Gene annotation
Transcriptome id Sobic.004G197000.2
Synonym Sb04g024390
Functional annotation glycine-rich cell wall structural protein precursor, putative, expressed
UniProt A0A1Z5RNG7
Pfam PF07172
Panther DB PTHR37389 PTHR37389:SF1
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT2G05540 : Glycine-rich protein family
RAP-DB (Rice) LOC_Os02g37490.1 : glycine-rich cell wall structural protein precursor, putative, expressed
MaizeGDB (Corn) Zm00025a021363
Brachypodium -
Barley -
Wheat -
Populus -


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cDNA sequences
Sobic.004G197000


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G095900 OsSCP60 - Putative Serine Carboxypeptidase homologue, expressed K16296: serine carboxypeptidase-like clade I
2 Sobic.005G138000 zinc knuckle domain containing protein, expressed -
3 Sobic.004G142400 ATP-binding region, ATPase-like domain containing protein, expressed -
4 Sobic.008G018100 histone-lysine N-methyltransferase, H3 lysine-9 specific SUVH1, putative, expressed K11420: [histone H3]-lysine9 N-trimethyltransferase EHMT
5 Sobic.008G165300 Protein kinase domain containing protein, expressed -
6 Sobic.005G167650 - -
7 Sobic.009G104500 small hydrophilic plant seed protein, putative, expressed -
8 Sobic.001G497700 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@Up-reguralion under drought(PubMedID : 24916767)@Up-reguralion under combine stress of drought and heat(PubMedID : 24916767)@late embryogenesis abundant protein D-34, putative, expressed -
9 Sobic.010G007800 Up-reguralion under drought(PubMedID : 24916767)@Up-reguralion under combine stress of drought and heat(PubMedID : 24916767)@late embryogenesis abundant group 1, putative, expressed -
10 Sobic.005G147600 - -
11 Sobic.004G091600 ethylene receptor, putative, expressed K14509: ETR, ethylene receptor
12 Sobic.008G123200 AAA-type ATPase family protein, putative, expressed -
13 Sobic.007G218500 (50.9% identity with SbCCoAOMT/68.5% similarity)(PubMedID : 27457122)@Functions are not investigated(PubMedID : 29721721)@caffeoyl-CoA O-methyltransferase, putative, expressed K18883: tricin synthase
14 Sobic.006G083900 PHD-finger domain containing protein, expressed -
15 Sobic.002G075000 receptor kinase, putative, expressed -
16 Sobic.009G104600 small hydrophilic plant seed protein, putative, expressed -
17 Sobic.003G434300 expressed protein -
18 Sobic.010G256100 LTPL154 - Protease inhibitor/seed storage/LTP family protein precursor, expressed -
19 Sobic.003G061500 small hydrophilic plant seed protein, putative, expressed -
20 Sobic.009G053300 - -


