Gene annotation
Transcriptome id Sobic.005G179500.1
Synonym Sb05g023873
Functional annotation OsFBX291 - F-box domain containing protein, expressed
UniProt A0A1Z5RJ73
Pfam PF03478
Panther DB PTHR33110 PTHR33110:SF3
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G55150 : Protein of unknown function (DUF295)
RAP-DB (Rice) LOC_Os01g34630.1 : retrotransposon protein, putative, Ty1-copia subclass, expressed
MaizeGDB (Corn) -
Brachypodium KQJ95858
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G203700 hypothetical protein -
2 Sobic.003G418500 OsGrx_C6 - glutaredoxin subgroup III, expressed K03676: grxC, GLRX, glutaredoxin 3
3 Sobic.001G128500 LTPL73 - Protease inhibitor/seed storage/LTP family protein precursor, expressed -
4 Sobic.002G384700 40S ribosomal protein S9-2, putative, expressed K02997: RP-S9e, small subunit ribosomal protein S9e
5 Sobic.003G301600 heavy metal-associated domain containing protein, expressed -
6 Sobic.009G187200 UDP-glucoronosyl and UDP-glucosyl transferase domain containing protein, expressed -
7 Sobic.008G172600 ATCHX, putative, expressed -
8 Sobic.001G400900 expressed high in CK60 (an inefficient nitrogen user)(PubMedID : 28697783)@SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@pathogenesis-related Bet v I family protein, putative, expressed -
9 Sobic.005G183100 sulfotransferase domain containing protein, expressed -
10 Sobic.005G177600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence./late senescence marker during developmental senescence(PubMedID : 27586543)@glycosyl hydrolase, putative, expressed K01183: chitinase
11 Sobic.004G045400 60S ribosomal protein L37a, putative, expressed K02921: RP-L37Ae, large subunit ribosomal protein L37Ae
12 Sobic.003G156200 cytochrome P450, putative, expressed -
13 Sobic.003G016100 expressed protein -
14 Sobic.004G185100 NADPH-dependent FMN reductase domain containing protein, expressed K03809: NAD(P)H dehydrogenase (quinone)
15 Sobic.002G329800 expressed protein -
16 Sobic.002G318100 expressed protein -
17 Sobic.008G158800 LTPL112 - Protease inhibitor/seed storage/LTP family protein precursor, expressed -
18 Sobic.009G231000 - -
19 Sobic.003G026400 aquaporin protein, putative, expressed K09874: aquaporin NIP
20 Sobic.010G156500 expressed protein -


Gene co-expression network
sample Sobic005G179500 Sobic005G179500 Sobic002G203700 Sobic002G203700 Sobic005G179500--Sobic002G203700 Sobic003G418500 Sobic003G418500 Sobic005G179500--Sobic003G418500 Sobic001G128500 Sobic001G128500 Sobic005G179500--Sobic001G128500 Sobic002G384700 Sobic002G384700 Sobic005G179500--Sobic002G384700 Sobic003G301600 Sobic003G301600 Sobic005G179500--Sobic003G301600 Sobic009G187200 Sobic009G187200 Sobic005G179500--Sobic009G187200 Sobic008G172600 Sobic008G172600 Sobic005G179500--Sobic008G172600 Sobic001G400900 Sobic001G400900 Sobic005G179500--Sobic001G400900 Sobic005G183100 Sobic005G183100 Sobic005G179500--Sobic005G183100 Sobic003G156200 Sobic003G156200 Sobic002G203700--Sobic003G156200 Sobic002G203700--Sobic003G301600 Sobic004G313100 Sobic004G313100 Sobic002G203700--Sobic004G313100 Sobic002G203700--Sobic005G183100 Sobic002G057900 Sobic002G057900 Sobic002G203700--Sobic002G057900 Sobic001G317000 Sobic001G317000 Sobic002G203700--Sobic001G317000 Sobic002G034800 Sobic002G034800 Sobic002G203700--Sobic002G034800 Sobic002G329800 Sobic002G329800 Sobic002G203700--Sobic002G329800 Sobic010G213700 Sobic010G213700 Sobic002G203700--Sobic010G213700 Sobic002G042000 Sobic002G042000 Sobic003G418500--Sobic002G042000 Sobic006G101300 Sobic006G101300 Sobic003G418500--Sobic006G101300 Sobic005G177600 Sobic005G177600 Sobic003G418500--Sobic005G177600 Sobic008G158800 Sobic008G158800 Sobic003G418500--Sobic008G158800 