Gene annotation
Transcriptome id Sobic.010G254700.2
Synonym Sb10g029240
Functional annotation ternary complex factor MIP1, putative, expressed
UniProt A0A1W0VUR9
Pfam PF14389 PF04784
Panther DB PTHR23054 PTHR23054:SF30
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G13000 : Protein of unknown function, DUF547
RAP-DB (Rice) LOC_Os06g49060.1 : ternary complex factor MIP1, putative, expressed
MaizeGDB (Corn) Zm00025a018401
Brachypodium -
Barley -
Wheat TraesCS7A02G415300
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G105000 basic helix-loop-helix protein, putative, expressed -
2 Sobic.003G043900 kinesin-4, putative, expressed K10406: kinesin family member C2/C3
3 Sobic.001G088400 kinesin motor domain containing protein, putative, expressed K10400: kinesin family member 15
4 Sobic.004G243200 peptide transporter PTR2, putative, expressed K14638: SLC15A3_4, solute carrier family 15 (peptide/histidine transporter), member 3/4
5 Sobic.004G064700 tubby, putative, expressed -
6 Sobic.004G203800 steroid nuclear receptor, ligand-binding, putative, expressed -
7 Sobic.001G304800 expressed protein -
8 Sobic.001G109700 expressed protein K19001: HELLS, ATP-dependent DNA helicase
9 Sobic.010G158832 - -
10 Sobic.009G192700 ATBARD1/BARD1, putative, expressed K10683: BRCA1-associated RING domain protein 1
11 Sobic.005G164900 expressed protein -
12 Sobic.006G191900 ZR1 protein, putative, expressed -
13 Sobic.006G215200 caltractin, putative, expressed -
14 Sobic.010G017400 DLT(Ortholog in rice:Tong et al. (2012))(PubMedID : 31659927)@DELLA protein SLR1, putative, expressed -
15 Sobic.004G110500 expressed protein -
16 Sobic.001G131300 centromere protein, putative, expressed -
17 Sobic.005G030600 DNA-directed RNA polymerases I, II, and III subunit RPABC1, putative, expressed K03013: RPB5, DNA-directed RNA polymerases I, II, and III subunit RPABC1
18 Sobic.002G142200 expressed protein -
19 Sobic.004G233700 glycosyl hydrolase family 3 protein, putative, expressed -
20 Sobic.002G113600 rhoGAP domain containing protein, expressed -


Gene co-expression network
sample Sobic010G254700 Sobic010G254700 Sobic001G105000 Sobic001G105000 Sobic010G254700--Sobic001G105000 Sobic003G043900 Sobic003G043900 Sobic010G254700--Sobic003G043900 Sobic001G088400 Sobic001G088400 Sobic010G254700--Sobic001G088400 Sobic004G243200 Sobic004G243200 Sobic010G254700--Sobic004G243200 Sobic004G064700 Sobic004G064700 Sobic010G254700--Sobic004G064700 Sobic004G203800 Sobic004G203800 Sobic010G254700--Sobic004G203800 Sobic001G304800 Sobic001G304800 Sobic010G254700--Sobic001G304800 Sobic001G109700 Sobic001G109700 Sobic010G254700--Sobic001G109700 Sobic010G158832 Sobic010G158832 Sobic010G254700--Sobic010G158832 Sobic001G105000--Sobic010G254700 Sobic003G055400 Sobic003G055400 Sobic001G105000--Sobic003G055400 Sobic002G403700 Sobic002G403700 Sobic001G105000--Sobic002G403700 Sobic004G037100 Sobic004G037100 Sobic001G105000--Sobic004G037100 Sobic006G108500 Sobic006G108500 Sobic001G105000--Sobic006G108500 Sobic002G325500 Sobic002G325500 Sobic001G105000--Sobic002G325500 Sobic001G105000--Sobic004G064700 Sobic003G409500 Sobic003G409500 Sobic001G105000--Sobic003G409500 SobicK010100 SobicK010100 Sobic001G105000--SobicK010100 Sobic003G043900--Sobic001G109700 Sobic002G296000 Sobic002G296000 Sobic003G043900--Sobic002G296000 Sobic007G125300 Sobic007G125300 Sobic003G043900--Sobic007G125300 Sobic003G043900--Sobic001G304800 Sobic005G110535 Sobic005G110535 Sobic003G043900--Sobic005G110535 Sobic009G146250 Sobic009G146250 Sobic003G043900--Sobic009G146250 Sobic003G008700 Sobic003G008700 Sobic003G043900--Sobic003G008700 