Gene annotation
Transcriptome id Sobic.005G144300.1
Synonym Sb05g020920
Functional annotation phospholipase, patatin family, putative, expressed
UniProt C5Y3W6
Pfam PF01734
Panther DB PTHR12406 PTHR12406:SF7
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0006629; lipid metabolic process


Orthologs (automatic annotation)
TAIR AT1G33270 : Acyl transferase/acyl hydrolase/lysophospholipase superfamily protein
RAP-DB (Rice) LOC_Os11g34370.1 : phospholipase, patatin family, putative, expressed
MaizeGDB (Corn) Zm00025a015724
Brachypodium -
Barley HORVU2Hr1G090340.10 , HORVU2Hr1G090340.11 , HORVU2Hr1G090340.8 , HORVU2Hr1G090340.9 , HORVU2Hr1G090340.6 , HORVU2Hr1G090340.7 , HORVU2Hr1G090340.4 , HORVU2Hr1G090340.5 , HORVU2Hr1G090340.2 , HORVU2Hr1G090340.3 , HORVU2Hr1G090340.1
Wheat TraesCS2D02G373600 , TraesCS2B02G394200 , TraesCS2A02G377000
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G342100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@dihydroflavonol-4-reductase, putative, expressed -
2 Sobic.001G073900 lactate/malate dehydrogenase, putative, expressed K00026: malate dehydrogenase
3 Sobic.008G094000 Sugar transporter(PubMedID : 27330561)@Sugar transporter(PubMedID : 27330561)@nodulin MtN3 family protein, putative, expressed K15382: SLC50A, solute carrier family 50 (sugar transporter)
4 Sobic.002G231200 Rf1, mitochondrial precursor, putative, expressed K17710: pentatricopeptide repeat domain-containing protein 1
5 Sobic.003G343500 NADH-ubiquinone oxidoreductase, mitochondrial precursor, putative, expressed K17871: NADH:ubiquinone reductase (non-electrogenic)
6 Sobic.003G146500 red chlorophyll catabolite reductase, putative, expressed K13545: RCCR, red chlorophyll catabolite reductase
7 Sobic.001G065600 -(PubMedID : 26976818)@hydroxyacid oxidase 1, putative, expressed K11517: (S)-2-hydroxy-acid oxidase
8 Sobic.001G062900 peptidase, putative, expressed K01301: N-acetylated-alpha-linked acidic dipeptidase
9 Sobic.008G001900 mitochondrial substrate carrier family protein, putative, expressed -
10 Sobic.001G531500 peroxisomal biogenesis factor 11, putative, expressed -
11 Sobic.003G343400 sufB/sufD domain containing protein, putative, expressed -
12 Sobic.003G217700 - -
13 Sobic.001G512500 expressed protein -
14 Sobic.004G298900 OR, putative, expressed -
15 Sobic.003G162100 membrane associated DUF588 domain containing protein, putative, expressed -
16 Sobic.005G001700 mitochondrial substrate carrier family protein, putative, expressed -
17 Sobic.001G465700 aminotransferase, putative, expressed K00833: adenosylmethionine---8-amino-7-oxononanoate aminotransferase
18 Sobic.004G054400 peptidyl-prolyl cis-trans isomerase, FKBP-type, putative, expressed -
19 Sobic.002G403600 Haloacid dehalogenase-like hydrolase (HAD) superfamily protein(PubMedID : 26465154)@Haloacid dehalogenase-like hydrolase (HAD) superfamily protein(PubMedID : 26465154)@SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@rhythmically expressed gene 2 protein, putative, expressed -
20 Sobic.004G042200 OsFBO8 - F-box and other domain containing protein, expressed K12115: clock-associated PAS protein ZTL


