Gene annotation
Transcriptome id Sobic.005G163600.1,Sobic.005G163600.2,Sobic.005G163600.3
Synonym Sb05g022460
Functional annotation dnaJ domain containing protein, expressed
UniProt C5Y4Y8
Pfam PF00226 PF11926
Panther DB PTHR10825 PTHR10825:SF27
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G27240 : DNAJ heat shock N-terminal domain-containing protein
RAP-DB (Rice) LOC_Os11g36960.1 : dnaJ domain containing protein, expressed
MaizeGDB (Corn) Zm00025a033883
Brachypodium -
Barley HORVU3Hr1G051850.8 , HORVU3Hr1G051850.4 , HORVU3Hr1G051850.5 , HORVU3Hr1G051850.6 , HORVU3Hr1G051850.7 , HORVU3Hr1G051850.1 , HORVU3Hr1G051850.2 , HORVU3Hr1G051850.3 , HORVU3Hr1G051850.16 , HORVU3Hr1G051850.17 , HORVU3Hr1G051850.14 , HORVU3Hr1G051850.15 , HORVU3Hr1G051850.13
Wheat TraesCS3B02G244000 , TraesCS3B02G244000 , TraesCS3B02G244000 , TraesCS3D02G215900 , TraesCS3A02G213800 , TraesCS3A02G213800
Populus -


JBrowse

Open New Page


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G137300 methyladenine glycosylase, putative, expressed K01246: DNA-3-methyladenine glycosylase I
2 Sobic.007G023500 - -
3 Sobic.010G158832 - -
4 Sobic.009G166400 MCM8 - Putative minichromosome maintenance MCM family subunit 8, expressed K10737: DNA helicase MCM8
5 Sobic.010G078400 expressed protein -
6 Sobic.009G166650 - -
7 Sobic.002G390700 serine/threonine-protein kinase Haspin, putative, expressed K16315: serine/threonine-protein kinase haspin
8 Sobic.010G058400 expressed protein -
9 Sobic.009G195100 NLI interacting factor-like phosphatase, putative, expressed K17496: mitochondrial import inner membrane translocase subunit TIM50
10 Sobic.004G108700 - -
11 Sobic.006G218200 expressed protein -
12 Sobic.010G213000 RNA-dependent RNA polymerase, putative, expressed K11699: RDR, RNA-dependent RNA polymerase
13 Sobic.001G088400 kinesin motor domain containing protein, putative, expressed K10400: kinesin family member 15
14 Sobic.003G423800 endonuclease, putative, expressed K08991: crossover junction endonuclease MUS81
15 Sobic.010G009100 DNAJ heat shock N-terminal domain-containing protein, putative, expressed -
16 Sobic.001G001700 - -
17 Sobic.003G331750 - -
18 Sobic.001G509700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@pentatricopeptide repeat domain containing protein, putative, expressed -
19 Sobic.009G222400 expressed protein -
20 Sobic.003G013800 expressed protein -


