Gene annotation
Transcriptome id Sobic.001G365266.1
Synonym -
Functional annotation -
UniProt A0A1Z5S9G8
Pfam PF14291
Panther DB PTHR11697 PTHR11697:SF106
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G19260 : TTF-type zinc finger protein with HAT dimerisation domain
RAP-DB (Rice) LOC_Os11g14270.1 : transposon protein, putative, unclassified, expressed
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G306500 SNF7 domain containing protein, putative, expressed K12194: CHMP4, SNF7, charged multivesicular body protein 4
2 Sobic.004G053100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@pentatricopeptide, putative, expressed -
3 Sobic.001G221601 - -
4 Sobic.005G030600 DNA-directed RNA polymerases I, II, and III subunit RPABC1, putative, expressed K03013: RPB5, DNA-directed RNA polymerases I, II, and III subunit RPABC1
5 Sobic.003G156700 Up-reguralion under drought(PubMedID : 24916767)@expressed protein -
6 Sobic.002G403700 condensin complex subunit 1, putative, expressed K06677: YCS4, CNAP1, condensin complex subunit 1
7 Sobic.001G095432 - -
8 Sobic.010G213000 RNA-dependent RNA polymerase, putative, expressed K11699: RDR, RNA-dependent RNA polymerase
9 Sobic.003G107000 receptor-like protein kinase precursor, putative, expressed -
10 Sobic.007G067900 expressed protein -
11 Sobic.006G276900 expressed protein -
12 Sobic.004G054600 porphobilinogen deaminase, chloroplast precursor, putative, expressed -
13 Sobic.009G192700 ATBARD1/BARD1, putative, expressed K10683: BRCA1-associated RING domain protein 1
14 Sobic.004G248300 dynein light chain type 1 domain containing protein, expressed K10418: dynein light chain LC8-type
15 Sobic.004G064700 tubby, putative, expressed -
16 Sobic.002G206100 aspartic proteinase, putative, expressed -
17 Sobic.002G180100 hypersensitive-induced response protein, putative, expressed -
18 Sobic.008G017600 Up-reguralion under heat(PubMedID : 24916767)@Up-reguralion under combine stress of drought and heat(PubMedID : 24916767)@no apical meristem protein, putative, expressed -
19 Sobic.007G070100 tentative name(PubMedID : 31536532)@core histone H2A/H2B/H3/H4, putative, expressed K08066: NFYC, nuclear transcription factor Y, gamma
20 Sobic.009G213950 - K04799: FEN1, flap endonuclease-1


Gene co-expression network
sample Sobic001G365266 Sobic001G365266 Sobic002G306500 Sobic002G306500 Sobic001G365266--Sobic002G306500 Sobic004G053100 Sobic004G053100 Sobic001G365266--Sobic004G053100 Sobic001G221601 Sobic001G221601 Sobic001G365266--Sobic001G221601 Sobic005G030600 Sobic005G030600 Sobic001G365266--Sobic005G030600 Sobic003G156700 Sobic003G156700 Sobic001G365266--Sobic003G156700 Sobic002G403700 Sobic002G403700 Sobic001G365266--Sobic002G403700 Sobic001G095432 Sobic001G095432 Sobic001G365266--Sobic001G095432 Sobic010G213000 Sobic010G213000 Sobic001G365266--Sobic010G213000 Sobic003G107000 Sobic003G107000 Sobic001G365266--Sobic003G107000 Sobic002G306500--Sobic003G107000 Sobic002G306500--Sobic003G156700 Sobic002G306500--Sobic001G365266 Sobic002G306500--Sobic005G030600 Sobic002G180100 Sobic002G180100 Sobic002G306500--Sobic002G180100 Sobic002G306500--Sobic004G053100 Sobic001G032550 Sobic001G032550 Sobic002G306500--Sobic001G032550 Sobic003G186600 Sobic003G186600 Sobic002G306500--Sobic003G186600 Sobic009G166650 Sobic009G166650 Sobic002G306500--Sobic009G166650 Sobic005G100500 Sobic005G100500 Sobic004G053100--Sobic005G100500 Sobic004G053100--Sobic003G107000 Sobic004G053100--Sobic002G403700 Sobic004G053100--Sobic001G365266 Sobic004G053100--Sobic002G306500 Sobic004G053100--Sobic001G221601 