Gene annotation
Transcriptome id Sobic.002G426400.2,Sobic.002G426400.1
Synonym Sb02g043690, LON_ARA_ARA, LON1
Functional annotation OsLonP3 - Putative Lon protease homologue, expressed
UniProt C5X6D0 , A0A1W0W817
Pfam PF00004 PF02190 PF05362
Panther DB PTHR10046 PTHR10046:SF44
NCBI CDD -
KEGG Orthology K08675; PRSS15, ATP-dependent Lon protease
Gene Ontology GO:0005524; ATP binding GO:0006508proteolysis GO:0004176ATP-dependent peptidase activity GO:0004252serine-type endopeptidase activity


Orthologs (automatic annotation)
TAIR AT5G26860 : lon protease 1
RAP-DB (Rice) LOC_Os07g48960.1 : OsLonP3 - Putative Lon protease homologue, expressed
MaizeGDB (Corn) Zm00025a002121 , Zm00025a015483 , Zm00025a049234
Brachypodium KQK14535
Barley HORVU2Hr1G016000.3 , HORVU2Hr1G016000.2 , HORVU2Hr1G016000.1 , HORVU2Hr1G016000.6 , HORVU2Hr1G016000.5 , HORVU2Hr1G016000.4 , HORVU1Hr1G055380.1
Wheat TraesCS2D02G094000 , TraesCS2B02G110800 , TraesCS2B02G110800 , TraesCS2A02G095500
Populus -


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cDNA sequences
Sobic.002G426400


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.009G041800 PPR repeat domain containing protein, putative, expressed -
2 Sobic.004G212100 PPR repeat domain containing protein, putative, expressed -
3 Sobic.003G130000 outer mitochondrial membrane porin, putative, expressed K11518: mitochondrial import receptor subunit TOM40
4 Sobic.002G423500 T-complex protein, putative, expressed K09498: T-complex protein 1 subunit zeta
5 Sobic.002G110400 pentatricopeptide domain containing protein, putative, expressed -
6 Sobic.010G252700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@cullin family domain containing protein, putative, expressed K03349: anaphase-promoting complex subunit 2
7 Sobic.001G024000 expressed protein K14844: pumilio homology domain family member 6
8 Sobic.001G522000 mitochondrial carrier protein, putative, expressed K05863: SLC25A4S, solute carrier family 25 (mitochondrial adenine nucleotide translocator), member 4/5/6/31
9 Sobic.004G034300 transducin family protein, putative, expressed -
10 Sobic.006G173200 beige/BEACH domain containing protein, expressed -
11 Sobic.006G024700 pumilio-family RNA binding repeat containing protein, expressed -
12 Sobic.001G460500 T-complex protein, putative, expressed K09495: CCT3, T-complex protein 1 subunit gamma
13 Sobic.002G367800 PPR repeat domain containing protein, putative, expressed -
14 Sobic.008G179000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@pentatricopeptide, putative, expressed -
15 Sobic.007G123100 PPR repeat domain containing protein, putative, expressed -
16 Sobic.008G000600 RNase P subunit p30, putative, expressed K03539: RPP1, ribonuclease P/MRP protein subunit RPP1
17 Sobic.005G098000 serpin domain containing protein, putative, expressed K13963: serpin B
18 Sobic.009G105900 amino acid permease family protein, putative, expressed K14427: SLC12A4_6, solute carrier family 12 (potassium/chloride transporter), member 4/6
19 Sobic.005G163700 T-complex protein, putative, expressed K09500: T-complex protein 1 subunit theta
20 Sobic.004G215700 RAN GTPase-activating protein 1, putative, expressed K14319: Ran GTPase-activating protein 1