Gene co-expression network
sample Sobic005G163600 Sobic005G163600 Sobic006G137300 Sobic006G137300 Sobic005G163600--Sobic006G137300 Sobic007G023500 Sobic007G023500 Sobic005G163600--Sobic007G023500 Sobic010G158832 Sobic010G158832 Sobic005G163600--Sobic010G158832 Sobic009G166400 Sobic009G166400 Sobic005G163600--Sobic009G166400 Sobic010G078400 Sobic010G078400 Sobic005G163600--Sobic010G078400 Sobic009G166650 Sobic009G166650 Sobic005G163600--Sobic009G166650 Sobic002G390700 Sobic002G390700 Sobic005G163600--Sobic002G390700 Sobic010G058400 Sobic010G058400 Sobic005G163600--Sobic010G058400 Sobic009G195100 Sobic009G195100 Sobic005G163600--Sobic009G195100 Sobic001G001700 Sobic001G001700 Sobic006G137300--Sobic001G001700 Sobic006G137300--Sobic010G078400 Sobic008G093700 Sobic008G093700 Sobic006G137300--Sobic008G093700 Sobic001G088400 Sobic001G088400 Sobic006G137300--Sobic001G088400 Sobic002G181800 Sobic002G181800 Sobic006G137300--Sobic002G181800 Sobic001G088000 Sobic001G088000 Sobic006G137300--Sobic001G088000 Sobic002G038500 Sobic002G038500 Sobic006G137300--Sobic002G038500 Sobic006G137300--Sobic005G163600 Sobic005G164900 Sobic005G164900 Sobic006G137300--Sobic005G164900 Sobic009G222400 Sobic009G222400 Sobic007G023500--Sobic009G222400 Sobic001G320000 Sobic001G320000 Sobic007G023500--Sobic001G320000 Sobic001G170301 Sobic001G170301 Sobic007G023500--Sobic001G170301 Sobic005G196600 Sobic005G196600 Sobic007G023500--Sobic005G196600 Sobic004G049600 Sobic004G049600 Sobic007G023500--Sobic004G049600 Sobic003G247000 Sobic003G247000 Sobic007G023500--Sobic003G247000 Sobic007G097000 Sobic007G097000 Sobic007G023500--Sobic007G097000 Sobic007G097100 Sobic007G097100 Sobic007G023500--Sobic007G097100 Sobic007G023500--Sobic005G163600 Sobic010G158832--Sobic001G088400 Sobic009G192700 Sobic009G192700 Sobic010G158832--Sobic009G192700 Sobic010G158832--Sobic005G163600 Sobic010G061500 Sobic010G061500 Sobic010G158832--Sobic010G061500 Sobic009G014500 Sobic009G014500 Sobic010G158832--Sobic009G014500 Sobic010G254700 Sobic010G254700 Sobic010G158832--Sobic010G254700 Sobic010G158832--Sobic002G390700 Sobic010G158832--Sobic009G166400 Sobic008G123000 Sobic008G123000 Sobic010G158832--Sobic008G123000 Sobic009G166400--Sobic009G166650 Sobic009G097500 Sobic009G097500 Sobic009G166400--Sobic009G097500 Sobic002G305900 Sobic002G305900 Sobic009G166400--Sobic002G305900 Sobic004G272950 Sobic004G272950 Sobic009G166400--Sobic004G272950 SobicK031300 SobicK031300 Sobic009G166400--SobicK031300 SobicK043600 SobicK043600 Sobic009G166400--SobicK043600 Sobic001G455300 Sobic001G455300 Sobic009G166400--Sobic001G455300 Sobic003G168600 Sobic003G168600 Sobic009G166400--Sobic003G168600 Sobic009G209650 Sobic009G209650 Sobic009G166400--Sobic009G209650 Sobic010G078400--Sobic002G390700 Sobic003G092000 Sobic003G092000 Sobic010G078400--Sobic003G092000 Sobic010G078400--Sobic006G137300 Sobic010G078400--Sobic001G001700 Sobic002G239800 Sobic002G239800 Sobic010G078400--Sobic002G239800 Sobic010G078400--Sobic005G164900 Sobic010G078400--Sobic001G088000 Sobic010G078400--Sobic002G038500 Sobic002G074500 Sobic002G074500 Sobic010G078400--Sobic002G074500 Sobic009G166650--Sobic009G166400 Sobic002G095800 Sobic002G095800 Sobic009G166650--Sobic002G095800 Sobic009G166650--Sobic002G305900 Sobic009G166650--Sobic001G455300 Sobic009G166650--Sobic002G390700 Sobic001G221601 Sobic001G221601 Sobic009G166650--Sobic001G221601 Sobic007G102600 Sobic007G102600 Sobic009G166650--Sobic007G102600 Sobic001G394000 Sobic001G394000 Sobic009G166650--Sobic001G394000 Sobic004G073800 Sobic004G073800 Sobic009G166650--Sobic004G073800 Sobic002G390700--Sobic010G078400 Sobic001G303300 Sobic001G303300 Sobic002G390700--Sobic001G303300 Sobic002G390700--Sobic001G221601 Sobic002G390700--Sobic002G074500 Sobic003G106800 Sobic003G106800 Sobic002G390700--Sobic003G106800 Sobic002G390700--Sobic003G092000 Sobic002G390700--Sobic009G166650 Sobic002G390700--Sobic009G014500 Sobic002G390700--Sobic002G239800 Sobic001G497800 Sobic001G497800 Sobic010G058400--Sobic001G497800 Sobic006G234500 Sobic006G234500 Sobic010G058400--Sobic006G234500 Sobic003G049000 Sobic003G049000 Sobic010G058400--Sobic003G049000 Sobic004G041000 Sobic004G041000 Sobic010G058400--Sobic004G041000 Sobic010G248100 Sobic010G248100 Sobic010G058400--Sobic010G248100 Sobic010G058400--Sobic002G074500 Sobic002G326900 Sobic002G326900 Sobic010G058400--Sobic002G326900 Sobic004G205700 Sobic004G205700 Sobic010G058400--Sobic004G205700 Sobic007G157400 Sobic007G157400 Sobic010G058400--Sobic007G157400 Sobic008G138850 Sobic008G138850 Sobic009G195100--Sobic008G138850 Sobic009G078300 Sobic009G078300 Sobic009G195100--Sobic009G078300 Sobic009G255400 Sobic009G255400 Sobic009G195100--Sobic009G255400 Sobic009G078401 Sobic009G078401 Sobic009G195100--Sobic009G078401 Sobic003G244850 Sobic003G244850 Sobic009G195100--Sobic003G244850 Sobic002G018200 Sobic002G018200 Sobic009G195100--Sobic002G018200 Sobic005G024500 Sobic005G024500 Sobic009G195100--Sobic005G024500 Sobic008G178701 Sobic008G178701 Sobic009G195100--Sobic008G178701 Sobic008G053500 Sobic008G053500 Sobic009G195100--Sobic008G053500
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.