Gene annotation
Transcriptome id Sobic.001G042700.1
Synonym Sb01g003930
Functional annotation expressed protein
UniProt C5WW11
Pfam PF04195
Panther DB PTHR31099
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) LOC_Os06g06950.1 : expressed protein
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G090600 seven in absentia protein family protein, putative, expressed -
2 Sobic.007G023100 CCT motif family protein, expressed -
3 Sobic.006G107500 MYB family transcription factor, putative, expressed K09422: transcription factor MYB, plant
4 Sobic.002G360600 expressed protein -
5 Sobic.002G430700 glycosyltransferase family 43 protein, putative, expressed -
6 Sobic.006G163300 aldehyde dehydrogenase, putative, expressed K00128: aldehyde dehydrogenase (NAD+)
7 Sobic.010G087600 heat shock 22 kDa protein, mitochondrial precursor, putative, expressed K13993: HSP20 family protein
8 Sobic.001G271600 transferase family protein, putative, expressed -
9 Sobic.003G019900 GDSL-like lipase/acylhydrolase, putative, expressed -
10 Sobic.006G274200 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@Eukaryotic aspartyl protease domain containing protein, expressed -
11 Sobic.003G085900 Glycosyl hydrolase. predicted target of sbi-miR-5568 and sbi-miR-6220 expressed in the stems of sweet sorghum(PubMedID : 26117170)@glycosyl hydrolase, family 31, putative, expressed K15925: alpha-D-xyloside xylohydrolase
12 Sobic.009G146700 universal stress protein domain containing protein, putative, expressed -
13 Sobic.003G338700 LTPL16 - Protease inhibitor/seed storage/LTP family protein precursor, expressed -
14 Sobic.010G070900 keratin, type I cytoskeletal 9, putative, expressed -
15 Sobic.010G276600 PAZ domain containing protein, putative, expressed K11593: ELF2C, eukaryotic translation initiation factor 2C
16 Sobic.007G147200 OsSub56 - Putative Subtilisin homologue, expressed -
17 Sobic.010G014700 expressed protein -
18 Sobic.003G008800 expressed protein -
19 Sobic.006G228000 glycine-rich protein 2, putative -
20 Sobic.003G010700 plant-specific domain TIGR01568 family protein, expressed -


Gene co-expression network
sample Sobic001G042700 Sobic001G042700 Sobic003G090600 Sobic003G090600 Sobic001G042700--Sobic003G090600 Sobic007G023100 Sobic007G023100 Sobic001G042700--Sobic007G023100 Sobic006G107500 Sobic006G107500 Sobic001G042700--Sobic006G107500 Sobic002G360600 Sobic002G360600 Sobic001G042700--Sobic002G360600 Sobic002G430700 Sobic002G430700 Sobic001G042700--Sobic002G430700 Sobic006G163300 Sobic006G163300 Sobic001G042700--Sobic006G163300 Sobic010G087600 Sobic010G087600 Sobic001G042700--Sobic010G087600 Sobic001G271600 Sobic001G271600 Sobic001G042700--Sobic001G271600 Sobic003G019900 Sobic003G019900 Sobic001G042700--Sobic003G019900 Sobic003G090600--Sobic002G430700 Sobic003G085900 Sobic003G085900 Sobic003G090600--Sobic003G085900 Sobic003G090600--Sobic007G023100 Sobic003G090600--Sobic006G107500 Sobic003G090600--Sobic001G271600 Sobic003G090600--Sobic006G163300 Sobic006G271600 Sobic006G271600 Sobic003G090600--Sobic006G271600 Sobic003G090600--Sobic002G360600 Sobic003G046400 Sobic003G046400 Sobic003G090600--Sobic003G046400 Sobic007G023100--Sobic003G090600 Sobic007G147200 Sobic007G147200 Sobic007G023100--Sobic007G147200 