Gene annotation
Transcriptome id Sobic.004G024500.3,Sobic.004G024500.2
Synonym Sb04g002180, CINV2
Functional annotation plant neutral invertase domain containing protein, expressed
UniProt A0A1Z5RLN1
Pfam PF12899
Panther DB PTHR31916 PTHR31916:SF15
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT4G09510 : cytosolic invertase 2
RAP-DB (Rice) LOC_Os02g03320.1 : plant neutral invertase domain containing protein, expressed
MaizeGDB (Corn) Zm00025a018799
Brachypodium PNT65781
Barley HORVU6Hr1G014540.1 , HORVU6Hr1G014540.2 , HORVU2Hr1G075690.13 , HORVU2Hr1G075690.12 , HORVU2Hr1G075690.14
Wheat TraesCS6D02G077600 , TraesCS6B02G112900 , TraesCS2B02G320900 , TraesCS6B02G222900 , TraesCS6B02G222900 , TraesCS6B02G222900 , TraesCS2A02G304200 , TraesCS6A02G084100 , TraesCS2A02G304200 , TraesCS2D02G302800 , TraesCS2A02G304200
Populus -


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cDNA sequences
Sobic.004G024500


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G024400 KH domain containing protein, putative, expressed K13162: poly(rC)-binding protein 2
2 Sobic.001G095100 response regulator receiver domain containing protein, expressed -
3 Sobic.007G070100 tentative name(PubMedID : 31536532)@core histone H2A/H2B/H3/H4, putative, expressed K08066: NFYC, nuclear transcription factor Y, gamma
4 Sobic.008G137700 XH domain containing protein, expressed -
5 Sobic.003G091300 seven in absentia protein family domain containing protein, expressed K04506: E3 ubiquitin-protein ligase SIAH1
6 Sobic.004G016250 - -
7 Sobic.006G116000 Glycerophosphoryl diester phosphodiesterase family protein (Os)(PubMedID : 27208977)@glycerophosphoryl diester phosphodiesterase family protein, putative, expressed -
8 Sobic.003G243100 expressed protein -
9 Sobic.007G121000 YDG/SRA domain containing protein, expressed K11420: [histone H3]-lysine9 N-trimethyltransferase EHMT
10 Sobic.003G156700 Up-reguralion under drought(PubMedID : 24916767)@expressed protein -
11 Sobic.002G309000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@ubiquitin fusion protein, putative, expressed K02927: RP-L40e, RPL40, ubiquitin-large subunit ribosomal protein L40e
12 Sobic.008G180400 DNA-binding protein-like, putative, expressed K10624: E3 ubiquitin-protein ligase RBBP6
13 Sobic.002G205000 ZOS9-06 - C2H2 zinc finger protein, expressed -
14 Sobic.001G132200 zinc finger C-x8-C-x5-C-x3-H type family protein, expressed -
15 Sobic.010G111750 - -
16 Sobic.003G224900 - -
17 Sobic.002G258000 homologous to AGL2 and AGL4: expression analysis and mapping data suggest that it is the ortholog of OsMADS24.(PubMedID : 9065695)@OsMADS8 - MADS-box family gene with MIKCc type-box, expressed -
18 Sobic.008G180200 expressed protein -
19 Sobic.008G188800 ankyrin repeat domain-containing protein, putative, expressed -
20 Sobic.001G137500 ankyrin, putative, expressed -


