Gene annotation
Transcriptome id Sobic.004G273500.1
Synonym Sb04g031080, ATOPT4, OPT4
Functional annotation oligopeptide transporter, putative, expressed
UniProt C5Y0G4
Pfam PF03169
Panther DB PTHR22601 PTHR22601:SF11
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G64410 : oligopeptide transporter 4
RAP-DB (Rice) LOC_Os01g43940.1 : oligopeptide transporter, putative, expressed
MaizeGDB (Corn) Zm00025a032394 , Zm00025a021633 , Zm00025a032387 , Zm00025a032386 , Zm00025a032388
Brachypodium KQJ84335 , KQK00862
Barley HORVU0Hr1G025700.1 , HORVU0Hr1G025700.2 , HORVU0Hr1G025700.3 , HORVU2Hr1G102890.2 , HORVU2Hr1G102890.1 , HORVU6Hr1G067430.12 , HORVU6Hr1G067430.13 , HORVU6Hr1G067430.14 , HORVU6Hr1G067430.15 , HORVU6Hr1G067430.16 , HORVU6Hr1G067430.17 , HORVU6Hr1G067430.18 , HORVU6Hr1G067430.19 , HORVU6Hr1G067430.2 , HORVU6Hr1G067430.3 , HORVU6Hr1G067430.6 , HORVU6Hr1G067430.7 , HORVU6Hr1G067430.21 , HORVU6Hr1G067430.20
Wheat TraesCS5D02G400800 , TraesCS2A02G562100 , TraesCS6B02G293200 , TraesCS6B02G293100 , TraesCS6D02G248800 , TraesCS7D02G099500 , TraesCS5A02G391000 , TraesCS6D02G248700 , TraesCS2B02G624600 , TraesCS5B02G395800 , TraesCS6A02G265800 , TraesCS6A02G265900 , TraesCS7A02G105300
Populus -


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cDNA sequences
Sobic.004G273500


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G217001 - -
2 Sobic.001G093732 - -
3 Sobic.002G018133 - -
4 Sobic.004G288900 protein kinase, putative, expressed -
5 Sobic.001G312801 - -
6 Sobic.009G252600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@mitochondrial chaperone BCS1, putative, expressed K08900: mitochondrial chaperone BCS1
7 Sobic.006G154900 mitochondrial carrier protein, putative, expressed -
8 Sobic.007G017300 endoglucanase, putative, expressed -
9 Sobic.002G231400 - -
10 Sobic.007G213500 expressed protein -
11 Sobic.002G395900 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@nodulation protein-related, putative, expressed -
12 Sobic.003G241600 - -
13 Sobic.001G368000 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@annexin, putative, expressed -
14 Sobic.009G252500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@mitochondrial chaperone BCS1, putative, expressed K08900: mitochondrial chaperone BCS1
15 Sobic.007G081400 - -
16 Sobic.001G018550 - -
17 Sobic.009G184500 cysteine proteinase inhibitor precursor protein, putative, expressed -
18 Sobic.004G026000 ankyrin repeat domain-containing protein, chloroplast precursor, putative, expressed -
19 Sobic.006G243000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@CCB4, putative, expressed -
20 Sobic.002G138200 domain of unknown function DUF966 domain containing protein, expressed -