Gene co-expression network
sample Sobic004G197000 Sobic004G197000 Sobic006G095900 Sobic006G095900 Sobic004G197000--Sobic006G095900 Sobic005G138000 Sobic005G138000 Sobic004G197000--Sobic005G138000 Sobic004G142400 Sobic004G142400 Sobic004G197000--Sobic004G142400 Sobic008G018100 Sobic008G018100 Sobic004G197000--Sobic008G018100 Sobic008G165300 Sobic008G165300 Sobic004G197000--Sobic008G165300 Sobic005G167650 Sobic005G167650 Sobic004G197000--Sobic005G167650 Sobic009G104500 Sobic009G104500 Sobic004G197000--Sobic009G104500 Sobic001G497700 Sobic001G497700 Sobic004G197000--Sobic001G497700 Sobic010G007800 Sobic010G007800 Sobic004G197000--Sobic010G007800 Sobic004G349550 Sobic004G349550 Sobic006G095900--Sobic004G349550 Sobic005G184700 Sobic005G184700 Sobic006G095900--Sobic005G184700 Sobic001G165600 Sobic001G165600 Sobic006G095900--Sobic001G165600 Sobic008G149300 Sobic008G149300 Sobic006G095900--Sobic008G149300 Sobic005G184800 Sobic005G184800 Sobic006G095900--Sobic005G184800 Sobic009G246250 Sobic009G246250 Sobic006G095900--Sobic009G246250 Sobic001G122600 Sobic001G122600 Sobic006G095900--Sobic001G122600 Sobic008G123200 Sobic008G123200 Sobic005G138000--Sobic008G123200 Sobic003G434300 Sobic003G434300 Sobic005G138000--Sobic003G434300 Sobic005G138000--Sobic004G142400 Sobic005G126701 Sobic005G126701 Sobic005G138000--Sobic005G126701 Sobic006G083900 Sobic006G083900 Sobic005G138000--Sobic006G083900 Sobic005G138000--Sobic008G018100 Sobic009G053300 Sobic009G053300 Sobic005G138000--Sobic009G053300 Sobic008G165266 Sobic008G165266 Sobic005G138000--Sobic008G165266 Sobic003G350400 Sobic003G350400 Sobic005G138000--Sobic003G350400 Sobic007G160400 Sobic007G160400 Sobic004G142400--Sobic007G160400 Sobic004G142400--Sobic006G083900 Sobic004G142400--Sobic005G126701 Sobic004G142400--Sobic003G434300 Sobic004G142400--Sobic008G018100 Sobic010G110100 Sobic010G110100 Sobic004G142400--Sobic010G110100 Sobic006G234433 Sobic006G234433 Sobic004G142400--Sobic006G234433 Sobic007G008500 Sobic007G008500 Sobic004G142400--Sobic007G008500 Sobic004G091600 Sobic004G091600 Sobic004G142400--Sobic004G091600 Sobic008G018100--Sobic006G083900 Sobic008G018100--Sobic006G234433 Sobic008G018100--Sobic008G149300 Sobic007G025600 Sobic007G025600 Sobic008G018100--Sobic007G025600 Sobic008G018100--Sobic004G349550 Sobic008G018100--Sobic005G126701 Sobic008G018100--Sobic001G122600 Sobic001G125400 Sobic001G125400 Sobic008G165300--Sobic001G125400 Sobic008G165300--Sobic008G018100 Sobic008G165300--Sobic006G083900 Sobic002G127900 Sobic002G127900 Sobic008G165300--Sobic002G127900 Sobic010G179300 Sobic010G179300 Sobic008G165300--Sobic010G179300 Sobic001G393101 Sobic001G393101 Sobic008G165300--Sobic001G393101 Sobic002G266300 Sobic002G266300 Sobic008G165300--Sobic002G266300 Sobic006G217800 Sobic006G217800 Sobic008G165300--Sobic006G217800 Sobic008G165300--Sobic003G434300 Sobic005G167650--Sobic004G091600 Sobic005G167650--Sobic001G497700 Sobic005G167650--Sobic010G007800 Sobic005G167650--Sobic009G104500 Sobic009G104600 Sobic009G104600 Sobic005G167650--Sobic009G104600 Sobic003G061500 Sobic003G061500 Sobic005G167650--Sobic003G061500 Sobic007G218500 Sobic007G218500 Sobic005G167650--Sobic007G218500 Sobic010G256100 Sobic010G256100 Sobic005G167650--Sobic010G256100 Sobic001G144900 Sobic001G144900 Sobic005G167650--Sobic001G144900 Sobic009G104500--Sobic007G218500 Sobic009G104500--Sobic010G007800 Sobic003G144500 Sobic003G144500 Sobic009G104500--Sobic003G144500 Sobic002G401400 Sobic002G401400 Sobic009G104500--Sobic002G401400 Sobic005G165700 Sobic005G165700 Sobic009G104500--Sobic005G165700 Sobic009G104500--Sobic001G497700 Sobic001G126900 Sobic001G126900 Sobic009G104500--Sobic001G126900 Sobic009G104500--Sobic009G104600 Sobic008G159000 Sobic008G159000 Sobic009G104500--Sobic008G159000 Sobic001G497700--Sobic009G104600 Sobic001G497700--Sobic010G007800 Sobic001G497700--Sobic009G104500 Sobic002G185100 Sobic002G185100 Sobic001G497700--Sobic002G185100 Sobic001G497700--Sobic001G144900 Sobic001G497700--Sobic005G167650 Sobic001G497700--Sobic007G218500 Sobic001G497700--Sobic004G091600 Sobic003G130400 Sobic003G130400 Sobic001G497700--Sobic003G130400 Sobic010G007800--Sobic009G104500 Sobic010G007800--Sobic001G497700 Sobic010G007800--Sobic009G104600 Sobic010G007800--Sobic007G218500 Sobic010G007800--Sobic004G091600 Sobic010G007800--Sobic002G185100 Sobic010G007800--Sobic003G144500 Sobic010G007800--Sobic005G167650 Sobic010G007800--Sobic005G165700
Octagon: transcription factors


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