Gene co-expression network
sample Sobic002G426400 Sobic002G426400 Sobic009G041800 Sobic009G041800 Sobic002G426400--Sobic009G041800 Sobic004G212100 Sobic004G212100 Sobic002G426400--Sobic004G212100 Sobic003G130000 Sobic003G130000 Sobic002G426400--Sobic003G130000 Sobic002G423500 Sobic002G423500 Sobic002G426400--Sobic002G423500 Sobic002G110400 Sobic002G110400 Sobic002G426400--Sobic002G110400 Sobic010G252700 Sobic010G252700 Sobic002G426400--Sobic010G252700 Sobic001G024000 Sobic001G024000 Sobic002G426400--Sobic001G024000 Sobic001G522000 Sobic001G522000 Sobic002G426400--Sobic001G522000 Sobic004G034300 Sobic004G034300 Sobic002G426400--Sobic004G034300 Sobic009G041800--Sobic003G130000 Sobic009G041800--Sobic004G212100 Sobic001G011000 Sobic001G011000 Sobic009G041800--Sobic001G011000 Sobic002G367800 Sobic002G367800 Sobic009G041800--Sobic002G367800 Sobic001G167500 Sobic001G167500 Sobic009G041800--Sobic001G167500 Sobic001G413100 Sobic001G413100 Sobic009G041800--Sobic001G413100 Sobic001G268300 Sobic001G268300 Sobic009G041800--Sobic001G268300 Sobic003G113400 Sobic003G113400 Sobic009G041800--Sobic003G113400 Sobic010G134100 Sobic010G134100 Sobic009G041800--Sobic010G134100 Sobic004G212100--Sobic002G367800 Sobic004G212100--Sobic001G011000 Sobic004G212100--Sobic009G041800 Sobic003G388900 Sobic003G388900 Sobic004G212100--Sobic003G388900 Sobic002G070300 Sobic002G070300 Sobic004G212100--Sobic002G070300 Sobic001G161700 Sobic001G161700 Sobic004G212100--Sobic001G161700 Sobic004G212100--Sobic004G034300 Sobic004G212100--Sobic001G522000 Sobic001G490500 Sobic001G490500 Sobic004G212100--Sobic001G490500 Sobic003G130000--Sobic009G041800 Sobic003G130000--Sobic001G167500 Sobic003G235700 Sobic003G235700 Sobic003G130000--Sobic003G235700 Sobic003G130000--Sobic010G134100 Sobic006G251600 Sobic006G251600 Sobic003G130000--Sobic006G251600 Sobic003G205400 Sobic003G205400 Sobic003G130000--Sobic003G205400 Sobic003G008600 Sobic003G008600 Sobic003G130000--Sobic003G008600 Sobic005G098000 Sobic005G098000 Sobic003G130000--Sobic005G098000 Sobic003G130000--Sobic001G268300 Sobic005G163700 Sobic005G163700 Sobic002G423500--Sobic005G163700 Sobic004G047200 Sobic004G047200 Sobic002G423500--Sobic004G047200 Sobic002G014400 Sobic002G014400 Sobic002G423500--Sobic002G014400 Sobic001G460500 Sobic001G460500 Sobic002G423500--Sobic001G460500 Sobic004G326600 Sobic004G326600 Sobic002G423500--Sobic004G326600 Sobic004G215700 Sobic004G215700 Sobic002G423500--Sobic004G215700 Sobic002G423500--Sobic001G522000 Sobic006G041100 Sobic006G041100 Sobic002G423500--Sobic006G041100 Sobic001G467100 Sobic001G467100 Sobic002G423500--Sobic001G467100 Sobic008G083400 Sobic008G083400 Sobic002G110400--Sobic008G083400 Sobic002G110400--Sobic002G426400 Sobic002G110400--Sobic010G252700 Sobic001G149100 Sobic001G149100 Sobic002G110400--Sobic001G149100 Sobic006G208400 Sobic006G208400 Sobic002G110400--Sobic006G208400 Sobic008G179000 Sobic008G179000 Sobic002G110400--Sobic008G179000 Sobic002G110400--Sobic006G251600 Sobic002G110400--Sobic001G460500 Sobic005G059400 Sobic005G059400 Sobic002G110400--Sobic005G059400 Sobic010G252700--Sobic008G179000 Sobic007G123100 Sobic007G123100 Sobic010G252700--Sobic007G123100 Sobic009G052100 Sobic009G052100 Sobic010G252700--Sobic009G052100 Sobic002G362200 Sobic002G362200 Sobic010G252700--Sobic002G362200 Sobic010G252700--Sobic001G149100 Sobic008G031200 Sobic008G031200 Sobic010G252700--Sobic008G031200 Sobic008G090000 Sobic008G090000 Sobic010G252700--Sobic008G090000 Sobic006G071628 Sobic006G071628 Sobic010G252700--Sobic006G071628 Sobic010G250800 Sobic010G250800 Sobic010G252700--Sobic010G250800 Sobic004G215900 Sobic004G215900 Sobic001G024000--Sobic004G215900 Sobic010G205900 Sobic010G205900 Sobic001G024000--Sobic010G205900 Sobic008G111600 Sobic008G111600 Sobic001G024000--Sobic008G111600 Sobic009G246500 Sobic009G246500 Sobic001G024000--Sobic009G246500 Sobic008G068100 Sobic008G068100 Sobic001G024000--Sobic008G068100 Sobic003G412000 Sobic003G412000 Sobic001G024000--Sobic003G412000 Sobic008G049100 Sobic008G049100 Sobic001G024000--Sobic008G049100 Sobic003G123200 Sobic003G123200 Sobic001G024000--Sobic003G123200 Sobic002G003300 Sobic002G003300 Sobic001G024000--Sobic002G003300 Sobic001G522000--Sobic002G367800 Sobic001G522000--Sobic002G423500 Sobic001G522000--Sobic001G490500 Sobic001G522000--Sobic006G041100 Sobic001G522000--Sobic003G388900 Sobic001G522000--Sobic003G205400 Sobic002G402500 Sobic002G402500 Sobic001G522000--Sobic002G402500 Sobic006G265600 Sobic006G265600 Sobic001G522000--Sobic006G265600 Sobic001G117800 Sobic001G117800 Sobic001G522000--Sobic001G117800 Sobic004G336300 Sobic004G336300 Sobic004G034300--Sobic004G336300 Sobic010G178600 Sobic010G178600 Sobic004G034300--Sobic010G178600 Sobic002G070600 Sobic002G070600 Sobic004G034300--Sobic002G070600 Sobic008G072200 Sobic008G072200 Sobic004G034300--Sobic008G072200 Sobic005G059500 Sobic005G059500 Sobic004G034300--Sobic005G059500 Sobic009G118900 Sobic009G118900 Sobic004G034300--Sobic009G118900 Sobic003G334700 Sobic003G334700 Sobic004G034300--Sobic003G334700 Sobic004G034300--Sobic004G212100 Sobic001G012900 Sobic001G012900 Sobic004G034300--Sobic001G012900
Octagon: transcription factors


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