Gene annotation
Transcriptome id Sobic.001G061400.1
Synonym Sb01g005560
Functional annotation protein kinase, putative, expressed
UniProt A0A1B6QHJ1
Pfam PF07714
Panther DB PTHR27003 PTHR27003:SF50
NCBI CDD KOG1187; Serine/threonine protein kinase
KEGG Orthology -
Gene Ontology GO:0006468; protein phosphorylation GO:0004672protein kinase activity


Orthologs (automatic annotation)
TAIR AT3G03770 : Leucine-rich repeat protein kinase family protein
RAP-DB (Rice) LOC_Os03g57780.1 : protein kinase, putative, expressed
MaizeGDB (Corn) Zm00025a008520 , Zm00025a055878
Brachypodium PNT76977 , PNT76978 , KQK20736 , KQK20737
Barley HORVU5Hr1G104080.13 , HORVU5Hr1G104080.16 , HORVU5Hr1G104080.17 , HORVU5Hr1G104080.14 , HORVU5Hr1G104080.18 , HORVU2Hr1G058900.2 , HORVU5Hr1G104080.8 , HORVU5Hr1G104080.2 , HORVU5Hr1G104080.5 , HORVU5Hr1G104080.6 , HORVU5Hr1G104080.7 , HORVU2Hr1G058900.16 , HORVU2Hr1G058900.17 , HORVU2Hr1G058900.14 , HORVU2Hr1G058900.15 , HORVU2Hr1G058900.12 , HORVU2Hr1G058900.13 , HORVU2Hr1G058900.10 , HORVU2Hr1G058900.11 , HORVU2Hr1G058900.4 , HORVU2Hr1G058900.5 , HORVU2Hr1G058900.6 , HORVU2Hr1G058900.7 , HORVU2Hr1G058900.1 , HORVU2Hr1G058900.3 , HORVU2Hr1G058900.8 , HORVU2Hr1G058900.9 , HORVU5Hr1G104080.22 , HORVU5Hr1G104080.23 , HORVU5Hr1G104080.21 , HORVU5Hr1G104080.20
Wheat TraesCS5A02G428900 , TraesCS5B02G431000 , TraesCS5D02G437000
Populus -


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cDNA sequences
Sobic.001G061400


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G213000 RNA-dependent RNA polymerase, putative, expressed K11699: RDR, RNA-dependent RNA polymerase
2 Sobic.001G519100 MYB family transcription factor, putative, expressed -
3 Sobic.006G276900 expressed protein -
4 Sobic.007G067900 expressed protein -
5 Sobic.010G160500 - K13179: DDX18, ATP-dependent RNA helicase DDX18/HAS1
6 Sobic.002G265200 formin, putative, expressed -
7 Sobic.009G118500 zinc finger protein, putative, expressed -
8 Sobic.004G329600 SMP-30/Gluconolaconase/LRE-like region containing protein, expressed -
9 Sobic.006G219950 - -
10 Sobic.001G246600 MBTB37 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with Meprin and TRAF Homology MATH domain, expressed K10523: speckle-type POZ protein
11 Sobic.002G175200 A3-BTB2 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with A3 subfamily conserved sequence, expressed K10523: speckle-type POZ protein
12 Sobic.004G330200 "TGW6(Ortholog in rice:Ishimaru et al., 2013)"(PubMedID : 31659893)@SMP-30/Gluconolaconase/LRE-like region containing protein, expressed -
13 Sobic.002G356300 expressed protein -
14 Sobic.004G142400 ATP-binding region, ATPase-like domain containing protein, expressed -
15 Sobic.007G097100 aspartic proteinase nepenthesin precursor, putative, expressed -
16 Sobic.006G172000 pectinesterase, putative, expressed -
17 Sobic.002G094400 expressed protein -
18 Sobic.003G107000 receptor-like protein kinase precursor, putative, expressed -
19 Sobic.001G320000 OsSub61 - Putative Subtilisin homologue, expressed -
20 Sobic.002G206100 aspartic proteinase, putative, expressed -


