Gene annotation
Transcriptome id Sobic.008G019600.1
Synonym Sb08g001730
Functional annotation Mad3/BUB1 homology region 1 domain containing protein, expressed
UniProt C5YQQ1
Pfam PF08311
Panther DB PTHR14030 PTHR14030:SF2
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0007094; mitotic spindle assembly checkpoint


Orthologs (automatic annotation)
TAIR AT5G05510 : Mad3/BUB1 homology region 1
RAP-DB (Rice) LOC_Os11g03460.1 : Mad3/BUB1 homology region 1 domain containing protein, expressed
MaizeGDB (Corn) Zm00025a053734
Brachypodium KQJ92480
Barley HORVU7Hr1G029580.2 , HORVU7Hr1G029580.3 , HORVU7Hr1G029580.4 , HORVU5Hr1G045460.2 , HORVU5Hr1G045460.3 , HORVU5Hr1G045460.1 , HORVU5Hr1G045460.4 , HORVU7Hr1G029580.1
Wheat TraesCS5B02G141100 , TraesCS5B02G141100 , TraesCSU02G188700 , TraesCS5D02G149700 , TraesCS5A02G142400
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G159800 KIP1, putative, expressed -
2 Sobic.004G203800 steroid nuclear receptor, ligand-binding, putative, expressed -
3 Sobic.010G189600 MLO domain containing protein, putative, expressed K08472: mlo protein
4 Sobic.009G073400 galactosyltransferase family protein, putative, expressed -
5 Sobic.006G215200 caltractin, putative, expressed -
6 Sobic.003G237300 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@OsFBX20 - F-box domain containing protein, expressed -
7 Sobic.002G347900 GDP-fucose protein-O-fucosyltransferase 2, putative, expressed K03691: peptide-O-fucosyltransferase
8 Sobic.010G054100 SHR5-receptor-like kinase, putative, expressed -
9 Sobic.009G226800 kinesin motor domain containing protein, putative, expressed K10403: kinesin family member 22
10 Sobic.007G096800 UAA transporter family domain containing protein, expressed K15272: solute carrier family 35 (UDP-sugar transporter), member A1/2/3
11 Sobic.004G095200 Peptidase family C50, putative, expressed K02365: separase
12 Sobic.002G426400 OsLonP3 - Putative Lon protease homologue, expressed K08675: PRSS15, ATP-dependent Lon protease
13 Sobic.006G089900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@pentatricopeptide, putative, expressed -
14 Sobic.003G007000 FAR1 family protein, expressed -
15 Sobic.003G369200 POLA1 - Putative DNA polymerase alpha catalytic subunit, expressed K02320: DNA polymerase alpha subunit A
16 Sobic.002G383100 expressed protein -
17 Sobic.005G110535 - K02540: DNA replication licensing factor MCM2
18 Sobic.010G252700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@cullin family domain containing protein, putative, expressed K03349: anaphase-promoting complex subunit 2
19 Sobic.004G020600 ATXR, putative, expressed -
20 Sobic.004G249100 spotted leaf 11, putative, expressed -


