Gene annotation
Transcriptome id Sobic.005G086700.1,Sobic.005G086700.2,Sobic.005G086700.4
Synonym AtHB31, HB31, Sb05g007050
Functional annotation ZF-HD protein dimerisation region containing protein, expressed
UniProt A0A1B6PR18
Pfam PF04770
Panther DB PTHR31948 PTHR31948:SF19
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT2G02540 : homeobox protein 21
RAP-DB (Rice) LOC_Os11g13930.1 : ZF-HD protein dimerisation region containing protein, expressed
MaizeGDB (Corn) Zm00025a013920 , Zm00025a014112 , Zm00025a032466 , Zm00025a021731 , Zm00025a029545 , Zm00025a025639 , Zm00025a047321 , Zm00025a005471 , Zm00025a046976
Brachypodium KQJ88784 , KQJ90576 , KQK00949
Barley HORVU6Hr1G069090.2 , HORVU6Hr1G069090.1 , HORVU4Hr1G015250.9 , HORVU4Hr1G015250.8 , HORVU5Hr1G065740.1 , HORVU5Hr1G065740.3 , HORVU5Hr1G065740.2 , HORVU4Hr1G015250.1 , HORVU4Hr1G015250.3 , HORVU4Hr1G015250.2 , HORVU4Hr1G015250.5 , HORVU4Hr1G015250.4 , HORVU4Hr1G015250.7 , HORVU4Hr1G015250.6 , HORVU4Hr1G015250.10
Wheat -
Populus -


JBrowse

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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G536300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@KIP1, putative, expressed -
2 Sobic.003G390600 AP2/EREBP transcription factor BABY BOOM, putative, expressed K09285: OVM, AP2-like factor, ANT lineage
3 Sobic.006G027800 disease resistance RPP13-like protein 1, putative, expressed -
4 Sobic.001G534000 kinesin motor domain containing protein, putative, expressed K10406: kinesin family member C2/C3
5 Sobic.007G214900 EDM2, putative, expressed -
6 Sobic.004G044500 phytosulfokine receptor precursor, putative, expressed -
7 Sobic.006G103800 AGC_PVPK_like_CDK8.1 - ACG kinases include homologs to PKA, PKG and PKC, expressed -
8 Sobic.005G083400 expressed protein -
9 Sobic.004G345200 OsWAK11 - OsWAK receptor-like protein kinase, expressed -
10 Sobic.004G007200 - -
11 Sobic.001G084300 UDP-glucoronosyl and UDP-glucosyl transferase domain containing protein, expressed -
12 Sobic.010G201444 - -
13 Sobic.006G073700 expressed protein -
14 Sobic.003G145200 expressed protein -
15 Sobic.004G228000 DUF1771 domain containing protein, putative, expressed -
16 Sobic.006G024400 receptor-like protein kinase, putative, expressed -
17 Sobic.003G281400 "domain confirmed by Pfam database, expression supported by NCBI EST database, expressed in leaf and root, expression induced by IAA and BR treatments"(PubMedID : 20528920)@SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@ABC transporter, ATP-binding protein, putative, expressed K05658: ABCB1, ATP-binding cassette, subfamily B (MDR/TAP), member 1
18 Sobic.003G418900 expressed protein -
19 Sobic.004G084800 - -
20 Sobic.009G218450 - K05658: ABCB1, ATP-binding cassette, subfamily B (MDR/TAP), member 1


