Gene annotation
Transcriptome id Sobic.004G333600.1
Synonym GUS3, AtGUS3, Sb04g036200
Functional annotation heparanase-like protein precursor, putative, expressed
UniProt C5XV25
Pfam PF03662
Panther DB PTHR14363 PTHR14363:SF16
NCBI CDD -
KEGG Orthology K07964; heparanase
Gene Ontology GO:0016798; hydrolase activity, acting on glycosyl bonds GO:0016020membrane


Orthologs (automatic annotation)
TAIR AT5G34940 : glucuronidase 3
RAP-DB (Rice) LOC_Os02g55870.1 : heparanase-like protein precursor, putative, expressed
MaizeGDB (Corn) Zm00025a022504 , Zm00025a042871
Brachypodium KQK19345 , PNT69373 , KQK01193
Barley HORVU6Hr1G087000.11 , HORVU6Hr1G087000.10 , HORVU6Hr1G087000.13 , HORVU6Hr1G087000.12 , HORVU6Hr1G087000.9 , HORVU6Hr1G087000.8 , HORVU6Hr1G087000.5 , HORVU6Hr1G087000.4 , HORVU6Hr1G087000.7 , HORVU6Hr1G087000.6 , HORVU6Hr1G087000.1 , HORVU6Hr1G087000.3 , HORVU6Hr1G087000.2
Wheat TraesCS6A02G367300 , TraesCS6A02G367300 , TraesCS6B02G402600 , TraesCS7D02G123400 , TraesCS7B02G025300 , TraesCS6D02G350300 , TraesCS7A02G141400
Populus -


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cDNA sequences
Sobic.004G333600


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G308100 uncharacterized Cys-rich domain containing protein, putative, expressed -
2 Sobic.010G181500 3-ketoacyl-CoA synthase, putative, expressed K15397: 3-ketoacyl-CoA synthase
3 Sobic.009G088700 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@cellulase, putative, expressed -
4 Sobic.001G487200 zinc finger, C3HC4 type domain containing protein, expressed K19045: E3 ubiquitin-protein ligase BIG BROTHER and related proteins
5 Sobic.003G419700 classical arabinogalactan protein 26 precursor, putative, expressed -
6 Sobic.002G179150 - -
7 Sobic.006G218600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@OsFBK15 - F-box domain and kelch repeat containing protein, expressed -
8 Sobic.001G113800 receptor protein kinase TMK1 precursor, putative, expressed -
9 Sobic.001G083500 plastocyanin-like domain containing protein, putative, expressed -
10 Sobic.002G372200 hydrolase protein, putative, expressed -
11 Sobic.004G246500 ATMAP70 protein, putative, expressed -
12 Sobic.009G064900 serine/threonine protein phosphatase 2A 59 kDa regulatory subunit Bgamma isoform, putative, expressed K11584: serine/threonine-protein phosphatase 2A regulatory subunit B'
13 Sobic.007G166800 domain of unknown function DUF966 domain containing protein, expressed -
14 Sobic.005G098600 - -
15 Sobic.009G248900 expressed protein -
16 Sobic.001G074000 receptor protein kinase CLAVATA1 precursor, putative, expressed -
17 Sobic.010G010900 expressed protein -
18 Sobic.003G100700 serine/threonine-protein kinase, putative, expressed -
19 Sobic.007G214700 fasciclin domain containing protein, expressed -
20 Sobic.003G360700 glycerol-3-phosphate acyltransferase, putative, expressed K13508: glycerol-3-phosphate acyltransferase


