Gene annotation
Transcriptome id Sobic.003G156700.4,Sobic.003G156700.2,Sobic.003G156700.3,Sobic.003G156700.5
Synonym Sb03g013660
Functional annotation Up-reguralion under drought (PubMedID : 24916767)
expressed protein
UniProt C5XJU1 , A0A1W0VXE5
Pfam -
Panther DB PTHR35717 PTHR35717:SF1
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT2G25920 : -
RAP-DB (Rice) LOC_Os05g06420.1 : expressed protein
MaizeGDB (Corn) Zm00025a036177
Brachypodium PNT70467 , PNT70466
Barley -
Wheat -
Populus -


JBrowse

Open New Page


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G306500 SNF7 domain containing protein, putative, expressed K12194: CHMP4, SNF7, charged multivesicular body protein 4
2 Sobic.006G084201 - -
3 Sobic.001G365266 - -
4 Sobic.002G180100 hypersensitive-induced response protein, putative, expressed -
5 Sobic.002G205000 ZOS9-06 - C2H2 zinc finger protein, expressed -
6 Sobic.007G067900 expressed protein -
7 Sobic.003G243100 expressed protein -
8 Sobic.007G137101 R2R3 MYB transcription factor(PubMedID : 33633216) K09422: transcription factor MYB, plant
9 Sobic.001G042700 expressed protein -
10 Sobic.008G044600 expressed protein -
11 Sobic.004G024500 plant neutral invertase domain containing protein, expressed -
12 Sobic.010G220800 zinc-binding protein, putative, expressed -
13 Sobic.006G202100 WD repeat-containing protein, putative, expressed -
14 Sobic.006G171050 - -
15 Sobic.004G003700 Trihelix Family(PubMedID : 24864043)@expressed protein -
16 Sobic.007G121200 YDG/SRA domain containing protein, expressed -
17 Sobic.001G143400 Trihelix Family(PubMedID : 24864043)@transcription factor, putative, expressed -
18 Sobic.003G319900 "domain confirmed by Pfam database, expressed in leaf and root"(PubMedID : 20499123)@OsGH3.1 - Probable indole-3-acetic acid-amido synthetase, expressed K14487: auxin responsive GH3 gene family
19 Sobic.010G255000 uncharacterized protein At4g06744 precursor, putative, expressed -
20 Sobic.003G046400 transcriptional corepressor LEUNIG, putative, expressed -