Gene co-expression network
sample Sobic008G019600 Sobic008G019600 Sobic001G159800 Sobic001G159800 Sobic008G019600--Sobic001G159800 Sobic004G203800 Sobic004G203800 Sobic008G019600--Sobic004G203800 Sobic010G189600 Sobic010G189600 Sobic008G019600--Sobic010G189600 Sobic009G073400 Sobic009G073400 Sobic008G019600--Sobic009G073400 Sobic006G215200 Sobic006G215200 Sobic008G019600--Sobic006G215200 Sobic003G237300 Sobic003G237300 Sobic008G019600--Sobic003G237300 Sobic002G347900 Sobic002G347900 Sobic008G019600--Sobic002G347900 Sobic010G054100 Sobic010G054100 Sobic008G019600--Sobic010G054100 Sobic009G226800 Sobic009G226800 Sobic008G019600--Sobic009G226800 Sobic010G090500 Sobic010G090500 Sobic001G159800--Sobic010G090500 Sobic001G437500 Sobic001G437500 Sobic001G159800--Sobic001G437500 Sobic009G061000 Sobic009G061000 Sobic001G159800--Sobic009G061000 Sobic009G206500 Sobic009G206500 Sobic001G159800--Sobic009G206500 Sobic001G159800--Sobic009G073400 Sobic003G017500 Sobic003G017500 Sobic001G159800--Sobic003G017500 Sobic001G196000 Sobic001G196000 Sobic001G159800--Sobic001G196000 Sobic006G173200 Sobic006G173200 Sobic001G159800--Sobic006G173200 Sobic001G507200 Sobic001G507200 Sobic001G159800--Sobic001G507200 Sobic010G254700 Sobic010G254700 Sobic004G203800--Sobic010G254700 Sobic003G107000 Sobic003G107000 Sobic004G203800--Sobic003G107000 Sobic010G213000 Sobic010G213000 Sobic004G203800--Sobic010G213000 Sobic001G088400 Sobic001G088400 Sobic004G203800--Sobic001G088400 Sobic002G198801 Sobic002G198801 Sobic004G203800--Sobic002G198801 Sobic001G026400 Sobic001G026400 Sobic004G203800--Sobic001G026400 Sobic001G292500 Sobic001G292500 Sobic004G203800--Sobic001G292500 Sobic002G306500 Sobic002G306500 Sobic004G203800--Sobic002G306500 Sobic003G043900 Sobic003G043900 Sobic004G203800--Sobic003G043900 Sobic010G189600--Sobic003G017500 Sobic003G277900 Sobic003G277900 Sobic010G189600--Sobic003G277900 Sobic001G337400 Sobic001G337400 Sobic010G189600--Sobic001G337400 Sobic007G187400 Sobic007G187400 Sobic010G189600--Sobic007G187400 Sobic005G204700 Sobic005G204700 Sobic010G189600--Sobic005G204700 Sobic004G051300 Sobic004G051300 Sobic010G189600--Sobic004G051300 Sobic002G162000 Sobic002G162000 Sobic010G189600--Sobic002G162000 Sobic001G108400 Sobic001G108400 Sobic010G189600--Sobic001G108400 Sobic008G015200 Sobic008G015200 Sobic010G189600--Sobic008G015200 Sobic009G073400--Sobic009G061000 Sobic003G345200 Sobic003G345200 Sobic009G073400--Sobic003G345200 Sobic009G073400--Sobic003G017500 Sobic009G073400--Sobic006G173200 Sobic009G073400--Sobic001G159800 Sobic006G172200 Sobic006G172200 Sobic009G073400--Sobic006G172200 Sobic004G146300 Sobic004G146300 Sobic009G073400--Sobic004G146300 Sobic009G073400--Sobic009G206500 Sobic009G073400--Sobic010G090500 Sobic005G164900 Sobic005G164900 Sobic006G215200--Sobic005G164900 Sobic002G113600 Sobic002G113600 Sobic006G215200--Sobic002G113600 Sobic001G352300 Sobic001G352300 Sobic006G215200--Sobic001G352300 Sobic004G020600 Sobic004G020600 Sobic006G215200--Sobic004G020600 Sobic002G142200 Sobic002G142200 Sobic006G215200--Sobic002G142200 Sobic010G017400 Sobic010G017400 Sobic006G215200--Sobic010G017400 Sobic010G008900 Sobic010G008900 Sobic006G215200--Sobic010G008900 Sobic004G339500 Sobic004G339500 Sobic006G215200--Sobic004G339500 Sobic007G168900 Sobic007G168900 Sobic006G215200--Sobic007G168900 Sobic004G232900 Sobic004G232900 Sobic003G237300--Sobic004G232900 Sobic004G339800 Sobic004G339800 Sobic003G237300--Sobic004G339800 Sobic002G214200 Sobic002G214200 Sobic003G237300--Sobic002G214200 Sobic007G186700 Sobic007G186700 Sobic003G237300--Sobic007G186700 Sobic005G176600 Sobic005G176600 Sobic003G237300--Sobic005G176600 Sobic003G045650 Sobic003G045650 Sobic003G237300--Sobic003G045650 Sobic002G081800 Sobic002G081800 Sobic003G237300--Sobic002G081800 Sobic005G095500 Sobic005G095500 Sobic003G237300--Sobic005G095500 Sobic010G018600 Sobic010G018600 Sobic003G237300--Sobic010G018600 Sobic002G347900--Sobic009G061000 Sobic006G081000 Sobic006G081000 Sobic002G347900--Sobic006G081000 Sobic002G347900--Sobic001G437500 Sobic001G154300 Sobic001G154300 Sobic002G347900--Sobic001G154300 Sobic003G094600 Sobic003G094600 Sobic002G347900--Sobic003G094600 Sobic007G173000 Sobic007G173000 Sobic002G347900--Sobic007G173000 Sobic002G276600 Sobic002G276600 Sobic002G347900--Sobic002G276600 Sobic002G347900--Sobic009G073400 Sobic008G174966 Sobic008G174966 Sobic002G347900--Sobic008G174966 Sobic004G270800 Sobic004G270800 Sobic010G054100--Sobic004G270800 Sobic010G067800 Sobic010G067800 Sobic010G054100--Sobic010G067800 Sobic010G054100--Sobic006G172200 Sobic010G054100--Sobic009G073400 Sobic010G054100--Sobic003G017500 Sobic007G139500 Sobic007G139500 Sobic010G054100--Sobic007G139500 Sobic002G383100 Sobic002G383100 Sobic010G054100--Sobic002G383100 Sobic010G054100--Sobic001G159800 Sobic008G127550 Sobic008G127550 Sobic010G054100--Sobic008G127550 Sobic004G197400 Sobic004G197400 Sobic009G226800--Sobic004G197400 Sobic004G331600 Sobic004G331600 Sobic009G226800--Sobic004G331600 Sobic005G144600 Sobic005G144600 Sobic009G226800--Sobic005G144600 Sobic001G070300 Sobic001G070300 Sobic009G226800--Sobic001G070300 Sobic010G054600 Sobic010G054600 Sobic009G226800--Sobic010G054600 Sobic010G147700 Sobic010G147700 Sobic009G226800--Sobic010G147700 Sobic001G456500 Sobic001G456500 Sobic009G226800--Sobic001G456500 Sobic006G116500 Sobic006G116500 Sobic009G226800--Sobic006G116500 Sobic010G274000 Sobic010G274000 Sobic009G226800--Sobic010G274000
Octagon: transcription factors


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