Gene annotation
Transcriptome id Sobic.004G203800.1
Synonym Sb04g025010
Functional annotation steroid nuclear receptor, ligand-binding, putative, expressed
UniProt A0A194YQT5
Pfam -
Panther DB PTHR31133 PTHR31133:SF6
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G40640 : -
RAP-DB (Rice) LOC_Os02g38430.1 : steroid nuclear receptor, ligand-binding, putative, expressed
MaizeGDB (Corn) Zm00025a034348 , Zm00025a021293 , Zm00025a019141 , Zm00025a010613 , Zm00025a010964
Brachypodium KQK00182 , KQK00183 , KQJ83214
Barley HORVU6Hr1G054010.23 , HORVU6Hr1G054010.8 , HORVU6Hr1G054010.9 , HORVU6Hr1G054010.2 , HORVU6Hr1G054010.3 , HORVU6Hr1G054010.1 , HORVU6Hr1G054010.6 , HORVU6Hr1G054010.7 , HORVU6Hr1G054010.4 , HORVU6Hr1G054010.5 , HORVU6Hr1G054010.18 , HORVU6Hr1G054010.19 , HORVU6Hr1G054010.10 , HORVU6Hr1G054010.11 , HORVU6Hr1G054010.12 , HORVU6Hr1G054010.13 , HORVU6Hr1G054010.14 , HORVU6Hr1G054010.15 , HORVU6Hr1G054010.16 , HORVU6Hr1G054010.17 , HORVU6Hr1G054010.21 , HORVU6Hr1G054010.20 , HORVU6Hr1G054010.22
Wheat TraesCS6A02G213200 , TraesCS6D02G194500 , TraesCS6B02G240900
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G254700 ternary complex factor MIP1, putative, expressed -
2 Sobic.003G107000 receptor-like protein kinase precursor, putative, expressed -
3 Sobic.010G213000 RNA-dependent RNA polymerase, putative, expressed K11699: RDR, RNA-dependent RNA polymerase
4 Sobic.001G088400 kinesin motor domain containing protein, putative, expressed K10400: kinesin family member 15
5 Sobic.002G198801 - -
6 Sobic.001G026400 expressed protein K15446: TRM13, tRNA:m4X modification enzyme
7 Sobic.001G292500 - -
8 Sobic.002G306500 SNF7 domain containing protein, putative, expressed K12194: CHMP4, SNF7, charged multivesicular body protein 4
9 Sobic.003G043900 kinesin-4, putative, expressed K10406: kinesin family member C2/C3
10 Sobic.006G266000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@pentatricopeptide, putative, expressed -
11 Sobic.009G166650 - -
12 Sobic.002G113600 rhoGAP domain containing protein, expressed -
13 Sobic.007G067900 expressed protein -
14 Sobic.008G019600 Mad3/BUB1 homology region 1 domain containing protein, expressed -
15 Sobic.004G053100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@pentatricopeptide, putative, expressed -
16 Sobic.003G156700 Up-reguralion under drought(PubMedID : 24916767)@expressed protein -
17 Sobic.001G256400 pentatricopeptide, putative, expressed -
18 Sobic.009G192700 ATBARD1/BARD1, putative, expressed K10683: BRCA1-associated RING domain protein 1
19 Sobic.001G221601 - -
20 Sobic.009G166400 MCM8 - Putative minichromosome maintenance MCM family subunit 8, expressed K10737: DNA helicase MCM8


Gene co-expression network
sample Sobic004G203800 Sobic004G203800 Sobic010G254700 Sobic010G254700 Sobic004G203800--Sobic010G254700 Sobic003G107000 Sobic003G107000 Sobic004G203800--Sobic003G107000 Sobic010G213000 Sobic010G213000 Sobic004G203800--Sobic010G213000 Sobic001G088400 Sobic001G088400 Sobic004G203800--Sobic001G088400 Sobic002G198801 Sobic002G198801 Sobic004G203800--Sobic002G198801 Sobic001G026400 Sobic001G026400 Sobic004G203800--Sobic001G026400 Sobic001G292500 Sobic001G292500 Sobic004G203800--Sobic001G292500 Sobic002G306500 Sobic002G306500 Sobic004G203800--Sobic002G306500 Sobic003G043900 Sobic003G043900 Sobic004G203800--Sobic003G043900 Sobic001G105000 Sobic001G105000 Sobic010G254700--Sobic001G105000 Sobic010G254700--Sobic003G043900 Sobic010G254700--Sobic001G088400 Sobic004G243200 Sobic004G243200 Sobic010G254700--Sobic004G243200 Sobic004G064700 Sobic004G064700 Sobic010G254700--Sobic004G064700 Sobic010G254700--Sobic004G203800 Sobic001G304800 Sobic001G304800 Sobic010G254700--Sobic001G304800 Sobic001G109700 Sobic001G109700 Sobic010G254700--Sobic001G109700 Sobic010G158832 Sobic010G158832 Sobic010G254700--Sobic010G158832 Sobic009G118500 Sobic009G118500 Sobic003G107000--Sobic009G118500 Sobic001G221601 Sobic001G221601 Sobic003G107000--Sobic001G221601 Sobic003G107000--Sobic002G306500 Sobic004G053100 Sobic004G053100 