Gene co-expression network
sample Sobic003G156700 Sobic003G156700 Sobic002G306500 Sobic002G306500 Sobic003G156700--Sobic002G306500 Sobic006G084201 Sobic006G084201 Sobic003G156700--Sobic006G084201 Sobic001G365266 Sobic001G365266 Sobic003G156700--Sobic001G365266 Sobic002G180100 Sobic002G180100 Sobic003G156700--Sobic002G180100 Sobic002G205000 Sobic002G205000 Sobic003G156700--Sobic002G205000 Sobic007G067900 Sobic007G067900 Sobic003G156700--Sobic007G067900 Sobic003G243100 Sobic003G243100 Sobic003G156700--Sobic003G243100 Sobic007G137101 Sobic007G137101 Sobic003G156700--Sobic007G137101 Sobic001G042700 Sobic001G042700 Sobic003G156700--Sobic001G042700 Sobic003G107000 Sobic003G107000 Sobic002G306500--Sobic003G107000 Sobic002G306500--Sobic003G156700 Sobic002G306500--Sobic001G365266 Sobic005G030600 Sobic005G030600 Sobic002G306500--Sobic005G030600 Sobic002G306500--Sobic002G180100 Sobic004G053100 Sobic004G053100 Sobic002G306500--Sobic004G053100 Sobic001G032550 Sobic001G032550 Sobic002G306500--Sobic001G032550 Sobic003G186600 Sobic003G186600 Sobic002G306500--Sobic003G186600 Sobic009G166650 Sobic009G166650 Sobic002G306500--Sobic009G166650 Sobic001G143400 Sobic001G143400 Sobic006G084201--Sobic001G143400 Sobic002G268300 Sobic002G268300 Sobic006G084201--Sobic002G268300 Sobic010G220800 Sobic010G220800 Sobic006G084201--Sobic010G220800 Sobic004G000800 Sobic004G000800 Sobic006G084201--Sobic004G000800 Sobic010G168700 Sobic010G168700 Sobic006G084201--Sobic010G168700 Sobic004G003700 Sobic004G003700 Sobic006G084201--Sobic004G003700 Sobic001G313800 Sobic001G313800 Sobic006G084201--Sobic001G313800 Sobic002G426000 Sobic002G426000 Sobic006G084201--Sobic002G426000 Sobic009G047500 Sobic009G047500 Sobic006G084201--Sobic009G047500 Sobic001G365266--Sobic002G306500 Sobic001G365266--Sobic004G053100 Sobic001G221601 Sobic001G221601 Sobic001G365266--Sobic001G221601 Sobic001G365266--Sobic005G030600 Sobic001G365266--Sobic003G156700 Sobic002G403700 Sobic002G403700 Sobic001G365266--Sobic002G403700 Sobic001G095432 Sobic001G095432 Sobic001G365266--Sobic001G095432 Sobic010G213000 Sobic010G213000 Sobic001G365266--Sobic010G213000 Sobic001G365266--Sobic003G107000 Sobic003G243000 Sobic003G243000 Sobic002G180100--Sobic003G243000 Sobic002G180100--Sobic002G306500 Sobic004G299200 Sobic004G299200 Sobic002G180100--Sobic004G299200 Sobic007G192900 Sobic007G192900 Sobic002G180100--Sobic007G192900 Sobic001G497800 Sobic001G497800 Sobic002G180100--Sobic001G497800 Sobic003G092000 Sobic003G092000 Sobic002G180100--Sobic003G092000 Sobic005G141200 Sobic005G141200 Sobic002G180100--Sobic005G141200 Sobic002G180100--Sobic003G156700 Sobic009G211300 Sobic009G211300 Sobic002G180100--Sobic009G211300 Sobic009G243000 Sobic009G243000 Sobic002G205000--Sobic009G243000 Sobic007G033700 Sobic007G033700 Sobic002G205000--Sobic007G033700 Sobic002G078900 Sobic002G078900 Sobic002G205000--Sobic002G078900 Sobic004G237000 Sobic004G237000 Sobic002G205000--Sobic004G237000 Sobic003G091700 Sobic003G091700 Sobic002G205000--Sobic003G091700 Sobic003G319900 Sobic003G319900 Sobic002G205000--Sobic003G319900 Sobic001G137600 Sobic001G137600 Sobic002G205000--Sobic001G137600 Sobic003G006000 Sobic003G006000 Sobic002G205000--Sobic003G006000 Sobic005G131000 Sobic005G131000 Sobic002G205000--Sobic005G131000 Sobic006G276900 Sobic006G276900 Sobic007G067900--Sobic006G276900 Sobic006G140801 Sobic006G140801 Sobic007G067900--Sobic006G140801 Sobic007G067900--Sobic010G213000 Sobic001G135600 Sobic001G135600 Sobic007G067900--Sobic001G135600 Sobic001G088400 Sobic001G088400 Sobic007G067900--Sobic001G088400 Sobic010G206400 Sobic010G206400 Sobic007G067900--Sobic010G206400 Sobic002G206100 Sobic002G206100 Sobic007G067900--Sobic002G206100 Sobic002G113600 Sobic002G113600 Sobic007G067900--Sobic002G113600 Sobic005G164900 Sobic005G164900 Sobic007G067900--Sobic005G164900 Sobic001G456000 Sobic001G456000 Sobic003G243100--Sobic001G456000 Sobic003G243100--Sobic002G078900 Sobic002G344201 Sobic002G344201 Sobic003G243100--Sobic002G344201 Sobic001G459300 Sobic001G459300 Sobic003G243100--Sobic001G459300 Sobic003G300000 Sobic003G300000 Sobic003G243100--Sobic003G300000 Sobic003G092400 Sobic003G092400 Sobic003G243100--Sobic003G092400 Sobic010G048600 Sobic010G048600 Sobic003G243100--Sobic010G048600 Sobic001G459400 Sobic001G459400 Sobic003G243100--Sobic001G459400 Sobic007G121200 Sobic007G121200 Sobic003G243100--Sobic007G121200 Sobic007G137101--Sobic007G121200 Sobic001G106500 Sobic001G106500 Sobic007G137101--Sobic001G106500 Sobic007G137101--Sobic001G456000 Sobic010G183800 Sobic010G183800 Sobic007G137101--Sobic010G183800 Sobic010G255000 Sobic010G255000 Sobic007G137101--Sobic010G255000 Sobic007G137101--Sobic010G048600 Sobic007G137101--Sobic001G459300 Sobic003G092300 Sobic003G092300 Sobic007G137101--Sobic003G092300 Sobic007G137101--Sobic001G459400 Sobic003G090600 Sobic003G090600 Sobic001G042700--Sobic003G090600 Sobic007G023100 Sobic007G023100 Sobic001G042700--Sobic007G023100 Sobic006G107500 Sobic006G107500 Sobic001G042700--Sobic006G107500 Sobic002G360600 Sobic002G360600 Sobic001G042700--Sobic002G360600 Sobic002G430700 Sobic002G430700 Sobic001G042700--Sobic002G430700 Sobic006G163300 Sobic006G163300 Sobic001G042700--Sobic006G163300 Sobic010G087600 Sobic010G087600 Sobic001G042700--Sobic010G087600 Sobic001G271600 Sobic001G271600 Sobic001G042700--Sobic001G271600 Sobic003G019900 Sobic003G019900 Sobic001G042700--Sobic003G019900
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.