Gene co-expression network
sample Sobic004G333600 Sobic004G333600 Sobic004G308100 Sobic004G308100 Sobic004G333600--Sobic004G308100 Sobic010G181500 Sobic010G181500 Sobic004G333600--Sobic010G181500 Sobic009G088700 Sobic009G088700 Sobic004G333600--Sobic009G088700 Sobic001G487200 Sobic001G487200 Sobic004G333600--Sobic001G487200 Sobic003G419700 Sobic003G419700 Sobic004G333600--Sobic003G419700 Sobic002G179150 Sobic002G179150 Sobic004G333600--Sobic002G179150 Sobic006G218600 Sobic006G218600 Sobic004G333600--Sobic006G218600 Sobic001G113800 Sobic001G113800 Sobic004G333600--Sobic001G113800 Sobic001G083500 Sobic001G083500 Sobic004G333600--Sobic001G083500 Sobic004G287800 Sobic004G287800 Sobic004G308100--Sobic004G287800 Sobic003G013000 Sobic003G013000 Sobic004G308100--Sobic003G013000 Sobic004G308100--Sobic001G487200 Sobic002G370400 Sobic002G370400 Sobic004G308100--Sobic002G370400 Sobic002G161700 Sobic002G161700 Sobic004G308100--Sobic002G161700 Sobic006G254500 Sobic006G254500 Sobic004G308100--Sobic006G254500 Sobic004G308100--Sobic004G333600 Sobic006G272500 Sobic006G272500 Sobic004G308100--Sobic006G272500 Sobic007G166800 Sobic007G166800 Sobic004G308100--Sobic007G166800 Sobic010G181500--Sobic003G419700 Sobic010G010900 Sobic010G010900 Sobic010G181500--Sobic010G010900 Sobic001G074000 Sobic001G074000 Sobic010G181500--Sobic001G074000 Sobic001G522300 Sobic001G522300 Sobic010G181500--Sobic001G522300 Sobic010G181500--Sobic001G083500 Sobic010G111200 Sobic010G111200 Sobic010G181500--Sobic010G111200 Sobic003G338200 Sobic003G338200 Sobic010G181500--Sobic003G338200 Sobic005G104100 Sobic005G104100 Sobic010G181500--Sobic005G104100 Sobic003G360700 Sobic003G360700 Sobic010G181500--Sobic003G360700 Sobic002G220700 Sobic002G220700 Sobic009G088700--Sobic002G220700 Sobic009G088700--Sobic001G083500 Sobic003G100700 Sobic003G100700 Sobic009G088700--Sobic003G100700 Sobic001G015700 Sobic001G015700 Sobic009G088700--Sobic001G015700 Sobic003G078400 Sobic003G078400 Sobic009G088700--Sobic003G078400 Sobic003G091550 Sobic003G091550 Sobic009G088700--Sobic003G091550 Sobic006G068200 Sobic006G068200 Sobic009G088700--Sobic006G068200 Sobic004G313200 Sobic004G313200 Sobic009G088700--Sobic004G313200 Sobic006G122300 Sobic006G122300 Sobic009G088700--Sobic006G122300 Sobic004G315700 Sobic004G315700 Sobic001G487200--Sobic004G315700 Sobic009G212100 Sobic009G212100 Sobic001G487200--Sobic009G212100 Sobic001G369800 Sobic001G369800 Sobic001G487200--Sobic001G369800 Sobic001G231200 Sobic001G231200 Sobic001G487200--Sobic001G231200 Sobic001G487200--Sobic002G370400 Sobic003G226700 Sobic003G226700 Sobic001G487200--Sobic003G226700 Sobic001G540700 Sobic001G540700 Sobic001G487200--Sobic001G540700 Sobic001G296800 Sobic001G296800 Sobic001G487200--Sobic001G296800 Sobic007G084200 Sobic007G084200 Sobic001G487200--Sobic007G084200 Sobic003G419700--Sobic001G522300 Sobic003G419700--Sobic003G338200 Sobic003G419700--Sobic010G111200 Sobic003G419700--Sobic010G181500 Sobic010G216600 Sobic010G216600 Sobic003G419700--Sobic010G216600 Sobic003G419700--Sobic001G074000 Sobic003G419700--Sobic004G313200 Sobic003G419700--Sobic003G013000 Sobic004G248100 Sobic004G248100 Sobic003G419700--Sobic004G248100 Sobic002G247800 Sobic002G247800 Sobic002G179150--Sobic002G247800 Sobic007G214700 Sobic007G214700 Sobic002G179150--Sobic007G214700 Sobic001G107200 Sobic001G107200 Sobic002G179150--Sobic001G107200 Sobic001G389300 Sobic001G389300 Sobic002G179150--Sobic001G389300 Sobic002G179150--Sobic010G216600 Sobic001G030400 Sobic001G030400 Sobic002G179150--Sobic001G030400 Sobic001G528600 Sobic001G528600 Sobic002G179150--Sobic001G528600 Sobic002G353200 Sobic002G353200 Sobic002G179150--Sobic002G353200 Sobic002G179150--Sobic010G111200 Sobic001G069700 Sobic001G069700 Sobic006G218600--Sobic001G069700 Sobic003G442300 Sobic003G442300 Sobic006G218600--Sobic003G442300 Sobic003G277300 Sobic003G277300 Sobic006G218600--Sobic003G277300 Sobic001G013400 Sobic001G013400 Sobic006G218600--Sobic001G013400 Sobic001G456500 Sobic001G456500 Sobic006G218600--Sobic001G456500 Sobic006G134900 Sobic006G134900 Sobic006G218600--Sobic006G134900 Sobic005G098600 Sobic005G098600 Sobic006G218600--Sobic005G098600 Sobic001G105800 Sobic001G105800 Sobic006G218600--Sobic001G105800 Sobic001G142000 Sobic001G142000 Sobic006G218600--Sobic001G142000 Sobic001G113800--Sobic001G487200 Sobic001G113800--Sobic003G360700 Sobic001G113800--Sobic001G231200 Sobic003G230000 Sobic003G230000 Sobic001G113800--Sobic003G230000 Sobic010G135300 Sobic010G135300 Sobic001G113800--Sobic010G135300 Sobic001G113800--Sobic002G370400 Sobic002G002100 Sobic002G002100 Sobic001G113800--Sobic002G002100 Sobic001G113800--Sobic001G074000 Sobic001G113800--Sobic006G272500 Sobic001G083500--Sobic004G313200 Sobic002G335900 Sobic002G335900 Sobic001G083500--Sobic002G335900 Sobic001G083500--Sobic009G088700 Sobic002G337600 Sobic002G337600 Sobic001G083500--Sobic002G337600 Sobic001G083500--Sobic001G074000 Sobic002G160800 Sobic002G160800 Sobic001G083500--Sobic002G160800 Sobic001G452900 Sobic001G452900 Sobic001G083500--Sobic001G452900 Sobic001G083500--Sobic003G100700 Sobic001G199400 Sobic001G199400 Sobic001G083500--Sobic001G199400
Octagon: transcription factors


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