Gene annotation
Transcriptome id Sobic.004G239301.1
Synonym -
Functional annotation -
UniProt A0A1Z5RNZ7
Pfam -
Panther DB PTHR31669 PTHR31669:SF52
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0006355; regulation of transcription, DNA-templated


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) LOC_Os06g42520.1 : transposon protein, putative, unclassified, expressed
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


JBrowse

Open New Page


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.007G130200 - -
2 Sobic.002G099401 - -
3 Sobic.002G144025 - -
4 Sobic.001G310166 - -
5 Sobic.010G221700 - -
6 Sobic.007G104000 Leucine Rich Repeat family protein, expressed -
7 Sobic.007G038432 - -
8 Sobic.003G035332 - -
9 Sobic.003G035332 - -
10 Sobic.003G035332 - -
11 Sobic.005G195700 ribonucleoside-diphosphate reductase small chain, putative, expressed K10808: ribonucleoside-diphosphate reductase subunit M2
12 Sobic.007G173100 - -
13 Sobic.002G173700 expressed protein -
14 Sobic.009G113200 cyclase/dehydrase family protein, expressed -
15 Sobic.009G161350 - -
16 Sobic.004G043400 DNA binding protein, putative, expressed -
17 Sobic.004G131600 plasma membrane ATPase, putative, expressed -
18 Sobic.003G089801 - -
19 Sobic.010G175700 - -
20 Sobic.001G166000 B3 DNA binding domain containing protein, expressed -


Gene co-expression network
sample Sobic004G239301 Sobic004G239301 Sobic007G130200 Sobic007G130200 Sobic004G239301--Sobic007G130200 Sobic002G099401 Sobic002G099401 Sobic004G239301--Sobic002G099401 Sobic002G144025 Sobic002G144025 Sobic004G239301--Sobic002G144025 Sobic001G310166 Sobic001G310166 Sobic004G239301--Sobic001G310166 Sobic010G221700 Sobic010G221700 Sobic004G239301--Sobic010G221700 Sobic007G104000 Sobic007G104000 Sobic004G239301--Sobic007G104000 Sobic007G038432 Sobic007G038432 Sobic004G239301--Sobic007G038432 Sobic003G035332 Sobic003G035332 Sobic004G239301--Sobic003G035332 Sobic010G173201 Sobic010G173201 Sobic007G130200--Sobic010G173201 Sobic001G271100 Sobic001G271100 Sobic007G130200--Sobic001G271100 Sobic010G164350 Sobic010G164350 Sobic007G130200--Sobic010G164350 Sobic010G120700 Sobic010G120700 Sobic007G130200--Sobic010G120700 Sobic010G119500 Sobic010G119500 Sobic007G130200--Sobic010G119500 Sobic008G055366 Sobic008G055366 Sobic007G130200--Sobic008G055366 Sobic008G055432 Sobic008G055432 Sobic007G130200--Sobic008G055432 Sobic007G226600 Sobic007G226600 Sobic007G130200--Sobic007G226600 Sobic010G068200 Sobic010G068200 Sobic007G130200--Sobic010G068200 Sobic002G099401--Sobic003G035332 Sobic002G099401--Sobic001G310166 Sobic002G099401--Sobic010G221700 Sobic009G113200 Sobic009G113200 Sobic002G099401--Sobic009G113200 Sobic002G099401--Sobic007G104000 Sobic004G043400 Sobic004G043400 Sobic002G099401--Sobic004G043400 Sobic002G099401--Sobic007G038432 Sobic008G167100 Sobic008G167100 Sobic002G144025--Sobic008G167100 Sobic007G104300 Sobic007G104300 Sobic002G144025--Sobic007G104300 Sobic002G023400 Sobic002G023400 Sobic002G144025--Sobic002G023400 Sobic006G268700 Sobic006G268700 Sobic002G144025--Sobic006G268700 Sobic001G181900 Sobic001G181900 Sobic002G144025--Sobic001G181900 Sobic010G160100 Sobic010G160100 Sobic002G144025--Sobic010G160100 Sobic008G049000 Sobic008G049000 Sobic002G144025--Sobic008G049000 Sobic004G166301 Sobic004G166301 Sobic002G144025--Sobic004G166301 Sobic002G047100 Sobic002G047100 Sobic002G144025--Sobic002G047100 Sobic001G310166--Sobic002G099401 Sobic001G310166--Sobic003G035332 Sobic001G310166--Sobic010G221700 Sobic001G310166--Sobic009G113200 Sobic001G310166--Sobic007G104000 Sobic001G310166--Sobic007G038432 Sobic005G195700 Sobic005G195700 Sobic001G310166--Sobic005G195700 Sobic010G221700--Sobic002G099401 Sobic010G221700--Sobic001G310166 Sobic010G221700--Sobic003G035332 Sobic010G221700--Sobic005G195700 Sobic010G221700--Sobic004G043400 Sobic010G221700--Sobic009G113200 Sobic010G175700 Sobic010G175700 Sobic010G221700--Sobic010G175700 Sobic007G104000--Sobic003G035332 Sobic007G104000--Sobic002G099401 Sobic007G104000--Sobic007G038432 Sobic007G104000--Sobic001G310166 Sobic007G104000--Sobic009G113200 Sobic007G104000--Sobic010G221700 Sobic007G104000--Sobic004G043400 Sobic007G038432--Sobic003G035332 Sobic007G038432--Sobic002G099401 Sobic007G038432--Sobic005G195700 Sobic007G038432--Sobic007G104000 Sobic007G038432--Sobic010G221700 Sobic007G038432--Sobic004G043400 Sobic007G038432--Sobic001G310166 Sobic003G035332--Sobic003G035332 Sobic003G035332--Sobic002G099401 Sobic003G035332--Sobic001G310166 Sobic003G035332--Sobic009G113200 Sobic003G035332--Sobic010G221700 Sobic003G035332--Sobic007G104000 Sobic003G035332--Sobic004G043400 Sobic003G035332--Sobic007G038432
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.