Gene co-expression network
sample Sobic005G086700 Sobic005G086700 Sobic001G536300 Sobic001G536300 Sobic005G086700--Sobic001G536300 Sobic003G390600 Sobic003G390600 Sobic005G086700--Sobic003G390600 Sobic006G027800 Sobic006G027800 Sobic005G086700--Sobic006G027800 Sobic001G534000 Sobic001G534000 Sobic005G086700--Sobic001G534000 Sobic007G214900 Sobic007G214900 Sobic005G086700--Sobic007G214900 Sobic004G044500 Sobic004G044500 Sobic005G086700--Sobic004G044500 Sobic006G103800 Sobic006G103800 Sobic005G086700--Sobic006G103800 Sobic005G083400 Sobic005G083400 Sobic005G086700--Sobic005G083400 Sobic004G345200 Sobic004G345200 Sobic005G086700--Sobic004G345200 Sobic003G145200 Sobic003G145200 Sobic001G536300--Sobic003G145200 Sobic001G536300--Sobic005G086700 Sobic001G354900 Sobic001G354900 Sobic001G536300--Sobic001G354900 Sobic004G258800 Sobic004G258800 Sobic001G536300--Sobic004G258800 Sobic007G174000 Sobic007G174000 Sobic001G536300--Sobic007G174000 Sobic001G084300 Sobic001G084300 Sobic001G536300--Sobic001G084300 Sobic004G045700 Sobic004G045700 Sobic001G536300--Sobic004G045700 Sobic010G275600 Sobic010G275600 Sobic001G536300--Sobic010G275600 Sobic004G073700 Sobic004G073700 Sobic001G536300--Sobic004G073700 Sobic003G281400 Sobic003G281400 Sobic003G390600--Sobic003G281400 Sobic003G390600--Sobic004G044500 Sobic003G390600--Sobic006G027800 Sobic007G174701 Sobic007G174701 Sobic003G390600--Sobic007G174701 Sobic004G084800 Sobic004G084800 Sobic003G390600--Sobic004G084800 Sobic003G390600--Sobic004G073700 Sobic004G341500 Sobic004G341500 Sobic003G390600--Sobic004G341500 Sobic003G390600--Sobic007G174000 Sobic003G390600--Sobic001G084300 Sobic009G180900 Sobic009G180900 Sobic006G027800--Sobic009G180900 Sobic009G218450 Sobic009G218450 Sobic006G027800--Sobic009G218450 Sobic010G175100 Sobic010G175100 Sobic006G027800--Sobic010G175100 Sobic008G064200 Sobic008G064200 Sobic006G027800--Sobic008G064200 Sobic006G027800--Sobic005G083400 Sobic010G201444 Sobic010G201444 Sobic006G027800--Sobic010G201444 Sobic001G005100 Sobic001G005100 Sobic006G027800--Sobic001G005100 Sobic006G027800--Sobic007G174000 Sobic004G221100 Sobic004G221100 Sobic006G027800--Sobic004G221100 Sobic001G430200 Sobic001G430200 Sobic001G534000--Sobic001G430200 Sobic002G269700 Sobic002G269700 Sobic001G534000--Sobic002G269700 Sobic006G196700 Sobic006G196700 Sobic001G534000--Sobic006G196700 Sobic002G152400 Sobic002G152400 Sobic001G534000--Sobic002G152400 Sobic006G281300 Sobic006G281300 Sobic001G534000--Sobic006G281300 Sobic007G218550 Sobic007G218550 Sobic001G534000--Sobic007G218550 Sobic002G213050 Sobic002G213050 Sobic001G534000--Sobic002G213050 Sobic004G055400 Sobic004G055400 Sobic001G534000--Sobic004G055400 Sobic006G018500 Sobic006G018500 Sobic001G534000--Sobic006G018500 Sobic005G065400 Sobic005G065400 Sobic007G214900--Sobic005G065400 Sobic002G285101 Sobic002G285101 Sobic007G214900--Sobic002G285101 Sobic002G088500 Sobic002G088500 Sobic007G214900--Sobic002G088500 Sobic001G453150 Sobic001G453150 Sobic007G214900--Sobic001G453150 Sobic010G002201 Sobic010G002201 Sobic007G214900--Sobic010G002201 Sobic010G213100 Sobic010G213100 Sobic007G214900--Sobic010G213100 Sobic003G271000 Sobic003G271000 Sobic007G214900--Sobic003G271000 Sobic003G091900 Sobic003G091900 Sobic007G214900--Sobic003G091900 Sobic003G336600 Sobic003G336600 Sobic007G214900--Sobic003G336600 Sobic004G044500--Sobic003G390600 Sobic004G044500--Sobic003G281400 Sobic004G081000 Sobic004G081000 Sobic004G044500--Sobic004G081000 Sobic007G200300 Sobic007G200300 Sobic004G044500--Sobic007G200300 Sobic002G280001 Sobic002G280001 Sobic004G044500--Sobic002G280001 Sobic005G014400 Sobic005G014400 Sobic004G044500--Sobic005G014400 Sobic006G024400 Sobic006G024400 Sobic004G044500--Sobic006G024400 Sobic006G154900 Sobic006G154900 Sobic004G044500--Sobic006G154900 Sobic005G031100 Sobic005G031100 Sobic004G044500--Sobic005G031100 Sobic006G103800--Sobic010G201444 Sobic006G103800--Sobic005G083400 Sobic007G175600 Sobic007G175600 Sobic006G103800--Sobic007G175600 Sobic003G251900 Sobic003G251900 Sobic006G103800--Sobic003G251900 Sobic003G234300 Sobic003G234300 Sobic006G103800--Sobic003G234300 Sobic006G103800--Sobic004G221100 Sobic006G103800--Sobic006G027800 Sobic006G111400 Sobic006G111400 Sobic006G103800--Sobic006G111400 Sobic001G093732 Sobic001G093732 Sobic006G103800--Sobic001G093732 Sobic005G083400--Sobic006G103800 Sobic005G083400--Sobic008G064200 Sobic005G083400--Sobic006G027800 Sobic005G083400--Sobic010G201444 Sobic006G075200 Sobic006G075200 Sobic005G083400--Sobic006G075200 Sobic005G083400--Sobic007G175600 Sobic005G083400--Sobic009G218450 Sobic004G203633 Sobic004G203633 Sobic005G083400--Sobic004G203633 Sobic002G365300 Sobic002G365300 Sobic005G083400--Sobic002G365300 Sobic002G035100 Sobic002G035100 Sobic004G345200--Sobic002G035100 Sobic010G118600 Sobic010G118600 Sobic004G345200--Sobic010G118600 Sobic010G068001 Sobic010G068001 Sobic004G345200--Sobic010G068001 Sobic008G151900 Sobic008G151900 Sobic004G345200--Sobic008G151900 Sobic010G118401 Sobic010G118401 Sobic004G345200--Sobic010G118401 Sobic003G418900 Sobic003G418900 Sobic004G345200--Sobic003G418900 Sobic005G116601 Sobic005G116601 Sobic004G345200--Sobic005G116601 Sobic004G345200--Sobic007G175600 Sobic004G228000 Sobic004G228000 Sobic004G345200--Sobic004G228000
Octagon: transcription factors


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