Sobic003G107000--Sobic004G053100 Sobic005G030600 Sobic005G030600 Sobic003G107000--Sobic005G030600 Sobic003G107000--Sobic010G213000 Sobic006G276900 Sobic006G276900 Sobic003G107000--Sobic006G276900 Sobic007G067900 Sobic007G067900 Sobic003G107000--Sobic007G067900 Sobic002G403700 Sobic002G403700 Sobic003G107000--Sobic002G403700 Sobic010G213000--Sobic006G276900 Sobic001G061400 Sobic001G061400 Sobic010G213000--Sobic001G061400 Sobic001G519100 Sobic001G519100 Sobic010G213000--Sobic001G519100 Sobic010G213000--Sobic007G067900 Sobic007G097100 Sobic007G097100 Sobic010G213000--Sobic007G097100 Sobic002G265200 Sobic002G265200 Sobic010G213000--Sobic002G265200 Sobic010G213000--Sobic001G088400 Sobic001G170301 Sobic001G170301 Sobic010G213000--Sobic001G170301 Sobic001G075700 Sobic001G075700 Sobic010G213000--Sobic001G075700 Sobic001G088400--Sobic007G067900 Sobic002G113600 Sobic002G113600 Sobic001G088400--Sobic002G113600 Sobic004G073800 Sobic004G073800 Sobic001G088400--Sobic004G073800 Sobic009G192700 Sobic009G192700 Sobic001G088400--Sobic009G192700 Sobic006G137300 Sobic006G137300 Sobic001G088400--Sobic006G137300 Sobic001G088400--Sobic010G213000 Sobic002G294300 Sobic002G294300 Sobic001G088400--Sobic002G294300 Sobic005G164900 Sobic005G164900 Sobic001G088400--Sobic005G164900 Sobic001G088400--Sobic010G158832 Sobic002G198801--Sobic010G213000 Sobic008G075100 Sobic008G075100 Sobic002G198801--Sobic008G075100 Sobic002G198801--Sobic006G276900 Sobic010G024500 Sobic010G024500 Sobic002G198801--Sobic010G024500 Sobic003G352100 Sobic003G352100 Sobic002G198801--Sobic003G352100 Sobic009G211100 Sobic009G211100 Sobic002G198801--Sobic009G211100 Sobic008G113300 Sobic008G113300 Sobic002G198801--Sobic008G113300 Sobic004G359500 Sobic004G359500 Sobic002G198801--Sobic004G359500 Sobic009G238700 Sobic009G238700 Sobic002G198801--Sobic009G238700 Sobic005G100500 Sobic005G100500 Sobic001G026400--Sobic005G100500 Sobic003G398500 Sobic003G398500 Sobic001G026400--Sobic003G398500 Sobic004G208800 Sobic004G208800 Sobic001G026400--Sobic004G208800 Sobic001G102200 Sobic001G102200 Sobic001G026400--Sobic001G102200 Sobic010G224100 Sobic010G224100 Sobic001G026400--Sobic010G224100 Sobic006G094800 Sobic006G094800 Sobic001G026400--Sobic006G094800 Sobic002G198900 Sobic002G198900 Sobic001G026400--Sobic002G198900 Sobic006G108500 Sobic006G108500 Sobic001G026400--Sobic006G108500 Sobic001G026400--Sobic004G053100 Sobic004G253500 Sobic004G253500 Sobic001G292500--Sobic004G253500 Sobic003G041900 Sobic003G041900 Sobic001G292500--Sobic003G041900 Sobic003G251700 Sobic003G251700 Sobic001G292500--Sobic003G251700 Sobic010G250400 Sobic010G250400 Sobic001G292500--Sobic010G250400 Sobic002G259200 Sobic002G259200 Sobic001G292500--Sobic002G259200 Sobic006G211900 Sobic006G211900 Sobic001G292500--Sobic006G211900 Sobic002G168000 Sobic002G168000 Sobic001G292500--Sobic002G168000 Sobic009G099150 Sobic009G099150 Sobic001G292500--Sobic009G099150 Sobic001G292500--Sobic006G276900 Sobic002G306500--Sobic003G107000 Sobic003G156700 Sobic003G156700 Sobic002G306500--Sobic003G156700 Sobic001G365266 Sobic001G365266 Sobic002G306500--Sobic001G365266 Sobic002G306500--Sobic005G030600 Sobic002G180100 Sobic002G180100 Sobic002G306500--Sobic002G180100 Sobic002G306500--Sobic004G053100 Sobic001G032550 Sobic001G032550 Sobic002G306500--Sobic001G032550 Sobic003G186600 Sobic003G186600 Sobic002G306500--Sobic003G186600 Sobic009G166650 Sobic009G166650 Sobic002G306500--Sobic009G166650 Sobic003G043900--Sobic001G109700 Sobic002G296000 Sobic002G296000 Sobic003G043900--Sobic002G296000 Sobic007G125300 Sobic007G125300 Sobic003G043900--Sobic007G125300 Sobic003G043900--Sobic001G304800 Sobic005G110535 Sobic005G110535 Sobic003G043900--Sobic005G110535 Sobic009G146250 Sobic009G146250 Sobic003G043900--Sobic009G146250 Sobic003G008700 Sobic003G008700 Sobic003G043900--Sobic003G008700 Sobic004G156200 Sobic004G156200 Sobic003G043900--Sobic004G156200 Sobic009G101100 Sobic009G101100 Sobic003G043900--Sobic009G101100
Octagon: transcription factors


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