Gene co-expression network
sample Sobic004G024500 Sobic004G024500 Sobic004G024400 Sobic004G024400 Sobic004G024500--Sobic004G024400 Sobic001G095100 Sobic001G095100 Sobic004G024500--Sobic001G095100 Sobic007G070100 Sobic007G070100 Sobic004G024500--Sobic007G070100 Sobic008G137700 Sobic008G137700 Sobic004G024500--Sobic008G137700 Sobic003G091300 Sobic003G091300 Sobic004G024500--Sobic003G091300 Sobic004G016250 Sobic004G016250 Sobic004G024500--Sobic004G016250 Sobic006G116000 Sobic006G116000 Sobic004G024500--Sobic006G116000 Sobic003G243100 Sobic003G243100 Sobic004G024500--Sobic003G243100 Sobic007G121000 Sobic007G121000 Sobic004G024500--Sobic007G121000 Sobic003G088600 Sobic003G088600 Sobic004G024400--Sobic003G088600 Sobic004G024400--Sobic008G137700 Sobic006G112300 Sobic006G112300 Sobic004G024400--Sobic006G112300 Sobic006G271600 Sobic006G271600 Sobic004G024400--Sobic006G271600 Sobic010G194600 Sobic010G194600 Sobic004G024400--Sobic010G194600 Sobic001G137500 Sobic001G137500 Sobic004G024400--Sobic001G137500 Sobic001G419500 Sobic001G419500 Sobic004G024400--Sobic001G419500 Sobic003G300000 Sobic003G300000 Sobic004G024400--Sobic003G300000 Sobic003G006000 Sobic003G006000 Sobic004G024400--Sobic003G006000 Sobic001G095100--Sobic007G070100 Sobic004G054600 Sobic004G054600 Sobic001G095100--Sobic004G054600 Sobic001G095100--Sobic004G024500 Sobic001G454700 Sobic001G454700 Sobic001G095100--Sobic001G454700 Sobic009G128400 Sobic009G128400 Sobic001G095100--Sobic009G128400 Sobic007G107800 Sobic007G107800 Sobic001G095100--Sobic007G107800 Sobic006G244200 Sobic006G244200 Sobic001G095100--Sobic006G244200 Sobic001G332933 Sobic001G332933 Sobic001G095100--Sobic001G332933 Sobic003G224900 Sobic003G224900 Sobic001G095100--Sobic003G224900 Sobic007G070100--Sobic001G095100 Sobic007G070100--Sobic001G332933 Sobic002G408400 Sobic002G408400 Sobic007G070100--Sobic002G408400 Sobic007G070100--Sobic003G224900 Sobic008G057200 Sobic008G057200 Sobic007G070100--Sobic008G057200 Sobic003G384750 Sobic003G384750 Sobic007G070100--Sobic003G384750 Sobic008G104900 Sobic008G104900 Sobic007G070100--Sobic008G104900 Sobic010G103400 Sobic010G103400 Sobic007G070100--Sobic010G103400 Sobic007G070100--Sobic007G107800 Sobic008G137700--Sobic003G088600 Sobic002G053350 Sobic002G053350 Sobic008G137700--Sobic002G053350 Sobic008G137700--Sobic001G419500 Sobic002G178700 Sobic002G178700 Sobic008G137700--Sobic002G178700 Sobic008G137700--Sobic001G137500 Sobic008G137700--Sobic003G300000 Sobic004G234600 Sobic004G234600 Sobic008G137700--Sobic004G234600 Sobic008G137700--Sobic010G194600 Sobic008G137700--Sobic003G006000 Sobic010G111750 Sobic010G111750 Sobic003G091300--Sobic010G111750 Sobic001G288000 Sobic001G288000 Sobic003G091300--Sobic001G288000 Sobic003G091300--Sobic002G178700 Sobic003G091300--Sobic001G137500 Sobic003G091300--Sobic003G006000 Sobic002G258000 Sobic002G258000 Sobic003G091300--Sobic002G258000 Sobic003G091300--Sobic001G419500 Sobic002G205000 Sobic002G205000 Sobic003G091300--Sobic002G205000 Sobic004G031501 Sobic004G031501 Sobic003G091300--Sobic004G031501 Sobic008G188800 Sobic008G188800 Sobic004G016250--Sobic008G188800 Sobic001G128200 Sobic001G128200 Sobic004G016250--Sobic001G128200 Sobic007G127950 Sobic007G127950 Sobic004G016250--Sobic007G127950 Sobic003G007200 Sobic003G007200 Sobic004G016250--Sobic003G007200 Sobic001G439800 Sobic001G439800 Sobic004G016250--Sobic001G439800 Sobic010G013600 Sobic010G013600 Sobic004G016250--Sobic010G013600 Sobic004G016250--Sobic001G288000 Sobic003G013800 Sobic003G013800 Sobic004G016250--Sobic003G013800 Sobic009G125800 Sobic009G125800 Sobic004G016250--Sobic009G125800 Sobic010G247000 Sobic010G247000 Sobic006G116000--Sobic010G247000 Sobic003G002000 Sobic003G002000 Sobic006G116000--Sobic003G002000 Sobic006G014400 Sobic006G014400 Sobic006G116000--Sobic006G014400 Sobic006G116000--Sobic003G088600 Sobic009G136000 Sobic009G136000 Sobic006G116000--Sobic009G136000 Sobic006G116000--Sobic008G137700 Sobic006G116000--Sobic002G205000 Sobic001G175100 Sobic001G175100 Sobic006G116000--Sobic001G175100 Sobic009G243000 Sobic009G243000 Sobic006G116000--Sobic009G243000 Sobic001G456000 Sobic001G456000 Sobic003G243100--Sobic001G456000 Sobic002G078900 Sobic002G078900 Sobic003G243100--Sobic002G078900 Sobic002G344201 Sobic002G344201 Sobic003G243100--Sobic002G344201 Sobic001G459300 Sobic001G459300 Sobic003G243100--Sobic001G459300 Sobic003G243100--Sobic003G300000 Sobic003G092400 Sobic003G092400 Sobic003G243100--Sobic003G092400 Sobic010G048600 Sobic010G048600 Sobic003G243100--Sobic010G048600 Sobic001G459400 Sobic001G459400 Sobic003G243100--Sobic001G459400 Sobic007G121200 Sobic007G121200 Sobic003G243100--Sobic007G121200 Sobic007G121000--Sobic002G258000 Sobic007G121000--Sobic001G137500 Sobic007G121000--Sobic001G419500 Sobic007G121000--Sobic003G091300 Sobic007G121000--Sobic004G024400 Sobic007G121000--Sobic002G178700 Sobic007G121000--Sobic003G006000 Sobic007G121000--Sobic001G288000 Sobic001G457600 Sobic001G457600 Sobic007G121000--Sobic001G457600
Octagon: transcription factors


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