Sobic006G234900 Sobic006G234900 Sobic003G418500--Sobic006G234900 Sobic004G169300 Sobic004G169300 Sobic003G418500--Sobic004G169300 Sobic003G364300 Sobic003G364300 Sobic003G418500--Sobic003G364300 Sobic010G156500 Sobic010G156500 Sobic003G418500--Sobic010G156500 Sobic002G010900 Sobic002G010900 Sobic003G418500--Sobic002G010900 Sobic001G128500--Sobic009G187200 Sobic004G046200 Sobic004G046200 Sobic001G128500--Sobic004G046200 Sobic004G202400 Sobic004G202400 Sobic001G128500--Sobic004G202400 Sobic001G128500--Sobic008G172600 Sobic006G197100 Sobic006G197100 Sobic001G128500--Sobic006G197100 Sobic006G199800 Sobic006G199800 Sobic001G128500--Sobic006G199800 Sobic003G084400 Sobic003G084400 Sobic001G128500--Sobic003G084400 Sobic003G053400 Sobic003G053400 Sobic001G128500--Sobic003G053400 Sobic002G003800 Sobic002G003800 Sobic001G128500--Sobic002G003800 Sobic002G384700--Sobic008G172600 Sobic004G045400 Sobic004G045400 Sobic002G384700--Sobic004G045400 Sobic008G027600 Sobic008G027600 Sobic002G384700--Sobic008G027600 Sobic001G114900 Sobic001G114900 Sobic002G384700--Sobic001G114900 Sobic006G158400 Sobic006G158400 Sobic002G384700--Sobic006G158400 Sobic010G211600 Sobic010G211600 Sobic002G384700--Sobic010G211600 Sobic003G060000 Sobic003G060000 Sobic002G384700--Sobic003G060000 Sobic002G366600 Sobic002G366600 Sobic002G384700--Sobic002G366600 Sobic010G205400 Sobic010G205400 Sobic002G384700--Sobic010G205400 Sobic003G301600--Sobic002G203700 Sobic003G301600--Sobic003G156200 Sobic010G259500 Sobic010G259500 Sobic003G301600--Sobic010G259500 Sobic003G417700 Sobic003G417700 Sobic003G301600--Sobic003G417700 Sobic005G033900 Sobic005G033900 Sobic003G301600--Sobic005G033900 Sobic003G364000 Sobic003G364000 Sobic003G301600--Sobic003G364000 Sobic001G433900 Sobic001G433900 Sobic003G301600--Sobic001G433900 Sobic003G301600--Sobic010G156500 Sobic010G088700 Sobic010G088700 Sobic003G301600--Sobic010G088700 Sobic009G187200--Sobic008G172600 Sobic009G187200--Sobic004G046200 Sobic006G044100 Sobic006G044100 Sobic009G187200--Sobic006G044100 Sobic009G187200--Sobic001G128500 Sobic010G067400 Sobic010G067400 Sobic009G187200--Sobic010G067400 Sobic003G016100 Sobic003G016100 Sobic009G187200--Sobic003G016100 Sobic003G255200 Sobic003G255200 Sobic009G187200--Sobic003G255200 Sobic001G503100 Sobic001G503100 Sobic009G187200--Sobic001G503100 Sobic003G255500 Sobic003G255500 Sobic009G187200--Sobic003G255500 Sobic008G172600--Sobic009G187200 Sobic008G172600--Sobic003G255200 Sobic002G004900 Sobic002G004900 Sobic008G172600--Sobic002G004900 Sobic008G172600--Sobic004G046200 Sobic008G172600--Sobic006G044100 Sobic003G280200 Sobic003G280200 Sobic008G172600--Sobic003G280200 Sobic001G325400 Sobic001G325400 Sobic008G172600--Sobic001G325400 Sobic008G172600--Sobic001G503100 Sobic002G125700 Sobic002G125700 Sobic008G172600--Sobic002G125700 Sobic001G400900--Sobic003G156200 Sobic002G415100 Sobic002G415100 Sobic001G400900--Sobic002G415100 Sobic001G401000 Sobic001G401000 Sobic001G400900--Sobic001G401000 Sobic001G400900--Sobic002G203700 Sobic001G400900--Sobic005G183100 Sobic001G400900--Sobic003G417700 Sobic001G400900--Sobic004G313100 Sobic010G239300 Sobic010G239300 Sobic001G400900--Sobic010G239300 Sobic001G400900--Sobic003G280200 Sobic005G183100--Sobic002G366600 Sobic005G183100--Sobic002G415100 Sobic005G183100--Sobic003G255200 Sobic007G025500 Sobic007G025500 Sobic005G183100--Sobic007G025500 Sobic009G231000 Sobic009G231000 Sobic005G183100--Sobic009G231000 Sobic005G183100--Sobic004G046200 Sobic003G062600 Sobic003G062600 Sobic005G183100--Sobic003G062600 Sobic010G259600 Sobic010G259600 Sobic005G183100--Sobic010G259600 Sobic005G183100--Sobic010G213700
Octagon: transcription factors


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