Gene co-expression network
sample Sobic004G273500 Sobic004G273500 Sobic010G217001 Sobic010G217001 Sobic004G273500--Sobic010G217001 Sobic001G093732 Sobic001G093732 Sobic004G273500--Sobic001G093732 Sobic002G018133 Sobic002G018133 Sobic004G273500--Sobic002G018133 Sobic004G288900 Sobic004G288900 Sobic004G273500--Sobic004G288900 Sobic001G312801 Sobic001G312801 Sobic004G273500--Sobic001G312801 Sobic009G252600 Sobic009G252600 Sobic004G273500--Sobic009G252600 Sobic006G154900 Sobic006G154900 Sobic004G273500--Sobic006G154900 Sobic007G017300 Sobic007G017300 Sobic004G273500--Sobic007G017300 Sobic002G231400 Sobic002G231400 Sobic004G273500--Sobic002G231400 Sobic010G217001--Sobic002G018133 Sobic007G081400 Sobic007G081400 Sobic010G217001--Sobic007G081400 Sobic010G217001--Sobic002G231400 Sobic002G030001 Sobic002G030001 Sobic010G217001--Sobic002G030001 Sobic005G083866 Sobic005G083866 Sobic010G217001--Sobic005G083866 Sobic010G217001--Sobic004G288900 Sobic003G043650 Sobic003G043650 Sobic010G217001--Sobic003G043650 Sobic002G138200 Sobic002G138200 Sobic010G217001--Sobic002G138200 Sobic001G316500 Sobic001G316500 Sobic010G217001--Sobic001G316500 Sobic001G093732--Sobic009G252600 Sobic010G201444 Sobic010G201444 Sobic001G093732--Sobic010G201444 Sobic003G251900 Sobic003G251900 Sobic001G093732--Sobic003G251900 Sobic005G014400 Sobic005G014400 Sobic001G093732--Sobic005G014400 Sobic008G007200 Sobic008G007200 Sobic001G093732--Sobic008G007200 Sobic001G483001 Sobic001G483001 Sobic001G093732--Sobic001G483001 Sobic007G046600 Sobic007G046600 Sobic001G093732--Sobic007G046600 Sobic001G093732--Sobic006G154900 Sobic006G279100 Sobic006G279100 Sobic001G093732--Sobic006G279100 Sobic002G018133--Sobic010G217001 Sobic003G155350 Sobic003G155350 Sobic002G018133--Sobic003G155350 Sobic002G018133--Sobic005G083866 Sobic004G184500 Sobic004G184500 Sobic002G018133--Sobic004G184500 Sobic005G094500 Sobic005G094500 Sobic002G018133--Sobic005G094500 Sobic002G018133--Sobic002G138200 Sobic001G468200 Sobic001G468200 Sobic002G018133--Sobic001G468200 Sobic002G018133--Sobic004G288900 Sobic008G166250 Sobic008G166250 Sobic002G018133--Sobic008G166250 Sobic004G288900--Sobic001G312801 Sobic004G288900--Sobic002G138200 Sobic004G288900--Sobic003G043650 Sobic009G184500 Sobic009G184500 Sobic004G288900--Sobic009G184500 Sobic010G041500 Sobic010G041500 Sobic004G288900--Sobic010G041500 Sobic008G096300 Sobic008G096300 Sobic004G288900--Sobic008G096300 Sobic001G490600 Sobic001G490600 Sobic004G288900--Sobic001G490600 Sobic009G170301 Sobic009G170301 Sobic004G288900--Sobic009G170301 Sobic003G241600 Sobic003G241600 Sobic004G288900--Sobic003G241600 Sobic001G312801--Sobic004G288900 Sobic001G312801--Sobic001G490600 Sobic001G368000 Sobic001G368000 Sobic001G312801--Sobic001G368000 Sobic001G312801--Sobic009G184500 Sobic004G190800 Sobic004G190800 Sobic001G312801--Sobic004G190800 Sobic001G312801--Sobic007G017300 Sobic001G312801--Sobic009G170301 Sobic001G312801--Sobic008G096300 Sobic001G312801--Sobic002G138200 Sobic009G252600--Sobic003G251900 Sobic003G155800 Sobic003G155800 Sobic009G252600--Sobic003G155800 Sobic009G252600--Sobic001G093732 Sobic002G206900 Sobic002G206900 Sobic009G252600--Sobic002G206900 Sobic001G520000 Sobic001G520000 Sobic009G252600--Sobic001G520000 Sobic009G252600--Sobic001G483001 Sobic003G253700 Sobic003G253700 Sobic009G252600--Sobic003G253700 Sobic010G261500 Sobic010G261500 Sobic009G252600--Sobic010G261500 Sobic006G157450 Sobic006G157450 Sobic009G252600--Sobic006G157450 Sobic006G154900--Sobic008G007200 Sobic006G154900--Sobic002G018133 Sobic006G154900--Sobic001G093732 Sobic006G154900--Sobic010G217001 Sobic008G078500 Sobic008G078500 Sobic006G154900--Sobic008G078500 Sobic006G154900--Sobic009G184500 Sobic002G360701 Sobic002G360701 Sobic006G154900--Sobic002G360701 Sobic006G154900--Sobic004G273500 Sobic006G154900--Sobic010G201444 Sobic007G017300--Sobic001G368000 Sobic001G483200 Sobic001G483200 Sobic007G017300--Sobic001G483200 Sobic009G004500 Sobic009G004500 Sobic007G017300--Sobic009G004500 Sobic005G155001 Sobic005G155001 Sobic007G017300--Sobic005G155001 Sobic007G061500 Sobic007G061500 Sobic007G017300--Sobic007G061500 Sobic003G093500 Sobic003G093500 Sobic007G017300--Sobic003G093500 Sobic007G213500 Sobic007G213500 Sobic007G017300--Sobic007G213500 Sobic001G028500 Sobic001G028500 Sobic007G017300--Sobic001G028500 Sobic007G017300--Sobic001G468200 Sobic001G018550 Sobic001G018550 Sobic002G231400--Sobic001G018550 Sobic002G231400--Sobic003G241600 Sobic003G429600 Sobic003G429600 Sobic002G231400--Sobic003G429600 Sobic005G096201 Sobic005G096201 Sobic002G231400--Sobic005G096201 Sobic004G200000 Sobic004G200000 Sobic002G231400--Sobic004G200000 Sobic002G231400--Sobic003G043650 Sobic002G209450 Sobic002G209450 Sobic002G231400--Sobic002G209450 Sobic002G231400--Sobic010G217001 Sobic003G305250 Sobic003G305250 Sobic002G231400--Sobic003G305250
Octagon: transcription factors


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