Gene annotation
Transcriptome id Sobic.004G248200.1
Synonym Sb04g028800
Functional annotation SAG (Senescence-associated gene): differentially expressed gene during developmental senescence. (PubMedID : 27586543)
expressed protein
UniProt A0A1Z5RPY3
Pfam PF07893
Panther DB PTHR33085 PTHR33085:SF3
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) LOC_Os07g49050.1 : expressed protein
MaizeGDB (Corn) -
Brachypodium PNT73773
Barley -
Wheat -
Populus -


JBrowse

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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G242800 - -
2 Sobic.003G410000 expressed protein -
3 Sobic.002G257150 - -
4 Sobic.001G329001 - K03129: transcription initiation factor TFIID subunit 4
5 Sobic.009G175800 B3 DNA binding domain containing protein, expressed -
6 Sobic.002G086700 - -
7 Sobic.002G262850 - -
8 Sobic.002G076300 - -
9 Sobic.004G206600 osFTL5 FT-Like5 homologous to Flowering Locus T gene@ contains Pfam profile PF01161: Phosphatidylethanolamine-binding protein, expressed K16223: protein FLOWERING LOCUS T
10 Sobic.008G187500 bZIP transcription factor domain containing protein, expressed -
11 Sobic.002G012100 cytokinin inducible protein, putative, expressed -
12 Sobic.001G441900 oxidoreductase, putative, expressed -
13 Sobic.003G338600 - -
14 Sobic.006G268900 "STKc_IRAK, catalytic domain of the serine/threonine kinases"(PubMedID : 29491869)@expressed protein -
15 Sobic.008G104400 ZOS12-05 - C2H2 zinc finger protein, expressed K09506: DnaJ homolog subfamily A member 5
16 Sobic.004G058400 RNA binding protein, putative, expressed -
17 Sobic.004G250400 aluminum-activated malate transporter, putative, expressed -
18 Sobic.010G133450 - -
19 Sobic.010G100700 HEAT repeat family protein, putative, expressed -
20 Sobic.004G093700 tetraspanin family protein, putative, expressed -


