Gene annotation
| Transcriptome id | Sobic.005G107400.1 |
|---|---|
| Synonym | |
| Functional annotation | POT family protein, expressed |
| UniProt | A0A1Z5RHV3 |
| Pfam | PF00854 |
| Panther DB | PTHR11654 PTHR11654:SF140 |
| NCBI CDD | KOG1237; H+/oligopeptide symporter |
| KEGG Orthology | - |
| Gene Ontology | GO:0016020; membrane GO:0006810transport GO:0005215transporter activity |
Orthologs (automatic annotation)
| TAIR | AT1G27040 : Major facilitator superfamily protein |
|---|---|
| RAP-DB (Rice) | LOC_Os11g17970.1 : POT family protein, expressed |
| MaizeGDB (Corn) | - |
| Brachypodium | KQJ88780 |
| Barley | HORVU2Hr1G062730.10 , HORVU2Hr1G062730.11 , HORVU2Hr1G062730.12 , HORVU2Hr1G062730.13 , HORVU2Hr1G062730.2 , HORVU2Hr1G062730.3 , HORVU2Hr1G062730.6 , HORVU2Hr1G062730.7 , HORVU2Hr1G062730.4 , HORVU2Hr1G062730.5 , HORVU2Hr1G062730.8 , HORVU5Hr1G095020.9 , HORVU5Hr1G095020.8 , HORVU5Hr1G095020.3 , HORVU5Hr1G095020.2 , HORVU5Hr1G095020.1 , HORVU5Hr1G095020.7 , HORVU5Hr1G095020.6 , HORVU5Hr1G095020.5 , HORVU5Hr1G095020.4 |
| Wheat | TraesCS2A02G264500 , TraesCS2D02G259400 , TraesCS2D02G259400 , TraesCS2B02G277600 |
| Populus | - |
JBrowse
Expression pattern by RNA-Seq analysis
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Find similar expressed genes
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| Rank | Gene | Function | KEGG orthology |
|---|---|---|---|
| 1 | Sobic.009G250700 | pentatricopeptide repeat protein PPR986-12, putative, expressed | - |
| 2 | Sobic.003G342300 | dihydroflavonol-4-reductase, putative, expressed | - |
| 3 | Sobic.004G006100 | cytochrome P450, putative, expressed | - |
| 4 | Sobic.001G464700 | - | - |
| 5 | Sobic.002G083700 | - | - |
| 6 | Sobic.008G032701 | - | - |
| 7 | Sobic.001G372600 | DVR, putative, expressed | K19073: divinyl chlorophyllide a 8-vinyl-reductase |
| 8 | Sobic.003G099400 | cyclophilin-type(PubMedID : 29017446)@peptidyl-prolyl cis-trans isomerase, putative, expressed | K03768: PPIB, peptidyl-prolyl cis-trans isomerase B (cyclophilin B) |
| 9 | Sobic.007G181000 | serpin domain containing protein, putative, expressed | K13963: serpin B |
| 10 | Sobic.008G030200 | LTPL9 - Protease inhibitor/seed storage/LTP family protein precursor, expressed | - |
| 11 | Sobic.005G222300 | enoyl-CoA hydratase/isomerase family protein, putative, expressed | K05605: 3-hydroxyisobutyryl-CoA hydrolase |
| 12 | Sobic.003G120500 | transmembrane protein 136, putative, expressed | - |
| 13 | Sobic.001G192100 | "Belongs to the cytochrome P450 family, up-regulated under all the stress condition"(PubMedID : 24655390)@SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@Belongs to the cytochrome P450 family(PubMedID : 24655390)@Up-reguralion under heat(PubMedID : 24916767)@cytochrome P450, putative, expressed | - |
| 14 | Sobic.006G024800 | - | - |
| 15 | Sobic.010G255600 | thylakoid lumenal 16.5 kDa protein, chloroplast precursor, putative, expressed | - |
| 16 | Sobic.005G092401 | - | - |
| 17 | Sobic.003G069200 | transferase family protein, putative, expressed | K13065: E2.3.1.133, shikimate O-hydroxycinnamoyltransferase |
| 18 | Sobic.004G036100 | SAM dependent carboxyl methyltransferase, putative, expressed | - |
| 19 | Sobic.001G200100 | - | - |
| 20 | Sobic.010G229050 | - | - |
Gene co-expression network
Octagon: transcription factors
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