Gene annotation
Transcriptome id Sobic.010G158832.1
Synonym -
Functional annotation -
UniProt A0A1W0VTA0
Pfam PF07983
Panther DB PTHR32227 PTHR32227:SF91
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G58100 : plasmodesmata callose-binding protein 5
RAP-DB (Rice) LOC_Os06g34660.1 : X8 domain containing protein, expressed
MaizeGDB (Corn) Zm00025a050957
Brachypodium PNT62429 , KQJ86083
Barley HORVU0Hr1G021460.2 , HORVU0Hr1G021440.2 , HORVU0Hr1G021440.1 , HORVU5Hr1G084900.13 , HORVU5Hr1G084900.2 , HORVU5Hr1G084900.3 , HORVU5Hr1G084900.6 , HORVU5Hr1G084900.7 , HORVU5Hr1G084900.4 , HORVU5Hr1G084900.5
Wheat TraesCS7A02G346300 , TraesCS7A02G346300 , TraesCS7B02G236800 , TraesCS7D02G332800
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G088400 kinesin motor domain containing protein, putative, expressed K10400: kinesin family member 15
2 Sobic.009G192700 ATBARD1/BARD1, putative, expressed K10683: BRCA1-associated RING domain protein 1
3 Sobic.005G163600 dnaJ domain containing protein, expressed -
4 Sobic.010G061500 OsFBLD6 - F-box, LRR and FBD domain containing protein, expressed -
5 Sobic.009G014500 expressed protein -
6 Sobic.010G254700 ternary complex factor MIP1, putative, expressed -
7 Sobic.002G390700 serine/threonine-protein kinase Haspin, putative, expressed K16315: serine/threonine-protein kinase haspin
8 Sobic.009G166400 MCM8 - Putative minichromosome maintenance MCM family subunit 8, expressed K10737: DNA helicase MCM8
9 Sobic.008G123000 kinesin-4, putative, expressed K10406: kinesin family member C2/C3
10 Sobic.009G166650 - -
11 Sobic.009G195100 NLI interacting factor-like phosphatase, putative, expressed K17496: mitochondrial import inner membrane translocase subunit TIM50
12 Sobic.003G056700 - -
13 Sobic.009G251700 DNA ligase, putative, expressed -
14 Sobic.004G073000 GA20292-PA, putative, expressed -
15 Sobic.003G043900 kinesin-4, putative, expressed K10406: kinesin family member C2/C3
16 Sobic.003G119200 kinesin motor domain containing protein, putative, expressed -
17 Sobic.008G093700 expressed protein -
18 Sobic.004G035300 - K10901: BLM, RECQL3, bloom syndrome protein
19 Sobic.001G109700 expressed protein K19001: HELLS, ATP-dependent DNA helicase
20 Sobic.001G230300 shugoshin-1, putative, expressed -


Gene co-expression network
sample Sobic010G158832 Sobic010G158832 Sobic001G088400 Sobic001G088400 Sobic010G158832--Sobic001G088400 Sobic009G192700 Sobic009G192700 Sobic010G158832--Sobic009G192700 Sobic005G163600 Sobic005G163600 Sobic010G158832--Sobic005G163600 Sobic010G061500 Sobic010G061500 Sobic010G158832--Sobic010G061500 Sobic009G014500 Sobic009G014500 Sobic010G158832--Sobic009G014500 Sobic010G254700 Sobic010G254700 Sobic010G158832--Sobic010G254700 Sobic002G390700 Sobic002G390700 Sobic010G158832--Sobic002G390700 Sobic009G166400 Sobic009G166400 Sobic010G158832--Sobic009G166400 Sobic008G123000 Sobic008G123000 Sobic010G158832--Sobic008G123000 Sobic007G067900 Sobic007G067900 Sobic001G088400--Sobic007G067900 Sobic002G113600 Sobic002G113600 Sobic001G088400--Sobic002G113600 Sobic004G073800 Sobic004G073800 Sobic001G088400--Sobic004G073800 Sobic001G088400--Sobic009G192700 Sobic006G137300 Sobic006G137300 Sobic001G088400--Sobic006G137300 Sobic010G213000 Sobic010G213000 Sobic001G088400--Sobic010G213000 Sobic002G294300 Sobic002G294300 Sobic001G088400--Sobic002G294300 Sobic005G164900 Sobic005G164900 Sobic001G088400--Sobic005G164900 Sobic001G088400--Sobic010G158832 Sobic002G272300 Sobic002G272300 Sobic009G192700--Sobic002G272300 Sobic009G192700--Sobic005G164900 Sobic003G008700 Sobic003G008700 Sobic009G192700--Sobic003G008700 Sobic008G075100 Sobic008G075100 Sobic009G192700--Sobic008G075100 Sobic009G192700--Sobic002G113600 Sobic003G043900 Sobic003G043900 Sobic009G192700--Sobic003G043900 Sobic001G230300 Sobic001G230300 