Sobic007G023100--Sobic002G430700 Sobic007G023100--Sobic006G107500 Sobic005G062600 Sobic005G062600 Sobic007G023100--Sobic005G062600 Sobic007G033700 Sobic007G033700 Sobic007G023100--Sobic007G033700 Sobic007G023100--Sobic003G019900 Sobic007G128100 Sobic007G128100 Sobic007G023100--Sobic007G128100 Sobic007G023100--Sobic006G163300 Sobic006G107500--Sobic002G360600 Sobic010G070900 Sobic010G070900 Sobic006G107500--Sobic010G070900 Sobic006G107500--Sobic010G087600 Sobic006G107500--Sobic003G085900 Sobic006G107500--Sobic006G163300 Sobic009G146700 Sobic009G146700 Sobic006G107500--Sobic009G146700 Sobic006G107500--Sobic007G147200 Sobic006G107500--Sobic002G430700 Sobic003G338700 Sobic003G338700 Sobic006G107500--Sobic003G338700 Sobic002G360600--Sobic006G107500 Sobic002G360600--Sobic006G163300 Sobic002G360600--Sobic010G087600 Sobic002G360600--Sobic010G070900 Sobic003G010700 Sobic003G010700 Sobic002G360600--Sobic003G010700 Sobic002G360600--Sobic003G085900 Sobic002G360600--Sobic009G146700 Sobic002G360600--Sobic003G338700 Sobic002G360600--Sobic003G046400 Sobic002G430700--Sobic006G107500 Sobic002G430700--Sobic003G085900 Sobic002G430700--Sobic006G163300 Sobic002G430700--Sobic002G360600 Sobic002G430700--Sobic010G070900 Sobic002G430700--Sobic003G090600 Sobic002G430700--Sobic003G046400 Sobic002G430700--Sobic007G147200 Sobic010G014500 Sobic010G014500 Sobic002G430700--Sobic010G014500 Sobic006G163300--Sobic002G360600 Sobic001G455900 Sobic001G455900 Sobic006G163300--Sobic001G455900 Sobic006G163300--Sobic003G046400 Sobic006G163300--Sobic003G010700 Sobic006G163300--Sobic010G070900 Sobic006G163300--Sobic007G147200 Sobic006G163300--Sobic007G033700 Sobic006G163300--Sobic006G107500 Sobic001G101900 Sobic001G101900 Sobic006G163300--Sobic001G101900 Sobic010G087600--Sobic002G360600 Sobic010G087600--Sobic006G107500 Sobic004G215400 Sobic004G215400 Sobic010G087600--Sobic004G215400 Sobic010G087700 Sobic010G087700 Sobic010G087600--Sobic010G087700 Sobic010G087600--Sobic009G146700 Sobic010G014700 Sobic010G014700 Sobic010G087600--Sobic010G014700 Sobic006G068200 Sobic006G068200 Sobic010G087600--Sobic006G068200 Sobic002G363300 Sobic002G363300 Sobic010G087600--Sobic002G363300 Sobic001G108100 Sobic001G108100 Sobic010G087600--Sobic001G108100 Sobic003G365800 Sobic003G365800 Sobic001G271600--Sobic003G365800 Sobic005G020100 Sobic005G020100 Sobic001G271600--Sobic005G020100 Sobic003G374100 Sobic003G374100 Sobic001G271600--Sobic003G374100 Sobic001G271600--Sobic006G107500 Sobic006G228000 Sobic006G228000 Sobic001G271600--Sobic006G228000 Sobic003G295100 Sobic003G295100 Sobic001G271600--Sobic003G295100 Sobic001G271600--Sobic003G090600 Sobic009G169800 Sobic009G169800 Sobic001G271600--Sobic009G169800 Sobic001G271600--Sobic003G085900 Sobic006G274200 Sobic006G274200 Sobic003G019900--Sobic006G274200 Sobic001G493900 Sobic001G493900 Sobic003G019900--Sobic001G493900 Sobic003G019900--Sobic003G338700 Sobic008G151600 Sobic008G151600 Sobic003G019900--Sobic008G151600 Sobic003G019900--Sobic007G147200 Sobic003G019900--Sobic010G014500 Sobic003G019900--Sobic006G163300 Sobic001G074000 Sobic001G074000 Sobic003G019900--Sobic001G074000 Sobic004G267600 Sobic004G267600 Sobic003G019900--Sobic004G267600
Octagon: transcription factors


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