Gene co-expression network
sample Sobic004G248200 Sobic004G248200 Sobic004G242800 Sobic004G242800 Sobic004G248200--Sobic004G242800 Sobic003G410000 Sobic003G410000 Sobic004G248200--Sobic003G410000 Sobic002G257150 Sobic002G257150 Sobic004G248200--Sobic002G257150 Sobic001G329001 Sobic001G329001 Sobic004G248200--Sobic001G329001 Sobic009G175800 Sobic009G175800 Sobic004G248200--Sobic009G175800 Sobic002G086700 Sobic002G086700 Sobic004G248200--Sobic002G086700 Sobic002G262850 Sobic002G262850 Sobic004G248200--Sobic002G262850 Sobic002G076300 Sobic002G076300 Sobic004G248200--Sobic002G076300 Sobic004G206600 Sobic004G206600 Sobic004G248200--Sobic004G206600 Sobic001G167000 Sobic001G167000 Sobic004G242800--Sobic001G167000 Sobic002G012100 Sobic002G012100 Sobic004G242800--Sobic002G012100 Sobic004G242800--Sobic004G206600 Sobic010G196466 Sobic010G196466 Sobic004G242800--Sobic010G196466 Sobic004G242800--Sobic009G175800 Sobic001G270800 Sobic001G270800 Sobic004G242800--Sobic001G270800 Sobic003G330350 Sobic003G330350 Sobic004G242800--Sobic003G330350 Sobic009G102250 Sobic009G102250 Sobic004G242800--Sobic009G102250 Sobic009G087540 Sobic009G087540 Sobic004G242800--Sobic009G087540 Sobic003G410000--Sobic001G329001 Sobic004G058400 Sobic004G058400 Sobic003G410000--Sobic004G058400 Sobic006G134300 Sobic006G134300 Sobic003G410000--Sobic006G134300 Sobic010G133450 Sobic010G133450 Sobic003G410000--Sobic010G133450 Sobic010G129100 Sobic010G129100 Sobic003G410000--Sobic010G129100 Sobic001G492400 Sobic001G492400 Sobic003G410000--Sobic001G492400 Sobic003G410000--Sobic002G086700 Sobic008G177100 Sobic008G177100 Sobic003G410000--Sobic008G177100 Sobic004G250400 Sobic004G250400 Sobic003G410000--Sobic004G250400 Sobic002G257150--Sobic001G329001 Sobic005G132100 Sobic005G132100 Sobic002G257150--Sobic005G132100 Sobic002G257150--Sobic003G410000 Sobic002G257150--Sobic004G248200 Sobic002G257150--Sobic004G058400 Sobic002G257150--Sobic004G242800 Sobic002G257150--Sobic002G076300 Sobic002G257150--Sobic004G206600 Sobic002G257150--Sobic002G086700 Sobic001G329001--Sobic003G410000 Sobic001G329001--Sobic004G058400 Sobic001G329001--Sobic002G086700 Sobic001G329001--Sobic002G257150 Sobic001G329001--Sobic002G076300 Sobic001G329001--Sobic008G177100 Sobic010G195000 Sobic010G195000 Sobic001G329001--Sobic010G195000 Sobic003G347560 Sobic003G347560 Sobic001G329001--Sobic003G347560 Sobic001G329001--Sobic006G134300 Sobic009G230600 Sobic009G230600 Sobic009G175800--Sobic009G230600 Sobic009G175800--Sobic004G242800 Sobic002G287600 Sobic002G287600 Sobic009G175800--Sobic002G287600 Sobic008G072800 Sobic008G072800 Sobic009G175800--Sobic008G072800 Sobic004G299850 Sobic004G299850 Sobic009G175800--Sobic004G299850 Sobic009G175800--Sobic002G012100 Sobic009G175800--Sobic001G167000 Sobic004G342200 Sobic004G342200 Sobic009G175800--Sobic004G342200 Sobic006G268900 Sobic006G268900 Sobic009G175800--Sobic006G268900 Sobic004G358150 Sobic004G358150 Sobic002G086700--Sobic004G358150 Sobic002G086700--Sobic001G329001 Sobic002G086700--Sobic003G410000 Sobic002G086700--Sobic002G076300 Sobic002G244901 Sobic002G244901 Sobic002G086700--Sobic002G244901 Sobic002G086700--Sobic003G347560 Sobic001G498033 Sobic001G498033 Sobic002G086700--Sobic001G498033 Sobic006G151100 Sobic006G151100 Sobic002G086700--Sobic006G151100 Sobic003G375800 Sobic003G375800 Sobic002G086700--Sobic003G375800 Sobic009G088300 Sobic009G088300 Sobic002G262850--Sobic009G088300 Sobic002G262850--Sobic001G492400 Sobic007G183600 Sobic007G183600 Sobic002G262850--Sobic007G183600 Sobic001G424650 Sobic001G424650 Sobic002G262850--Sobic001G424650 Sobic002G262850--Sobic008G177100 Sobic002G262850--Sobic004G250400 Sobic003G063400 Sobic003G063400 Sobic002G262850--Sobic003G063400 Sobic003G263900 Sobic003G263900 Sobic002G262850--Sobic003G263900 Sobic002G187900 Sobic002G187900 Sobic002G262850--Sobic002G187900 Sobic002G076300--Sobic001G498033 Sobic002G076300--Sobic001G329001 Sobic002G076300--Sobic002G086700 Sobic002G076300--Sobic010G195000 Sobic010G054700 Sobic010G054700 Sobic002G076300--Sobic010G054700 Sobic002G377501 Sobic002G377501 Sobic002G076300--Sobic002G377501 Sobic002G076300--Sobic004G242800 Sobic004G347000 Sobic004G347000 Sobic002G076300--Sobic004G347000 Sobic009G235400 Sobic009G235400 Sobic002G076300--Sobic009G235400 Sobic004G206600--Sobic010G196466 Sobic003G267200 Sobic003G267200 Sobic004G206600--Sobic003G267200 Sobic004G206600--Sobic002G012100 Sobic004G206600--Sobic004G242800 Sobic004G206600--Sobic001G167000 Sobic007G141900 Sobic007G141900 Sobic004G206600--Sobic007G141900 Sobic002G324801 Sobic002G324801 Sobic004G206600--Sobic002G324801 Sobic004G206600--Sobic009G087540 Sobic009G236900 Sobic009G236900 Sobic004G206600--Sobic009G236900
Octagon: transcription factors


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