Gene annotation
Transcriptome id Sobic.004G242300.1
Synonym Sb04g028310
Functional annotation expressed protein
UniProt A0A194YRH1
Pfam PF14009
Panther DB PTHR33413 PTHR33413:SF2
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G60010 : -
RAP-DB (Rice) LOC_Os02g50810.1 : expressed protein
MaizeGDB (Corn) Zm00025a021997 , Zm00025a033221 , Zm00025a049427 , Zm00025a042632
Brachypodium KQK18812 , KQK01976 , KQK01975 , PNT69654
Barley HORVU5Hr1G059690.1 , HORVU5Hr1G059690.2 , HORVU5Hr1G059690.3 , HORVU5Hr1G059690.4 , HORVU5Hr1G059690.5 , HORVU5Hr1G059690.6 , HORVU5Hr1G059690.7 , HORVU5Hr1G059690.8 , HORVU7Hr1G039360.8 , HORVU7Hr1G039360.9 , HORVU7Hr1G039360.5 , HORVU7Hr1G039360.6 , HORVU7Hr1G039360.7 , HORVU7Hr1G039390.1 , HORVU6Hr1G076380.8 , HORVU6Hr1G076380.6 , HORVU6Hr1G076380.7 , HORVU6Hr1G076380.4 , HORVU6Hr1G076380.2 , HORVU6Hr1G076380.3 , HORVU7Hr1G039360.10 , HORVU6Hr1G076380.1
Wheat TraesCS7D02G194000 , TraesCS7D02G194000 , TraesCS7A02G192700 , TraesCS6A02G309500 , TraesCS6B02G339300 , TraesCS6D02G288900 , TraesCS7B02G098100
Populus -


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cDNA sequences
Sobic.004G242300


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G300500 Trihelix Family(PubMedID : 24864043)@"SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@expressed protein -
2 Sobic.001G429100 eukaryotic translation initiation factor, putative, expressed K03259: translation initiation factor 4E
3 Sobic.003G230300 expressed protein -
4 Sobic.004G320300 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@expressed protein -
5 Sobic.007G013500 expressed protein -
6 Sobic.001G396300 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@Protein CP12-2 (Os)(PubMedID : 27208977)@calvin cycle protein CP12, putative, expressed -
7 Sobic.009G154000 ATOFP18/OFP18, putative, expressed -
8 Sobic.006G195200 purine permease, putative, expressed -
9 Sobic.006G162700 - -
10 Sobic.K044200 - -
11 Sobic.004G330400 expressed protein -
12 Sobic.008G028500 expressed protein -
13 Sobic.006G157300 expressed protein -
14 Sobic.001G362800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein K06940: uncharacterized protein
15 Sobic.008G139900 expressed protein -
16 Sobic.006G247500 terpene synthase, putative, expressed -
17 Sobic.004G192700 dynein light chain type 1 family protein, putative, expressed K10418: dynein light chain LC8-type
18 Sobic.010G224800 patellin-5, putative, expressed -
19 Sobic.005G022600 PME/invertase inhibitor, putative, expressed -
20 Sobic.002G284800 expressed protein -