Sobic003G409500 Sobic003G409500 Sobic004G053100--Sobic003G409500 Sobic004G053100--Sobic009G166650 Sobic004G312000 Sobic004G312000 Sobic004G053100--Sobic004G312000 Sobic004G312400 Sobic004G312400 Sobic001G221601--Sobic004G312400 Sobic002G390700 Sobic002G390700 Sobic001G221601--Sobic002G390700 Sobic004G064700 Sobic004G064700 Sobic001G221601--Sobic004G064700 Sobic001G221601--Sobic009G166650 Sobic004G073800 Sobic004G073800 Sobic001G221601--Sobic004G073800 Sobic001G221601--Sobic003G107000 Sobic001G221601--Sobic010G213000 Sobic001G088400 Sobic001G088400 Sobic001G221601--Sobic001G088400 Sobic001G088000 Sobic001G088000 Sobic001G221601--Sobic001G088000 Sobic005G030600--Sobic002G306500 Sobic005G030600--Sobic003G107000 Sobic005G030600--Sobic001G365266 Sobic009G103300 Sobic009G103300 Sobic005G030600--Sobic009G103300 Sobic005G030600--Sobic004G053100 Sobic004G248300 Sobic004G248300 Sobic005G030600--Sobic004G248300 Sobic010G254700 Sobic010G254700 Sobic005G030600--Sobic010G254700 Sobic005G030600--Sobic003G186600 Sobic005G030600--Sobic005G100500 Sobic003G156700--Sobic002G306500 Sobic006G084201 Sobic006G084201 Sobic003G156700--Sobic006G084201 Sobic003G156700--Sobic001G365266 Sobic003G156700--Sobic002G180100 Sobic002G205000 Sobic002G205000 Sobic003G156700--Sobic002G205000 Sobic007G067900 Sobic007G067900 Sobic003G156700--Sobic007G067900 Sobic003G243100 Sobic003G243100 Sobic003G156700--Sobic003G243100 Sobic007G137101 Sobic007G137101 Sobic003G156700--Sobic007G137101 Sobic001G042700 Sobic001G042700 Sobic003G156700--Sobic001G042700 Sobic003G055400 Sobic003G055400 Sobic002G403700--Sobic003G055400 Sobic002G104600 Sobic002G104600 Sobic002G403700--Sobic002G104600 Sobic006G063800 Sobic006G063800 Sobic002G403700--Sobic006G063800 Sobic002G403700--Sobic003G409500 Sobic006G108500 Sobic006G108500 Sobic002G403700--Sobic006G108500 Sobic002G403700--Sobic005G100500 Sobic001G454700 Sobic001G454700 Sobic002G403700--Sobic001G454700 Sobic001G105000 Sobic001G105000 Sobic002G403700--Sobic001G105000 Sobic001G518050 Sobic001G518050 Sobic002G403700--Sobic001G518050 Sobic007G014100 Sobic007G014100 Sobic001G095432--Sobic007G014100 Sobic003G005500 Sobic003G005500 Sobic001G095432--Sobic003G005500 Sobic008G046200 Sobic008G046200 Sobic001G095432--Sobic008G046200 Sobic003G423800 Sobic003G423800 Sobic001G095432--Sobic003G423800 Sobic004G027150 Sobic004G027150 Sobic001G095432--Sobic004G027150 Sobic009G214500 Sobic009G214500 Sobic001G095432--Sobic009G214500 Sobic001G010500 Sobic001G010500 Sobic001G095432--Sobic001G010500 Sobic008G180200 Sobic008G180200 Sobic001G095432--Sobic008G180200 Sobic009G163400 Sobic009G163400 Sobic001G095432--Sobic009G163400 Sobic006G276900 Sobic006G276900 Sobic010G213000--Sobic006G276900 Sobic001G061400 Sobic001G061400 Sobic010G213000--Sobic001G061400 Sobic001G519100 Sobic001G519100 Sobic010G213000--Sobic001G519100 Sobic010G213000--Sobic007G067900 Sobic007G097100 Sobic007G097100 Sobic010G213000--Sobic007G097100 Sobic002G265200 Sobic002G265200 Sobic010G213000--Sobic002G265200 Sobic010G213000--Sobic001G088400 Sobic001G170301 Sobic001G170301 Sobic010G213000--Sobic001G170301 Sobic001G075700 Sobic001G075700 Sobic010G213000--Sobic001G075700 Sobic009G118500 Sobic009G118500 Sobic003G107000--Sobic009G118500 Sobic003G107000--Sobic001G221601 Sobic003G107000--Sobic002G306500 Sobic003G107000--Sobic004G053100 Sobic003G107000--Sobic005G030600 Sobic003G107000--Sobic010G213000 Sobic003G107000--Sobic006G276900 Sobic003G107000--Sobic007G067900 Sobic003G107000--Sobic002G403700
Octagon: transcription factors


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