Gene co-expression network
sample Sobic005G144300 Sobic005G144300 Sobic003G342100 Sobic003G342100 Sobic005G144300--Sobic003G342100 Sobic001G073900 Sobic001G073900 Sobic005G144300--Sobic001G073900 Sobic008G094000 Sobic008G094000 Sobic005G144300--Sobic008G094000 Sobic002G231200 Sobic002G231200 Sobic005G144300--Sobic002G231200 Sobic003G343500 Sobic003G343500 Sobic005G144300--Sobic003G343500 Sobic003G146500 Sobic003G146500 Sobic005G144300--Sobic003G146500 Sobic001G065600 Sobic001G065600 Sobic005G144300--Sobic001G065600 Sobic001G062900 Sobic001G062900 Sobic005G144300--Sobic001G062900 Sobic008G001900 Sobic008G001900 Sobic005G144300--Sobic008G001900 Sobic003G342100--Sobic001G073900 Sobic003G342100--Sobic001G062900 Sobic003G332700 Sobic003G332700 Sobic003G342100--Sobic003G332700 Sobic009G242100 Sobic009G242100 Sobic003G342100--Sobic009G242100 Sobic005G045000 Sobic005G045000 Sobic003G342100--Sobic005G045000 Sobic003G426700 Sobic003G426700 Sobic003G342100--Sobic003G426700 Sobic001G531500 Sobic001G531500 Sobic003G342100--Sobic001G531500 Sobic006G064100 Sobic006G064100 Sobic003G342100--Sobic006G064100 Sobic002G049600 Sobic002G049600 Sobic003G342100--Sobic002G049600 Sobic001G073900--Sobic003G332700 Sobic001G073900--Sobic008G001900 Sobic008G117000 Sobic008G117000 Sobic001G073900--Sobic008G117000 Sobic001G073900--Sobic003G342100 Sobic001G073900--Sobic001G065600 Sobic001G073900--Sobic001G531500 Sobic005G001700 Sobic005G001700 Sobic001G073900--Sobic005G001700 Sobic004G235600 Sobic004G235600 Sobic001G073900--Sobic004G235600 Sobic001G073900--Sobic002G049600 Sobic008G094000--Sobic001G065600 Sobic001G003200 Sobic001G003200 Sobic008G094000--Sobic001G003200 Sobic008G094000--Sobic001G073900 Sobic008G094000--Sobic003G343500 Sobic010G067100 Sobic010G067100 Sobic008G094000--Sobic010G067100 Sobic010G099700 Sobic010G099700 Sobic008G094000--Sobic010G099700 Sobic006G133900 Sobic006G133900 Sobic008G094000--Sobic006G133900 Sobic008G115900 Sobic008G115900 Sobic008G094000--Sobic008G115900 Sobic003G442700 Sobic003G442700 Sobic008G094000--Sobic003G442700 Sobic001G327800 Sobic001G327800 Sobic002G231200--Sobic001G327800 Sobic001G261573 Sobic001G261573 Sobic002G231200--Sobic001G261573 Sobic003G343400 Sobic003G343400 Sobic002G231200--Sobic003G343400 Sobic003G234900 Sobic003G234900 Sobic002G231200--Sobic003G234900 Sobic006G010900 Sobic006G010900 Sobic002G231200--Sobic006G010900 Sobic003G085100 Sobic003G085100 Sobic002G231200--Sobic003G085100 Sobic002G231200--Sobic001G531500 Sobic002G118200 Sobic002G118200 Sobic002G231200--Sobic002G118200 Sobic003G150800 Sobic003G150800 Sobic002G231200--Sobic003G150800 Sobic001G512500 Sobic001G512500 Sobic003G343500--Sobic001G512500 Sobic003G343500--Sobic006G133900 Sobic003G343500--Sobic001G065600 Sobic006G065600 Sobic006G065600 Sobic003G343500--Sobic006G065600 Sobic007G167100 Sobic007G167100 Sobic003G343500--Sobic007G167100 Sobic003G370700 Sobic003G370700 Sobic003G343500--Sobic003G370700 Sobic002G193100 Sobic002G193100 Sobic003G343500--Sobic002G193100 Sobic010G176200 Sobic010G176200 Sobic003G343500--Sobic010G176200 Sobic010G058200 Sobic010G058200 Sobic003G343500--Sobic010G058200 Sobic003G146500--Sobic002G118200 Sobic003G146500--Sobic001G531500 Sobic004G070500 Sobic004G070500 Sobic003G146500--Sobic004G070500 Sobic007G090403 Sobic007G090403 Sobic003G146500--Sobic007G090403 Sobic003G146500--Sobic001G512500 Sobic003G146500--Sobic006G133900 Sobic009G123900 Sobic009G123900 Sobic003G146500--Sobic009G123900 Sobic005G118400 Sobic005G118400 Sobic003G146500--Sobic005G118400 Sobic009G093100 Sobic009G093100 Sobic003G146500--Sobic009G093100 Sobic001G158900 Sobic001G158900 Sobic001G065600--Sobic001G158900 Sobic001G065600--Sobic001G073900 Sobic005G188600 Sobic005G188600 Sobic001G065600--Sobic005G188600 Sobic001G065600--Sobic006G010900 Sobic001G065600--Sobic008G094000 Sobic001G484400 Sobic001G484400 Sobic001G065600--Sobic001G484400 Sobic002G036000 Sobic002G036000 Sobic001G065600--Sobic002G036000 Sobic001G065600--Sobic001G003200 Sobic003G003600 Sobic003G003600 Sobic001G065600--Sobic003G003600 Sobic001G062900--Sobic007G090403 Sobic001G062900--Sobic003G342100 Sobic009G215500 Sobic009G215500 Sobic001G062900--Sobic009G215500 Sobic001G062900--Sobic001G073900 Sobic001G530900 Sobic001G530900 Sobic001G062900--Sobic001G530900 Sobic001G062900--Sobic001G531500 Sobic001G062900--Sobic003G332700 Sobic001G105200 Sobic001G105200 Sobic001G062900--Sobic001G105200 Sobic001G062900--Sobic005G001700 Sobic008G001900--Sobic005G001700 Sobic008G001900--Sobic001G073900 Sobic008G001900--Sobic004G235600 Sobic008G001900--Sobic003G085100 Sobic008G001900--Sobic003G332700 Sobic004G054400 Sobic004G054400 Sobic008G001900--Sobic004G054400 Sobic005G063000 Sobic005G063000 Sobic008G001900--Sobic005G063000 Sobic005G204200 Sobic005G204200 Sobic008G001900--Sobic005G204200 Sobic001G465700 Sobic001G465700 Sobic008G001900--Sobic001G465700
Octagon: transcription factors


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