Gene co-expression network
sample Sobic001G061400 Sobic001G061400 Sobic010G213000 Sobic010G213000 Sobic001G061400--Sobic010G213000 Sobic001G519100 Sobic001G519100 Sobic001G061400--Sobic001G519100 Sobic006G276900 Sobic006G276900 Sobic001G061400--Sobic006G276900 Sobic007G067900 Sobic007G067900 Sobic001G061400--Sobic007G067900 Sobic010G160500 Sobic010G160500 Sobic001G061400--Sobic010G160500 Sobic002G265200 Sobic002G265200 Sobic001G061400--Sobic002G265200 Sobic009G118500 Sobic009G118500 Sobic001G061400--Sobic009G118500 Sobic004G329600 Sobic004G329600 Sobic001G061400--Sobic004G329600 Sobic006G219950 Sobic006G219950 Sobic001G061400--Sobic006G219950 Sobic010G213000--Sobic006G276900 Sobic010G213000--Sobic001G061400 Sobic010G213000--Sobic001G519100 Sobic010G213000--Sobic007G067900 Sobic007G097100 Sobic007G097100 Sobic010G213000--Sobic007G097100 Sobic010G213000--Sobic002G265200 Sobic001G088400 Sobic001G088400 Sobic010G213000--Sobic001G088400 Sobic001G170301 Sobic001G170301 Sobic010G213000--Sobic001G170301 Sobic001G075700 Sobic001G075700 Sobic010G213000--Sobic001G075700 Sobic001G519100--Sobic010G213000 Sobic001G499800 Sobic001G499800 Sobic001G519100--Sobic001G499800 Sobic001G519100--Sobic007G097100 Sobic008G112550 Sobic008G112550 Sobic001G519100--Sobic008G112550 Sobic001G519100--Sobic001G061400 Sobic009G026850 Sobic009G026850 Sobic001G519100--Sobic009G026850 Sobic001G320000 Sobic001G320000 Sobic001G519100--Sobic001G320000 Sobic004G142400 Sobic004G142400 Sobic001G519100--Sobic004G142400 Sobic001G166100 Sobic001G166100 Sobic001G519100--Sobic001G166100 Sobic006G140801 Sobic006G140801 Sobic006G276900--Sobic006G140801 Sobic006G276900--Sobic010G213000 Sobic008G190000 Sobic008G190000 Sobic006G276900--Sobic008G190000 Sobic006G050900 Sobic006G050900 Sobic006G276900--Sobic006G050900 Sobic002G206100 Sobic002G206100 Sobic006G276900--Sobic002G206100 Sobic006G276900--Sobic007G067900 Sobic001G160000 Sobic001G160000 Sobic006G276900--Sobic001G160000 Sobic006G276900--Sobic001G075700 Sobic001G381100 Sobic001G381100 Sobic006G276900--Sobic001G381100 Sobic007G067900--Sobic006G276900 Sobic007G067900--Sobic006G140801 Sobic007G067900--Sobic010G213000 Sobic001G135600 Sobic001G135600 Sobic007G067900--Sobic001G135600 Sobic007G067900--Sobic001G088400 Sobic010G206400 Sobic010G206400 Sobic007G067900--Sobic010G206400 Sobic007G067900--Sobic002G206100 Sobic002G113600 Sobic002G113600 Sobic007G067900--Sobic002G113600 Sobic005G164900 Sobic005G164900 Sobic007G067900--Sobic005G164900 Sobic010G160500--Sobic006G219950 Sobic010G160500--Sobic001G061400 Sobic002G356300 Sobic002G356300 Sobic010G160500--Sobic002G356300 Sobic010G195400 Sobic010G195400 Sobic010G160500--Sobic010G195400 Sobic010G160500--Sobic009G118500 Sobic010G160500--Sobic004G329600 Sobic001G164800 Sobic001G164800 Sobic010G160500--Sobic001G164800 Sobic009G152300 Sobic009G152300 Sobic010G160500--Sobic009G152300 Sobic004G091401 Sobic004G091401 Sobic010G160500--Sobic004G091401 Sobic002G265200--Sobic007G097100 Sobic006G016700 Sobic006G016700 Sobic002G265200--Sobic006G016700 Sobic006G197400 Sobic006G197400 Sobic002G265200--Sobic006G197400 Sobic003G350400 Sobic003G350400 Sobic002G265200--Sobic003G350400 Sobic001G112500 Sobic001G112500 Sobic002G265200--Sobic001G112500 Sobic006G255300 Sobic006G255300 Sobic002G265200--Sobic006G255300 Sobic002G256900 Sobic002G256900 Sobic002G265200--Sobic002G256900 Sobic001G068132 Sobic001G068132 Sobic002G265200--Sobic001G068132 Sobic003G086800 Sobic003G086800 Sobic002G265200--Sobic003G086800 Sobic004G312400 Sobic004G312400 Sobic009G118500--Sobic004G312400 Sobic003G107000 Sobic003G107000 Sobic009G118500--Sobic003G107000 Sobic001G315600 Sobic001G315600 Sobic009G118500--Sobic001G315600 Sobic003G032301 Sobic003G032301 Sobic009G118500--Sobic003G032301 Sobic002G317900 Sobic002G317900 Sobic009G118500--Sobic002G317900 Sobic009G118500--Sobic001G061400 Sobic001G221601 Sobic001G221601 Sobic009G118500--Sobic001G221601 Sobic009G118500--Sobic010G160500 Sobic002G054100 Sobic002G054100 Sobic009G118500--Sobic002G054100 Sobic004G329600--Sobic001G164800 Sobic005G054900 Sobic005G054900 Sobic004G329600--Sobic005G054900 Sobic010G256100 Sobic010G256100 Sobic004G329600--Sobic010G256100 Sobic004G000900 Sobic004G000900 Sobic004G329600--Sobic004G000900 Sobic004G349550 Sobic004G349550 Sobic004G329600--Sobic004G349550 Sobic010G110100 Sobic010G110100 Sobic004G329600--Sobic010G110100 Sobic003G061500 Sobic003G061500 Sobic004G329600--Sobic003G061500 Sobic005G184700 Sobic005G184700 Sobic004G329600--Sobic005G184700 Sobic005G184800 Sobic005G184800 Sobic004G329600--Sobic005G184800 Sobic006G219950--Sobic008G112550 Sobic003G333300 Sobic003G333300 Sobic006G219950--Sobic003G333300 Sobic006G219950--Sobic004G329600 Sobic010G111450 Sobic010G111450 Sobic006G219950--Sobic010G111450 Sobic002G251050 Sobic002G251050 Sobic006G219950--Sobic002G251050 Sobic009G121150 Sobic009G121150 Sobic006G219950--Sobic009G121150 Sobic006G219950--Sobic001G166100 Sobic003G344950 Sobic003G344950 Sobic006G219950--Sobic003G344950 Sobic002G040201 Sobic002G040201 Sobic006G219950--Sobic002G040201
Octagon: transcription factors


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