Sobic009G192700--Sobic001G230300 Sobic004G020600 Sobic004G020600 Sobic009G192700--Sobic004G020600 Sobic009G192700--Sobic001G088400 Sobic005G163600--Sobic006G137300 Sobic007G023500 Sobic007G023500 Sobic005G163600--Sobic007G023500 Sobic005G163600--Sobic010G158832 Sobic005G163600--Sobic009G166400 Sobic010G078400 Sobic010G078400 Sobic005G163600--Sobic010G078400 Sobic009G166650 Sobic009G166650 Sobic005G163600--Sobic009G166650 Sobic005G163600--Sobic002G390700 Sobic010G058400 Sobic010G058400 Sobic005G163600--Sobic010G058400 Sobic009G195100 Sobic009G195100 Sobic005G163600--Sobic009G195100 Sobic003G354500 Sobic003G354500 Sobic010G061500--Sobic003G354500 Sobic004G306100 Sobic004G306100 Sobic010G061500--Sobic004G306100 Sobic008G160600 Sobic008G160600 Sobic010G061500--Sobic008G160600 Sobic002G271400 Sobic002G271400 Sobic010G061500--Sobic002G271400 Sobic006G126800 Sobic006G126800 Sobic010G061500--Sobic006G126800 Sobic004G095200 Sobic004G095200 Sobic010G061500--Sobic004G095200 Sobic003G013800 Sobic003G013800 Sobic010G061500--Sobic003G013800 Sobic003G409600 Sobic003G409600 Sobic010G061500--Sobic003G409600 Sobic010G061500--Sobic008G123000 Sobic002G074500 Sobic002G074500 Sobic009G014500--Sobic002G074500 Sobic009G014500--Sobic002G390700 Sobic001G088000 Sobic001G088000 Sobic009G014500--Sobic001G088000 Sobic002G095800 Sobic002G095800 Sobic009G014500--Sobic002G095800 Sobic003G025100 Sobic003G025100 Sobic009G014500--Sobic003G025100 Sobic003G384100 Sobic003G384100 Sobic009G014500--Sobic003G384100 Sobic009G042500 Sobic009G042500 Sobic009G014500--Sobic009G042500 Sobic001G221601 Sobic001G221601 Sobic009G014500--Sobic001G221601 Sobic009G014500--Sobic009G166650 Sobic001G105000 Sobic001G105000 Sobic010G254700--Sobic001G105000 Sobic010G254700--Sobic003G043900 Sobic010G254700--Sobic001G088400 Sobic004G243200 Sobic004G243200 Sobic010G254700--Sobic004G243200 Sobic004G064700 Sobic004G064700 Sobic010G254700--Sobic004G064700 Sobic004G203800 Sobic004G203800 Sobic010G254700--Sobic004G203800 Sobic001G304800 Sobic001G304800 Sobic010G254700--Sobic001G304800 Sobic001G109700 Sobic001G109700 Sobic010G254700--Sobic001G109700 Sobic010G254700--Sobic010G158832 Sobic002G390700--Sobic010G078400 Sobic001G303300 Sobic001G303300 Sobic002G390700--Sobic001G303300 Sobic002G390700--Sobic001G221601 Sobic002G390700--Sobic002G074500 Sobic003G106800 Sobic003G106800 Sobic002G390700--Sobic003G106800 Sobic003G092000 Sobic003G092000 Sobic002G390700--Sobic003G092000 Sobic002G390700--Sobic009G166650 Sobic002G390700--Sobic009G014500 Sobic002G239800 Sobic002G239800 Sobic002G390700--Sobic002G239800 Sobic009G166400--Sobic009G166650 Sobic009G097500 Sobic009G097500 Sobic009G166400--Sobic009G097500 Sobic002G305900 Sobic002G305900 Sobic009G166400--Sobic002G305900 Sobic004G272950 Sobic004G272950 Sobic009G166400--Sobic004G272950 SobicK031300 SobicK031300 Sobic009G166400--SobicK031300 SobicK043600 SobicK043600 Sobic009G166400--SobicK043600 Sobic001G455300 Sobic001G455300 Sobic009G166400--Sobic001G455300 Sobic003G168600 Sobic003G168600 Sobic009G166400--Sobic003G168600 Sobic009G209650 Sobic009G209650 Sobic009G166400--Sobic009G209650 Sobic006G183500 Sobic006G183500 Sobic008G123000--Sobic006G183500 Sobic001G332933 Sobic001G332933 Sobic008G123000--Sobic001G332933 Sobic002G276500 Sobic002G276500 Sobic008G123000--Sobic002G276500 Sobic010G241450 Sobic010G241450 Sobic008G123000--Sobic010G241450 Sobic002G189750 Sobic002G189750 Sobic008G123000--Sobic002G189750 Sobic001G110500 Sobic001G110500 Sobic008G123000--Sobic001G110500 Sobic006G265100 Sobic006G265100 Sobic008G123000--Sobic006G265100 Sobic003G204750 Sobic003G204750 Sobic008G123000--Sobic003G204750 Sobic007G070100 Sobic007G070100 Sobic008G123000--Sobic007G070100
Octagon: transcription factors


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