter, putative, expressed K14611: SLC23A1, solute carrier family 23 (nucleobase transporter), member 1
5 Sobic.007G188400 expressed protein -
6 Sobic.008G176200 - -
7 Sobic.005G163450 - -
8 Sobic.003G399166 - -
9 Sobic.007G147000 protein binding protein, putative, expressed K11975: E3 ubiquitin-protein ligase RNF144
10 Sobic.002G221000 PHD-finger domain containing protein, putative, expressed -
11 Sobic.007G107200 ankyrin repeat family protein, putative, expressed -
12 Sobic.001G519100 MYB family transcription factor, putative, expressed -
13 Sobic.010G237200 DUF292 domain containing protein, expressed -
14 Sobic.004G338400 "TH1(Ortholog in rice:Li et al., 2012)"(PubMedID : 31659894)@DUF640 domain containing protein, putative, expressed -
15 Sobic.006G281300 - -
16 Sobic.001G534000 kinesin motor domain containing protein, putative, expressed K10406: kinesin family member C2/C3
17 Sobic.003G384100 ZIP4/SPO22, putative, expressed -
18 Sobic.001G307450 - -
19 Sobic.009G247601 - -
20 Sobic.007G115600 protein kinase family protein, putative, expressed -


Gene co-expression network
sample Sobic003G235900 Sobic003G235900 Sobic006G129300 Sobic006G129300 Sobic003G235900--Sobic006G129300 Sobic007G135700 Sobic007G135700 Sobic003G235900--Sobic007G135700 Sobic001G511800 Sobic001G511800 Sobic003G235900--Sobic001G511800 Sobic003G303000 Sobic003G303000 Sobic003G235900--Sobic003G303000 Sobic007G188400 Sobic007G188400 Sobic003G235900--Sobic007G188400 Sobic008G176200 Sobic008G176200 Sobic003G235900--Sobic008G176200 Sobic005G163450 Sobic005G163450 Sobic003G235900--Sobic005G163450 Sobic003G399166 Sobic003G399166 Sobic003G235900--Sobic003G399166 Sobic007G147000 Sobic007G147000 Sobic003G235900--Sobic007G147000 Sobic004G276166 Sobic004G276166 Sobic006G129300--Sobic004G276166 Sobic009G247601 Sobic009G247601 Sobic006G129300--Sobic009G247601 Sobic010G135450 Sobic010G135450 Sobic006G129300--Sobic010G135450 Sobic007G003300 Sobic007G003300 Sobic006G129300--Sobic007G003300 Sobic009G190100 Sobic009G190100 Sobic006G129300--Sobic009G190100 Sobic003G254400 Sobic003G254400 Sobic006G129300--Sobic003G254400 Sobic001G074500 Sobic001G074500 Sobic006G129300--Sobic001G074500 Sobic002G247700 Sobic002G247700 Sobic006G129300--Sobic002G247700 Sobic010G064050 Sobic010G064050 Sobic006G129300--Sobic010G064050 Sobic007G135700--Sobic006G129300 Sobic007G135700--Sobic003G235900 Sobic007G135700--Sobic003G399166 Sobic007G135700--Sobic005G163450 Sobic007G135700--Sobic001G511800 Sobic007G135700--Sobic007G147000 Sobic007G135700--Sobic008G176200 Sobic007G135700--Sobic004G276166 Sobic006G281300 Sobic006G281300 Sobic007G135700--Sobic006G281300 Sobic001G511800--Sobic007G188400 Sobic001G511800--Sobic008G176200 Sobic006G097100 Sobic006G097100 Sobic001G511800--Sobic006G097100 Sobic004G041700 Sobic004G041700 Sobic001G511800--Sobic004G041700 Sobic001G320300 Sobic001G320300 Sobic001G511800--Sobic001G320300 Sobic001G215000 Sobic001G215000 Sobic001G511800--Sobic001G215000 Sobic005G054800 Sobic005G054800 Sobic001G511800--Sobic005G054800 Sobic005G010600 Sobic005G010600 Sobic001G511800--Sobic005G010600 Sobic006G137000 Sobic006G137000 Sobic001G511800--Sobic006G137000 Sobic003G429101 Sobic003G429101 Sobic003G303000--Sobic003G429101 Sobic003G303000--Sobic005G163450 Sobic006G261000 Sobic006G261000 Sobic003G303000--Sobic006G261000 Sobic001G388100 Sobic001G388100 Sobic003G303000--Sobic001G388100 Sobic003G241400 Sobic003G241400 Sobic003G303000--Sobic003G241400 Sobic005G156800 Sobic005G156800 Sobic003G303000--Sobic005G156800 Sobic002G380750 Sobic002G380750 Sobic003G303000--Sobic002G380750 Sobic004G041000 Sobic004G041000 Sobic003G303000--Sobic004G041000 Sobic009G214700 Sobic009G214700 Sobic003G303000--Sobic009G214700 Sobic007G188400--Sobic001G511800 Sobic007G188400--Sobic004G041700 Sobic007G188400--Sobic006G097100 Sobic007G188400--Sobic008G176200 Sobic007G188400--Sobic005G054800 Sobic007G188400--Sobic001G320300 Sobic007G188400--Sobic001G215000 Sobic007G188400--Sobic005G010600 Sobic007G188400--Sobic006G137000 Sobic008G176200--Sobic001G511800 Sobic008G176200--Sobic001G320300 Sobic008G176200--Sobic001G215000 Sobic008G176200--Sobic006G097100 Sobic008G176200--Sobic007G188400 Sobic008G176200--Sobic004G041700 Sobic007G153100 Sobic007G153100 Sobic008G176200--Sobic007G153100 Sobic008G159601 Sobic008G159601 Sobic008G176200--Sobic008G159601 Sobic009G153900 Sobic009G153900 Sobic008G176200--Sobic009G153900 Sobic005G163450--Sobic003G399166 Sobic005G163450--Sobic005G156800 Sobic005G163450--Sobic002G380750 Sobic001G307450 Sobic001G307450 Sobic005G163450--Sobic001G307450 Sobic007G120100 Sobic007G120100 Sobic005G163450--Sobic007G120100 Sobic001G452400 Sobic001G452400 Sobic005G163450--Sobic001G452400 Sobic005G163450--Sobic003G303000 Sobic003G063600 Sobic003G063600 Sobic005G163450--Sobic003G063600 Sobic003G291050 Sobic003G291050 Sobic005G163450--Sobic003G291050 Sobic003G399166--Sobic005G163450 Sobic003G399166--Sobic001G307450 Sobic003G399166--Sobic005G156800 Sobic003G399166--Sobic002G380750 Sobic003G399166--Sobic007G120100 Sobic003G399166--Sobic003G063600 Sobic003G399166--Sobic001G452400 Sobic003G399166--Sobic003G291050 Sobic003G399166--Sobic003G303000 Sobic007G147000--Sobic005G163450 Sobic007G147000--Sobic003G399166 Sobic002G168100 Sobic002G168100 Sobic007G147000--Sobic002G168100 Sobic007G147000--Sobic001G307450 Sobic007G147000--Sobic007G188400 Sobic007G147000--Sobic001G511800 Sobic007G147000--Sobic005G156800 Sobic007G147000--Sobic002G380750 Sobic007G107200 Sobic007G107200 Sobic007G147000--Sobic007G107200
Octagon: transcription factors


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