Sobic004G156200 Sobic004G156200 Sobic003G043900--Sobic004G156200 Sobic009G101100 Sobic009G101100 Sobic003G043900--Sobic009G101100 Sobic007G067900 Sobic007G067900 Sobic001G088400--Sobic007G067900 Sobic002G113600 Sobic002G113600 Sobic001G088400--Sobic002G113600 Sobic004G073800 Sobic004G073800 Sobic001G088400--Sobic004G073800 Sobic009G192700 Sobic009G192700 Sobic001G088400--Sobic009G192700 Sobic006G137300 Sobic006G137300 Sobic001G088400--Sobic006G137300 Sobic010G213000 Sobic010G213000 Sobic001G088400--Sobic010G213000 Sobic002G294300 Sobic002G294300 Sobic001G088400--Sobic002G294300 Sobic005G164900 Sobic005G164900 Sobic001G088400--Sobic005G164900 Sobic001G088400--Sobic010G158832 Sobic001G506900 Sobic001G506900 Sobic004G243200--Sobic001G506900 Sobic004G243200--Sobic010G254700 Sobic004G243200--Sobic004G037100 Sobic006G091400 Sobic006G091400 Sobic004G243200--Sobic006G091400 Sobic010G073000 Sobic010G073000 Sobic004G243200--Sobic010G073000 Sobic006G130600 Sobic006G130600 Sobic004G243200--Sobic006G130600 Sobic002G424500 Sobic002G424500 Sobic004G243200--Sobic002G424500 Sobic003G080600 Sobic003G080600 Sobic004G243200--Sobic003G080600 Sobic004G243200--SobicK010100 Sobic004G312400 Sobic004G312400 Sobic004G064700--Sobic004G312400 Sobic001G221601 Sobic001G221601 Sobic004G064700--Sobic001G221601 Sobic001G462300 Sobic001G462300 Sobic004G064700--Sobic001G462300 Sobic008G106100 Sobic008G106100 Sobic004G064700--Sobic008G106100 Sobic009G195500 Sobic009G195500 Sobic004G064700--Sobic009G195500 Sobic004G064700--Sobic003G409500 Sobic004G064700--Sobic001G088400 Sobic002G164900 Sobic002G164900 Sobic004G064700--Sobic002G164900 Sobic003G016950 Sobic003G016950 Sobic004G064700--Sobic003G016950 Sobic004G203800--Sobic010G254700 Sobic003G107000 Sobic003G107000 Sobic004G203800--Sobic003G107000 Sobic004G203800--Sobic010G213000 Sobic004G203800--Sobic001G088400 Sobic002G198801 Sobic002G198801 Sobic004G203800--Sobic002G198801 Sobic001G026400 Sobic001G026400 Sobic004G203800--Sobic001G026400 Sobic001G292500 Sobic001G292500 Sobic004G203800--Sobic001G292500 Sobic002G306500 Sobic002G306500 Sobic004G203800--Sobic002G306500 Sobic004G203800--Sobic003G043900 Sobic001G304800--Sobic002G296000 Sobic002G286700 Sobic002G286700 Sobic001G304800--Sobic002G286700 Sobic008G083500 Sobic008G083500 Sobic001G304800--Sobic008G083500 Sobic001G304800--Sobic009G101100 Sobic006G105600 Sobic006G105600 Sobic001G304800--Sobic006G105600 Sobic007G218100 Sobic007G218100 Sobic001G304800--Sobic007G218100 Sobic003G246800 Sobic003G246800 Sobic001G304800--Sobic003G246800 Sobic001G304800--Sobic009G146250 Sobic006G124400 Sobic006G124400 Sobic001G304800--Sobic006G124400 Sobic001G109700--Sobic003G043900 Sobic001G109700--Sobic007G125300 Sobic001G109700--Sobic005G110535 Sobic008G148000 Sobic008G148000 Sobic001G109700--Sobic008G148000 Sobic001G109700--Sobic002G296000 Sobic005G000500 Sobic005G000500 Sobic001G109700--Sobic005G000500 Sobic001G109700--Sobic001G304800 Sobic001G109700--Sobic004G156200 Sobic002G290000 Sobic002G290000 Sobic001G109700--Sobic002G290000 Sobic010G158832--Sobic001G088400 Sobic010G158832--Sobic009G192700 Sobic005G163600 Sobic005G163600 Sobic010G158832--Sobic005G163600 Sobic010G061500 Sobic010G061500 Sobic010G158832--Sobic010G061500 Sobic009G014500 Sobic009G014500 Sobic010G158832--Sobic009G014500 Sobic010G158832--Sobic010G254700 Sobic002G390700 Sobic002G390700 Sobic010G158832--Sobic002G390700 Sobic009G166400 Sobic009G166400 Sobic010G158832--Sobic009G166400 Sobic008G123000 Sobic008G123000 Sobic010G158832--Sobic008G123000
Octagon: transcription factors


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