Gene co-expression network
sample Sobic004G242300 Sobic004G242300 Sobic004G300500 Sobic004G300500 Sobic004G242300--Sobic004G300500 Sobic001G429100 Sobic001G429100 Sobic004G242300--Sobic001G429100 Sobic003G230300 Sobic003G230300 Sobic004G242300--Sobic003G230300 Sobic004G320300 Sobic004G320300 Sobic004G242300--Sobic004G320300 Sobic007G013500 Sobic007G013500 Sobic004G242300--Sobic007G013500 Sobic001G396300 Sobic001G396300 Sobic004G242300--Sobic001G396300 Sobic009G154000 Sobic009G154000 Sobic004G242300--Sobic009G154000 Sobic006G195200 Sobic006G195200 Sobic004G242300--Sobic006G195200 Sobic006G162700 Sobic006G162700 Sobic004G242300--Sobic006G162700 Sobic004G300500--Sobic003G230300 Sobic001G362800 Sobic001G362800 Sobic004G300500--Sobic001G362800 Sobic006G053000 Sobic006G053000 Sobic004G300500--Sobic006G053000 Sobic010G189800 Sobic010G189800 Sobic004G300500--Sobic010G189800 Sobic001G295900 Sobic001G295900 Sobic004G300500--Sobic001G295900 Sobic004G236500 Sobic004G236500 Sobic004G300500--Sobic004G236500 Sobic004G300500--Sobic001G429100 Sobic010G073300 Sobic010G073300 Sobic004G300500--Sobic010G073300 Sobic001G180300 Sobic001G180300 Sobic004G300500--Sobic001G180300 Sobic002G276700 Sobic002G276700 Sobic001G429100--Sobic002G276700 Sobic004G192700 Sobic004G192700 Sobic001G429100--Sobic004G192700 Sobic002G056300 Sobic002G056300 Sobic001G429100--Sobic002G056300 Sobic001G441800 Sobic001G441800 Sobic001G429100--Sobic001G441800 Sobic003G350100 Sobic003G350100 Sobic001G429100--Sobic003G350100 Sobic001G200500 Sobic001G200500 Sobic001G429100--Sobic001G200500 Sobic004G227000 Sobic004G227000 Sobic001G429100--Sobic004G227000 Sobic008G133100 Sobic008G133100 Sobic001G429100--Sobic008G133100 Sobic004G265400 Sobic004G265400 Sobic001G429100--Sobic004G265400 Sobic001G407000 Sobic001G407000 Sobic003G230300--Sobic001G407000 Sobic003G230300--Sobic006G053000 Sobic008G020300 Sobic008G020300 Sobic003G230300--Sobic008G020300 Sobic003G105300 Sobic003G105300 Sobic003G230300--Sobic003G105300 Sobic006G257500 Sobic006G257500 Sobic003G230300--Sobic006G257500 Sobic001G541900 Sobic001G541900 Sobic003G230300--Sobic001G541900 Sobic001G255700 Sobic001G255700 Sobic003G230300--Sobic001G255700 Sobic007G116600 Sobic007G116600 Sobic003G230300--Sobic007G116600 Sobic006G058300 Sobic006G058300 Sobic003G230300--Sobic006G058300 Sobic004G320300--Sobic001G200500 Sobic009G031100 Sobic009G031100 Sobic004G320300--Sobic009G031100 Sobic002G156300 Sobic002G156300 Sobic004G320300--Sobic002G156300 Sobic003G109400 Sobic003G109400 Sobic004G320300--Sobic003G109400 Sobic007G001300 Sobic007G001300 Sobic004G320300--Sobic007G001300 Sobic010G224800 Sobic010G224800 Sobic004G320300--Sobic010G224800 Sobic010G114400 Sobic010G114400 Sobic004G320300--Sobic010G114400 Sobic003G201400 Sobic003G201400 Sobic004G320300--Sobic003G201400 Sobic002G206200 Sobic002G206200 Sobic004G320300--Sobic002G206200 Sobic003G179100 Sobic003G179100 Sobic007G013500--Sobic003G179100 Sobic001G115800 Sobic001G115800 Sobic007G013500--Sobic001G115800 Sobic007G013500--Sobic010G073300 Sobic009G255300 Sobic009G255300 Sobic007G013500--Sobic009G255300 Sobic006G278500 Sobic006G278500 Sobic007G013500--Sobic006G278500 Sobic007G013500--Sobic004G192700 Sobic006G139600 Sobic006G139600 Sobic007G013500--Sobic006G139600 Sobic001G519300 Sobic001G519300 Sobic007G013500--Sobic001G519300 Sobic004G275500 Sobic004G275500 Sobic007G013500--Sobic004G275500 Sobic001G396300--Sobic004G320300 Sobic001G186925 Sobic001G186925 Sobic001G396300--Sobic001G186925 Sobic006G065700 Sobic006G065700 Sobic001G396300--Sobic006G065700 Sobic001G396300--Sobic001G441800 Sobic002G387100 Sobic002G387100 Sobic001G396300--Sobic002G387100 Sobic002G430200 Sobic002G430200 Sobic001G396300--Sobic002G430200 Sobic001G004000 Sobic001G004000 Sobic001G396300--Sobic001G004000 Sobic001G525000 Sobic001G525000 Sobic001G396300--Sobic001G525000 Sobic009G198400 Sobic009G198400 Sobic001G396300--Sobic009G198400 SobicK044200 SobicK044200 Sobic009G154000--SobicK044200 Sobic002G425900 Sobic002G425900 Sobic009G154000--Sobic002G425900 Sobic004G128600 Sobic004G128600 Sobic009G154000--Sobic004G128600 Sobic009G154000--Sobic010G114400 Sobic004G330400 Sobic004G330400 Sobic009G154000--Sobic004G330400 Sobic009G154000--Sobic010G224800 Sobic002G284800 Sobic002G284800 Sobic009G154000--Sobic002G284800 Sobic009G154000--Sobic001G255700 Sobic003G368150 Sobic003G368150 Sobic009G154000--Sobic003G368150 Sobic007G131900 Sobic007G131900 Sobic006G195200--Sobic007G131900 Sobic006G195200--Sobic004G320300 Sobic002G092700 Sobic002G092700 Sobic006G195200--Sobic002G092700 Sobic006G195200--Sobic001G396300 Sobic006G195200--Sobic006G065700 Sobic006G195200--Sobic009G198400 Sobic010G170600 Sobic010G170600 Sobic006G195200--Sobic010G170600 Sobic001G213400 Sobic001G213400 Sobic006G195200--Sobic001G213400 Sobic006G195200--Sobic002G387100 Sobic006G162700--Sobic004G330400 Sobic010G114500 Sobic010G114500 Sobic006G162700--Sobic010G114500 Sobic008G028500 Sobic008G028500 Sobic006G162700--Sobic008G028500 Sobic006G162700--Sobic009G031100 Sobic006G162700--Sobic010G224800 Sobic006G162700--Sobic003G105300 Sobic006G162700--Sobic007G001300 Sobic006G162700--Sobic002G284800 Sobic006G162700--Sobic003G109400
Octagon: transcription factors


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